Zorn013666.1
Basic Information
- Insect
- Zaprionus ornatus
- Gene Symbol
- retn
- Assembly
- GCA_018904035.1
- Location
- JAEIFZ010000253.1:4927558-4938537[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-26 3.5e-23 81.8 0.0 2 89 28 113 27 113 0.96 2 2 4.1 1e+04 -3.1 0.0 28 44 221 237 211 247 0.70
Sequence Information
- Coding Sequence
- ATGCTCATCTCCGAGGATCAAATACAGGAGTTTGCATTTGCTTTTCTCTTGCAGCTCTACGAAATCAACGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGCGCGGCACGCCCATCAATCGGCTGCCGATAATGGCCAAATCGGTGCTGGATCTATATGAGCTATATAATCTGGTTATAGCGCGCGGCGGCCTTGTCGATGTGATCAACAAGAAGCTATGGCAGGAGATCATCAAGGGACTGCATCTGCCGTCGAGCATCACCAGTGCCGCATTCACGCTACGCACCCAATACATGAAGTACTTGTATCCATACGAATGCGAGAAGAAGAACCTCAGCACACCAGCGGAACTGCAGGCGGCCATTGATGGCAATCGTCGCGAAGGACGTCGCTCTAGCTATGGACAGTACGAGGCTATGCACAATCAAATGCCATTGACACCCATTTCACGCCAATCGCTACCCGGTGGCATGCAACAAATGTCCCCACTGGCGCTGGTCACACACGCCGCTGCAGCCAACAATCAACAGGCACAGGCAGCAGCAGCGGCGGCAGCAGCGCATCGTCGCCTGATGGGCGGCCCCGCCTTCGGGCAGATGCCGAATCTGGTGACACAAGAGATCGAGAATCGCATGATGGACGCGCAGGTGGCCCTGTGGCAAATGTACCACAACAGCAGCCCAACCGGTTCGGCACACACCTCACCACAGCAACGCGAAGCTTTGAACCTATCCGATTCACCGCCCAATCTCAACTTGAGTCACATCAAACGAGAACGTGATCGTGATCCCACGCCAGAGCCAGCGGATCACGAGGAGGCACCACCGCCAGCAAAGCGTGTGGGCAGTGATGATTCTGCCATTGAGAACTCACCCAGCACATCCAACACAACCGCCGCATCCGCTTCGGGTGGTGGCAATCGACACAGTTCGCCTGTGTCCACCAAGAAGAAGTGCAACAGCAGCAGCAAAACACAGTCTAGCTCCAAGCAGGAGCAGCAGCAGGCACAGCAGGAAGGAGGTGGCGCAGCCGTCAAGCTGAATCCCCTAGAGACGCTCAGTCTGCTCTCTGGCATGCAATTCCAAGTGGCACGCAATGGCACCGGTGCAAATGGTGAACAACAGTTGATTGTCAACCTGGAGCTGAATGGCATCAAGTACACTGGGGTGCTGGTGGCCAATGCAGCAGGAGCAGCACGTGAAGTCGATGAGGAGGAGGAGGAGGAACAGCATGAGGAGGCAACAGCAGCTGACAAGTGCGAGGAGGAGCAGTCTTCACCACGCTCAGATGTGGTGAAGTTGGAGAAGCGTCAGGAAAATAAGCAACAGGAGGCACACGATGAACAGGTGGAGACGCCACCATCGCCTCCACTGACCGATAACAATGGTGCGGGGGAGAATGAAGCAACAACGAGTGTGGGTGCACTGGGCTTAGGGGGCGTGGTAGGCGGAGTAGGCGTAAATATGCTAAAAGATGCTGTGGTCAGTTCGTAA
- Protein Sequence
- MLISEDQIQEFAFAFLLQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRQSLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMDAQVALWQMYHNSSPTGSAHTSPQQREALNLSDSPPNLNLSHIKRERDRDPTPEPADHEEAPPPAKRVGSDDSAIENSPSTSNTTAASASGGGNRHSSPVSTKKKCNSSSKTQSSSKQEQQQAQQEGGGAAVKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYTGVLVANAAGAAREVDEEEEEEQHEEATAADKCEEEQSSPRSDVVKLEKRQENKQQEAHDEQVETPPSPPLTDNNGAGENEATTSVGALGLGGVVGGVGVNMLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01555218;
- 90% Identity
- -
- 80% Identity
- -