Basic Information

Insect: Zaprionus ornatus
Gene Symbol: -
Assembly: GCA_018904035.1
Location: JAEIFZ010000238.1:6319559-6323289[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.079 6.1 7.5 5.6 2 23 351 373 350 373 0.96

2 18 1.8 1.4e+02 3.2 0.0 1 23 380 405 380 405 0.93

3 18 0.016 1.2 9.7 1.8 2 23 416 437 416 437 0.93

4 18 5 3.9e+02 1.8 3.0 2 17 448 463 447 474 0.75

5 18 0.022 1.7 9.2 0.3 3 23 507 527 505 527 0.95

6 18 0.00023 0.018 15.4 0.3 1 23 535 558 535 558 0.98

7 18 0.00035 0.027 14.9 0.3 2 23 563 584 562 584 0.97

8 18 4.3 3.3e+02 2.0 0.2 1 20 592 611 592 613 0.82

9 18 0.0006 0.047 14.1 0.4 1 22 632 653 632 656 0.90

10 18 0.79 61 4.3 0.5 3 21 663 681 663 682 0.90

11 18 0.01 0.78 10.3 0.7 1 23 701 726 701 726 0.96

12 18 0.01 0.8 10.3 1.4 2 23 742 764 741 764 0.93

13 18 0.0054 0.42 11.1 0.4 2 23 770 792 769 792 0.92

14 18 0.042 3.3 8.3 0.2 2 23 796 818 795 818 0.95

15 18 8.2e-06 0.00063 20.0 2.5 1 23 824 846 824 846 0.99

16 18 0.035 2.7 8.6 0.9 1 23 850 873 850 873 0.93

17 18 7.4e-06 0.00057 20.2 0.5 1 23 879 902 879 902 0.97

18 18 0.0073 0.56 10.7 0.4 1 23 906 934 906 934 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.079	6.1	7.5	5.6	2	23	351	373	350	373	0.96
2	18	1.8	1.4e+02	3.2	0.0	1	23	380	405	380	405	0.93
3	18	0.016	1.2	9.7	1.8	2	23	416	437	416	437	0.93
4	18	5	3.9e+02	1.8	3.0	2	17	448	463	447	474	0.75
5	18	0.022	1.7	9.2	0.3	3	23	507	527	505	527	0.95
6	18	0.00023	0.018	15.4	0.3	1	23	535	558	535	558	0.98
7	18	0.00035	0.027	14.9	0.3	2	23	563	584	562	584	0.97
8	18	4.3	3.3e+02	2.0	0.2	1	20	592	611	592	613	0.82
9	18	0.0006	0.047	14.1	0.4	1	22	632	653	632	656	0.90
10	18	0.79	61	4.3	0.5	3	21	663	681	663	682	0.90
11	18	0.01	0.78	10.3	0.7	1	23	701	726	701	726	0.96
12	18	0.01	0.8	10.3	1.4	2	23	742	764	741	764	0.93
13	18	0.0054	0.42	11.1	0.4	2	23	770	792	769	792	0.92
14	18	0.042	3.3	8.3	0.2	2	23	796	818	795	818	0.95
15	18	8.2e-06	0.00063	20.0	2.5	1	23	824	846	824	846	0.99
16	18	0.035	2.7	8.6	0.9	1	23	850	873	850	873	0.93
17	18	7.4e-06	0.00057	20.2	0.5	1	23	879	902	879	902	0.97
18	18	0.0073	0.56	10.7	0.4	1	23	906	934	906	934	0.89

Sequence Information

Coding Sequence: ATGTCGGAAAATTCGAAAATAAATAGCGAAACTGGGCCTAGCTGCCTGCATTGCAGAGTGCACAATTCAAAGCAGCCGTATCAGGAGATATTCGATGAGGTGGGCGTGGAAATCGAACTGGCCGATCTGCTGGCTAAATATTTTCAGATAAATGTCAAACCAGATCCTCAAAAGCCTCAACTGCTGTGCCAAGAGTGCGTAAAAACGCTAATTCGGTTCTTCGACATCGACGAATTGCAGCGTGAACAGGATGCCGCTAGCAAAAAGGCGCCACAAATTGTGGCAGACCCTGTTTCTGTGGCCACGCCCGTTGCCAAGAAGGAAACAAAGTCAACCGGTAAAAAACAGACGCCGCCGCCACCAAAAGCAACGGTTGAGTCAAAAACATTACCCGTTGCTTCCAAAAAGTTGTCGCCTCCAGTCGATTTGCAGCCTGCAAAGTCTGGGCCTAGTGTAGCTCCAACACAAGCGATTTCCATACGCATAACCAGAGCAAAATCTCAAGCTACGCTGCCAAAGCGTTTGCAGATTGCACCCAAGGGAAAAGCTAGTGAAACTGCTGCGGGAAAAGGTAGGAAAGCTAAAGAAGGCGACCAGGAGCAGATTAGTGCTTTGATACGTGACATACTCGACGACGAGGAGACGCCGCCAGATGAGAAATTCGCTGAGGCAGCTGCCACAGTGCGTCAACTGGAGACGCAGGCCGTCGAGGAGCAGGAACAGGAACAAGAACAGGAGCAGGAGACCGTTGCCGAGGAGTTGCATGAGGAGCAGCAACAAGAGCCCGAAAATGGAGACGAATTGGAGTTCTTAGTTGAGCAAGATGATGAAACGTCTGAATCTGAGCAACGCCAGTTTAAAGTGGTTAAGAAGGCATACCCGGATGATTCGCAGTCGGCAAACGAAACACAGAGCGAGGATGAGTCCCTTAAAGTGGAACCATTCAATTTCGTATTAATCAAGGAATCGGATGGCATTGACGACTTGTTTGAGTACCTGGGAACTGTGGTTAAGACATGCTTCGAGACTCTCACCTTTGATTGGGCCACTGTGTGCCGGCACTGCTCCTTGAAATGCAGTAAATACGAGAACCTACTGAACCATATGCTCAAGCGTCATCAGCTACCGCAGGAACGCTTCAAGTGTCCCATAGATGGCTGCACAGCGGAGTTGAAAGGCCGTAAATATCTGGCCATGCACTTGGTTGTGCTGCATGCACCAGTGGCAGACATTCCCATCTATGGCTCTTGTCCCGAGTGCAACATGACCTTTTCCAACATATTGCAGTACAACAAGCATTCATGCGCCCATGTGATCAAGAAGCGTCGTGGCATGCGCTTGTACTGCGAGATGTGTGGCTTGGAATTTCCCTCCTGGAAGCGTTTCAATTTTCACAATCAATTCCATCTGGAGCGACACAGGCCACGCGCCTGTTTTGTGTGCAACTATGCGAACAACAACATTGACGATCTGTTCCAGCATCTGCACTACTCCCACGAACCCGAGGGCACGCTCTTCTGCGATCTCTGTGATCGCAACTTCCGTGATGCAGCCGTTTTTATGGAGCACAACAAGTCACACGCCAACGTCAGCAGCACCACTTATTCCTGCAGCGAGTGCAACGCCAACTTCGAGACACGCGGACGCCTTAACGGTCATATGCGTTCCATACATGGCAGCATCATTAGCTGCGAGTTGTGCAGCCGCGAGTTTGCCACGGAGGCCACCTTCAACATCCACATGAAGAAGCATTTGATTATCGAGCGCGAGGTGCACGTTTGCAACAACTGCGGTATGCTCAGTGAGAATCACGAGAAGATGTTGGCACATGTGGACACCGAGGAGTCGCCGTGCTTTGGCGTCGATATCTACGTTGAACTGCTGCGCGATGCCTACATCTGCGAATACTGTTCGGCATACTTCAAGCAGAAGACCGATCTACGCGCGCATCGCGATTCAGGCGTGCACAAAAATGGCATGTTCTGGTGTCAACCATGTGAGAAGGAGTTTGCGGACATGAAACTCTATCGGCATCATCTGCGCAACTATCAGTTGCAGCGTGCCGATGTGGACCATCGTAAACTAGAGATTTGTCTGTACTATATGTGCGACTTTGAGGATTGTCTTGAATCGTACATCAATTGGAACTCGTTGTATACGCACAAGCGGCGCACACACGATACATCCGAGAAAATGGAAGCCAAAACGAAAGAGGGTGAATGGATTTGTCAGTTCTGCCAGAAAGTGTGTCGCTCTAAGATGTCATTATCCGTTCATGTGGCAAGAAGTCACAACAATAACAATGTTGTCTGTTCGCTGTGCAAGGCTTCGTATAAGGATGAGGAGGCGCTGAAGAAGCATCATGCGTACTGGCACGAGCCTATGGAGTGTGCGCTGTGCCTGAAGATCGTCAAGAATCGCCGTAACTTCGACACGCACATGAATGTGGTGCACTCGAACAACAAGCGCTACAAGTGCTCCGTCTGCCAAAAGGGATTCTATCACAAGAGCGAAATGGAGGCCCATCAGCGGCTGCATAACCAACTCTATAGTTGCGAGCAGTGCAGCTTCCAGACACGCAACAAGAAGTCGTTGTCGGTGCATGTGCTCGGCCAGCATTACAAACGCTTCGCCTTCGAGTGTAAGGTGTGTGACAAACGATTTGGACGTCAACAGGGACTGTCTAACCACATACAACGTGTCCATGGTTCGAAGTACACGTGCCGCGACTTCTTCGATGGCGGCTGCAGCAGATCTTTTGGATCAACCACACAGCTCAATGTGCATGTGCGTAAGGTGCATAACGGCAGCATCTTGTTCGAGGAAGACATCGACAACGAAAAGGCTGAAGAGGAGCAGGTGGAACAACAGGAAGAGGAGGAGGAAATGGATGGAGAGCAGCAGCAAGTGCAAAAAGAGGAAAAAAATGCAGCAGGTCCGTCCTCATCGAAAAAACGTTGTATTCGCATCAACGATGATACGCAAATTGAGTTTATTGGCGGCGAAGAAATCGAAGACGAAGTAGAAATGCTGGAGGAGATTGAAGAGTTGAAGCACGAGCGTAAAGCGCCCCCAAAGAAGAAGCAGAAACGAACTTAA
Protein Sequence: MSENSKINSETGPSCLHCRVHNSKQPYQEIFDEVGVEIELADLLAKYFQINVKPDPQKPQLLCQECVKTLIRFFDIDELQREQDAASKKAPQIVADPVSVATPVAKKETKSTGKKQTPPPPKATVESKTLPVASKKLSPPVDLQPAKSGPSVAPTQAISIRITRAKSQATLPKRLQIAPKGKASETAAGKGRKAKEGDQEQISALIRDILDDEETPPDEKFAEAAATVRQLETQAVEEQEQEQEQEQETVAEELHEEQQQEPENGDELEFLVEQDDETSESEQRQFKVVKKAYPDDSQSANETQSEDESLKVEPFNFVLIKESDGIDDLFEYLGTVVKTCFETLTFDWATVCRHCSLKCSKYENLLNHMLKRHQLPQERFKCPIDGCTAELKGRKYLAMHLVVLHAPVADIPIYGSCPECNMTFSNILQYNKHSCAHVIKKRRGMRLYCEMCGLEFPSWKRFNFHNQFHLERHRPRACFVCNYANNNIDDLFQHLHYSHEPEGTLFCDLCDRNFRDAAVFMEHNKSHANVSSTTYSCSECNANFETRGRLNGHMRSIHGSIISCELCSREFATEATFNIHMKKHLIIEREVHVCNNCGMLSENHEKMLAHVDTEESPCFGVDIYVELLRDAYICEYCSAYFKQKTDLRAHRDSGVHKNGMFWCQPCEKEFADMKLYRHHLRNYQLQRADVDHRKLEICLYYMCDFEDCLESYINWNSLYTHKRRTHDTSEKMEAKTKEGEWICQFCQKVCRSKMSLSVHVARSHNNNNVVCSLCKASYKDEEALKKHHAYWHEPMECALCLKIVKNRRNFDTHMNVVHSNNKRYKCSVCQKGFYHKSEMEAHQRLHNQLYSCEQCSFQTRNKKSLSVHVLGQHYKRFAFECKVCDKRFGRQQGLSNHIQRVHGSKYTCRDFFDGGCSRSFGSTTQLNVHVRKVHNGSILFEEDIDNEKAEEEQVEQQEEEEEMDGEQQQVQKEEKNAAGPSSSKKRCIRINDDTQIEFIGGEEIEDEVEMLEEIEELKHERKAPPKKKQKRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01559910;
90% Identity: iTF_01550457;
80% Identity: -