Zorn010855.1
Basic Information
- Insect
- Zaprionus ornatus
- Gene Symbol
- hang
- Assembly
- GCA_018904035.1
- Location
- JAEIFZ010000001.1:20461048-20475040[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.17 13 6.4 1.0 3 23 358 379 357 379 0.93 2 14 0.13 9.7 6.8 3.5 3 22 486 505 484 505 0.89 3 14 0.00037 0.029 14.8 3.3 1 22 598 619 598 621 0.90 4 14 0.043 3.3 8.3 0.1 2 21 633 652 632 653 0.93 5 14 0.00043 0.033 14.6 0.2 2 23 785 807 784 807 0.95 6 14 0.0012 0.095 13.2 0.1 1 23 815 838 815 838 0.96 7 14 1e-05 0.00077 19.7 0.1 2 23 924 945 923 945 0.97 8 14 0.00018 0.014 15.8 2.9 2 23 997 1019 996 1019 0.97 9 14 0.014 1.1 9.9 0.2 2 23 1028 1050 1027 1050 0.95 10 14 0.0049 0.38 11.3 0.6 1 23 1063 1086 1063 1086 0.97 11 14 7.7e-05 0.006 17.0 1.1 1 23 1138 1160 1138 1160 0.99 12 14 0.0012 0.092 13.2 0.9 1 23 1168 1191 1168 1191 0.96 13 14 4.3e-05 0.0033 17.7 0.4 3 23 1254 1274 1253 1274 0.98 14 14 0.0031 0.24 11.9 0.1 1 23 1309 1331 1309 1331 0.97
Sequence Information
- Coding Sequence
- ATGTGCGACGCTGCCGCAACAACAACAACAGCGACATTACAAACCGAACCAGGAGCTTCGGCTGCAGCGGGGGCTGCCACCGCAGCTGGAGCCGGAGCCAGCGACACAGGAGGAACTACAACCACAACAGCAAAAGCGATGGAAGAACAGAATCAACGTACACGACAAGGCTGTTGTCGCCTTTGCATTGCCCCCGCCAGCGAGTGCATTTCGATCATTAACAGTTATGCGGCCGATAAGGAGCCACTGGCTACTAAAATACATAACTGCGTAAATATCAAGATCACAGCATTGGATCGCCTATCGCTGTACATATGCCATGCCTGCATCAGCTATTTGAACTCTTGGCAGAGTTTCAAGAACCGCTGCCTCAGCTCCCAGACTAAACAGCGTCAATGGCTCGACTCCGATCGGAAGCAGCAGACGCTTTTGGCGCCGTTGCCTTTGCCGTTGCCATTGCCATTAGCGTTGCCGTTGCCAGTGCCGTTGCCTTTGCCATTGTCGTTGTCGCTGCCGCCTGATTTCAGCCAGAATCCGAATCCGATTCAGACTGTGAATCTCAATTCGAATTCGAATCTGAATCAGAATCAAAGTTTACGATGTAGCAACGTTATGCCGACGCCCCCACCCCCGTCGTCGCAGCTATCACAAACTGCTGTTGCAACAATGACTAGCAACGTCGCGGCCACCGCCTGTGCCACAGCCACTGCCGCTGCCGCTGGCACTGCCTCATCCTCTGCTTCTGGGTCTGCGTCTGCTTGCGTCGCCTCTGTCTCTGCTGCAGTCACGACTCCGTTGCTCATGCCGCCGCTGCCCGCTGTGCCCATCAAGGATGAGCCTCTGGACGACACAGACGATGACTTTCAAATGAAGTGCATTGACGAGTCCGATGACATGATGGATCCCACAATGTTCCTAGAGCGCTCCGAGCATGAGGGCGATGTGCCAATAATGACCTCCGAATATGATTATGCGACGCAGCATGGCGTAACGGCAGTTGCGGCAGCAGCAACGCTACCCGCCACCGCTGTCGCAAATGTGGCAGCCGCTGGTGATTCCAAGGTGGCCAGCTGCCGTGCCTGCAGTCTGCAGTTCTCGACGCGGGCGAATGCGCGACGCCATGAACGCAATCTTCATCCGAATCTATTTCAACTGTCGACAGATTCGCCAAATAATACGCCGATAACAAAGCCAACGCCAGCACTGGCTGCCGCACTGGAGATACAGCGTGCTGCCGCAGCGGCGGCGGCCACAGCGGAGGCAACCAAAGCCGCAGCCGGTGGAAATATATCCACTCAAAAGTATCGCCAGGTGGTCATGAATACGTTCATCAAGTGTGAGAACGGAGGCTATGACTACGACAATCCGGAGCAATATCAGCAGTTGTTGACGCGCGACAAGGTCGAGTTCATACAGGAGAATAGCGAGTTCCTGGAACAATACCAGACTATGACCTGCCGCTGCTGCAACAAGTTCTTCAGCACGTACAAGAACTTCATGGCGCATGTGAGGAAGAAGTATCCGCTGTTGCCGCGCAACTTATGCTTTAATTGCCTCAAGATGAACGACTCCAAGGCGTTGTTCATCTCGCATCTGAAGAAGCGTAACTGCATCAACTTGTACCGTGTACTGAATGCTCTGCGTGCCAAACAGCCAAGTTTTGCTCATGCCACGGCAGGAGGAGGAGGAGGCTCAGCAGATCAGCAGCACCTGCAGCTAACGTCGGCACATGATACGTCTGCGGATCGGCCAGAGAAGCTGCGTGCCAAGGAGCTGCTGGTGAACAAGCTGTACGAGTGCAAGCTCTGCCCTAAGGGATTTCGCACCAAGCACGAGTTCCGCACCCATGTCTACGATAAGCATGCGGATGTGCAGCGCAAGGACAACAATTCGATACAGTGTAGTTTCTGTGGCTTGGACTTTGCCGATCCAGTCGATCGGCGACGGCATTATAACAATATGGACTGCATTGTCCGGCTGCGCTGCATGACCTGCGATGCCAAGCTGGAGACGCATCAGCGTTTCCTCGATCACGTCTATCAGGATCACTTGGGTGGCGTGAGCAGCGACAATGCATCGACGGGCAACAGTGGCTTGGATCATTCGCCTGGCAAGCGCAGTCTGCTGGGTGCTCTGGGCATTGGGATCAGTCAATCTTCAAACGAGGAGTCACGCAGCAGCAGCAACAATAATAATAATGCTGGGGCTGGTGGAGCACCTTTAACCTCAACGCCCAAGCCAAGTGGCGGAGCAGGAGCAGCGGCTGCAACGGCAGCAGCCACCTCGGCTGGCTCCACGAGTGGCGGCAGTAGGGATGCGCCCAAGTCACAGTACTTCTCGCGCATGCCCCAGGTGTGTCCGATCTGTGGACAGCAGTACAACAACTACAACAATGTGCTGCGTCACATGGAATCAAAGCATCCCAACAAGTTGCCCGAGACATACAAGTGCGTGCGCTGCGGACTGGGCTACCCGCGCATCTCGTACCTGCGCGAGCACATGATCAATGTGCATGGCGTGGACAAGAATCGGCATTCAGGCGGCTTCGAGTACATTGTGAATGCGGATGCAGTCAAGCTGGCGGATGGCAGTACACCCAATGTCTATACGGGACGCTATGACTATGTCATGAAGGATTTGATGTCCATAACAAATGGTGGGACACTCGATGATGACGAAGAGGAAACCGGCAGCATTGCCAAGAAGATGCGTCTCGACGACAGCAGCAACAACAGCAGCATCAACACGAGCATTGCCAACCAGCAGAAGGAGTGCCCCATCTGCAACGCGGTGTTCAGCAACAACATTGGACTCTCTAATCACATGCGCTCCCACTACACTGCCTCGACAGCGACCAATGCAGCCTTGGCGGCGGCAAACCGCATGACACCCAACTTGCCGCCAGCGATGGCCCATCAAACGCCACAGGAGCAAGCCGTCTTTCGACGTAGCTTGGATCAGGCTGCCGATCGTCGCTTCCGACGCATGCGGTGCCGCATCTGTCAGCGTCGATTCAGCTCGAAGAAGTCTTATCGCTATCACATGCTCACCGATCATCAGGTGCAGAACGTGCAGTTCATCAAGTGCAAGCTCTGCAATGCCGAGTTCGCCTACGAGAAGGGTCTGAAGGTGCATCTGTTCAAGGTGCATGGGCGTGCCATTAAGGACGAGATGATTGTCAAACAGTTCGAGTGTGATGTCTGCTCCATTGTCTACAGCTCTGAGCTGGAGCTGCATCAGCACAAGCGCAGTGTCCACAAATCCCAATTGGGCAGCAATTCAATGAAATCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCCACTACTGCCTCTGCTGATCTCGCTGAGACATCAATGACAGGAGTGGGGGCGGGGGCCAATTTGCCGCTGTACTGGTATCAGTGCAAGTATTGTCCATCTAACTTCAACACCAACAAAAAGCTGGCGATCCACATCAATTCGCACGATGAGTTCGACTCGAGTGACTATTCGTGCAAGGATTGCGGCAATGTGTACAGCGGTCGCAAGAGTCTATGGGTGCATCGCTATAAGAAGCATCCGCAGGTGCCTGATCCCGCCGAGTGCACGCTGTGCCGAGAAGGCGGAGGCGGTGCTGGTGCTGGCGAAGGAGTCGATAGCAATGGTGGTGGCAACACTGTTGTTGCTGTTGGCAAGGCTGGCAAGAATGCGGGCACAAACAGCCACGGCACAGGCACACTGAAGATTCGCATACCCGAAGTGGCATGCACCATTTGTGGGGCACGTTTCACAGATCAGGAGATGTTTAGCAAGCACATACAGCGACACGAACAGGACCTTTATGTCGATAATCCTTTGGCAGCGATGTTCGACGATGGTCCTGCCGATGCTGGACAGTTTCAGGTGGAGCGACAGAACGAGAACGGGGAATACGCGTGCGATTTGTGCGCCAAGACGTTCCCGCAGGTGATCGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGGTGAGCTTTTTGGGCTTGTGCAGCGAGGTGAATCTAATCAGTATCCAGCATCATCAATGGTGA
- Protein Sequence
- MCDAAATTTTATLQTEPGASAAAGAATAAGAGASDTGGTTTTTAKAMEEQNQRTRQGCCRLCIAPASECISIINSYAADKEPLATKIHNCVNIKITALDRLSLYICHACISYLNSWQSFKNRCLSSQTKQRQWLDSDRKQQTLLAPLPLPLPLPLALPLPVPLPLPLSLSLPPDFSQNPNPIQTVNLNSNSNLNQNQSLRCSNVMPTPPPPSSQLSQTAVATMTSNVAATACATATAAAAGTASSSASGSASACVASVSAAVTTPLLMPPLPAVPIKDEPLDDTDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPIMTSEYDYATQHGVTAVAAAATLPATAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISTQKYRQVVMNTFIKCENGGYDYDNPEQYQQLLTRDKVEFIQENSEFLEQYQTMTCRCCNKFFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRAKQPSFAHATAGGGGGSADQQHLQLTSAHDTSADRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNASTGNSGLDHSPGKRSLLGALGIGISQSSNEESRSSSNNNNNAGAGGAPLTSTPKPSGGAGAAAATAAATSAGSTSGGSRDAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDEEETGSIAKKMRLDDSSNNSSINTSIANQQKECPICNAVFSNNIGLSNHMRSHYTASTATNAALAAANRMTPNLPPAMAHQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDVCSIVYSSELELHQHKRSVHKSQLGSNSMKSXXXXXXXXXXXXXXSTTASADLAETSMTGVGAGANLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSSDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECTLCREGGGGAGAGEGVDSNGGGNTVVAVGKAGKNAGTNSHGTGTLKIRIPEVACTICGARFTDQEMFSKHIQRHEQDLYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQVSFLGLCSEVNLISIQHHQW
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -