Zorn016544.1
Basic Information
- Insect
- Zaprionus ornatus
- Gene Symbol
- -
- Assembly
- GCA_018904035.1
- Location
- JAEIFZ010000238.1:8877597-8888371[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.6e-12 6.4e-09 35.4 0.0 1 41 76 117 76 120 0.90 2 4 2e-14 4.9e-11 42.1 0.1 2 39 131 168 130 171 0.94 3 4 3.5e-18 8.6e-15 54.1 0.0 1 45 185 230 185 230 0.98 4 4 2.2e-20 5.5e-17 61.2 0.0 1 43 237 280 237 282 0.96
Sequence Information
- Coding Sequence
- ATGGAGATTGATCCGAGCCAGATCAAACACGAGCCTGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACTGGGCATATGGATATGTACAACTCGGATACGAGCGAGGATTCGATGATGATTGCCAACGGTTCGCCGCACGATCAAAATGAACCGCACTATACGAATTTGGATCAGCAACACGGCGGCTTGGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCCTCGACAACATTATGGCAACGTGCACATCGTCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGTACCAAATCATGGAATGAGGATGCCTTACAGAGTGCACTGGAGGCATTGAGATCGGGTCAGATATCAGCTAATAAAGCATCCAAAGCGTTTGGTATACCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATTCGTGCTGGCAATACGTCGGTGCAAAAAGCGAGTGCCGAGTTTGGCATACCAACAGGAACACTCTATGGACGCTGCAAACGGGAGGGTATCGAACTTTCGCGTTCGAATCCAACACCTTGGTCCGAAGATGCCATGAACGAGGCATTGAACTCAGTGCGCGTTGGCCAGATGTCCATTAATCAGGCGGCCATACACTACAACCTGCCCTACAGTTCCCTCTACGGGCGCTTCAAGCGCGGCAAATACGACGTGGCCAACACCAGCGGAGTCTCGTTGCTTAACGCTTCGGGCAACACCACCGGCAGCATTGAGATTATTGAACATAGTCAGGAGAATTCGCCATTCTCTTCTTGCCCCACTGTGCAGCCTGTTAAACAGACTCCCGTTGATACTTCAACAGTTGCTCGCTCTGCTATGCGACCATTTCAGTTTGGACCGGCAACAGCTTCAGGTGGTTCGATTGCGACCTTGTCTGCTGCGTTGCGTATACGTAATGTGCATGTAAATTCATTCGCTCGCTTTACGTTCATTATCACTGCCAATGCGGCACTTGCACGCACCATACGCACACGTATTCGTGCACACGCACATCTGTATCTGTATCTGGATCTGATGCTCTCTTGTTTTAGCTGCTTTGCCTCGAGATTTGATGAGGCATTTTGGTTTGATGAGCGGCGCATATGA
- Protein Sequence
- MEIDPSQIKHEPGMIITPEIVNMMSTGHMDMYNSDTSEDSMMIANGSPHDQNEPHYTNLDQQHGGLGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQSALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANTSGVSLLNASGNTTGSIEIIEHSQENSPFSSCPTVQPVKQTPVDTSTVARSAMRPFQFGPATASGGSIATLSAALRIRNVHVNSFARFTFIITANAALARTIRTRIRAHAHLYLYLDLMLSCFSCFASRFDEAFWFDERRI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -