Zorn010992.1
Basic Information
- Insect
- Zaprionus ornatus
- Gene Symbol
- lz
- Assembly
- GCA_018904035.1
- Location
- JAEIFZ010000001.1:21788158-21813607[-]
Transcription Factor Domain
- TF Family
- Runt
- Domain
- Runt domain
- PFAM
- PF00853
- TF Group
- Beta-Scaffold Factors
- Description
- The AML1 gene is rearranged by the t(8;21) translocation in acute myeloid leukemia [1]. The gene is highly similar to the Drosophila melanogaster segmentation gene runt and to the mouse transcription factor PEBP2 alpha subunit gene [1]. The region of shared similarity, known as the Runt domain, is responsible for DNA-binding and protein-protein interaction.In addition to the highly-conserved Runt domain, the AML-1 gene product carries a putative ATP-binding site (GRSGRGKS), and has a C-terminal region rich in proline and serine residues. The protein (known as acute myeloid leukemia 1 protein, oncogene AML-1, core-binding factor (CBF), alpha-B subunit, etc.) binds to the core site, 5'-pygpyggt-3', of a number of enhancers and promoters.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-68 8e-65 216.2 0.0 9 129 4 124 1 124 0.98
Sequence Information
- Coding Sequence
- ATGCGGATACATAGATATGTACTGCGTACGAGCAATCCCTACTTCCTGTGCTCAGCCCTGCCCTCCCACTGGCGCTCCAATAAGACCCTGCCACTGGCATTCAAAGTGGTCGCCCTGGCAGATGTCGGCGACGGCACCTACGTGACCATCCGTGCCGGCAACGATGAGAACTGCTGCGCCGAGCTGCGCAACTACACGGCCCAGATGAAGAACGGCGTCGCCAAGTTCAACGATCTGCGATTTGTCGGACGCAGCGGAAGAGGCAAGAGCTTTACACTGACAATTACCGTTGCGACGAGCCCGCCACAGGTGGCCACCTATGCCAAAGCCATCAAAGTGACTGTCGATGGGCCCCGCGAGCCGCGCTCTAAGACGAGTCCTCCCGGCGGACTGCAGTACCGTGCTCCCGGTCTGGGCCACCGACCGTTTATGGATGGTTTCCCCAAAGCTTATCACGATCTGGAAACACTACGTCGCTCCACAAAGGCAGCCAACACGGCCGTAGCAGCCGCAGCGTCGGCTGCCGCATCGGCTGCAACGGCGAGCAACGCGTTAACCACAAGCGCGAGCATTGCCCAGCAATTGGGCAGCAATTTCTCATCGTCCAACAGTACAATAAATTCGGATTGCCAGGGCTACAAGCCGAATGCGCCGCAAATTCAAGAAACGGACTTGATCGGCGCCGCCGAGTGGACCGGCTCCGGTGGCAATGTGGCCTACCCAGTGGGCGTTGGTGTGGGCGTCGGCGTGGGTGTGGGAGTACCTTATCCTCATGCACACCACTCGCACTCGCATTCGCACACCCACTCGCACTCACATTCGCACTCGCATTCGCACGCGCACAGCCACAGCAGCACGCACCACCATCACGCGCACCACCTGCAGCATCAGGTGGCACTGCCGCCTCCGCCGCCCCCGCCCGCTGCGGCCCCAGTGCCTGTGCCCATGGGCAATGCCACGGCAATGAATCCCTATGGCAGTGCCATGGGTGGCTACGACACCACCACGCTGGATGCAAGCAATTACCATCTATCCACCGTGCTGCCGGACATGCACGGCTTCTCTGCGGATCCGTATCAGACTGCCGCTGCGGCTGGTGGCTACGGCGGCACAGGTGGCGGCAAGTCCGAGCTGGAGTCGCTCAATGCCAGCTACGGCGCCACCACAGCGAGCGCCTACAACAATCCGGCCTGGTCGAATGGCTACAACAACTATCAGTACGGTAGCTGCTCGGCCACGGCGGCTCAGTATGGAGGAGGAGGTGGCCATACGAGTGCCCCGCCACCACCGCCACCTGTGGTGCTGTATCCGCAGCTCTACTCGACCGTCAACCAGAACCAGATCCACCTGCATCTGCACAGCAGCGAGAAACTGGAGCAGTACCTGGCAACGGATCAGCAGCTGACCATCAGTTCGCTGGGGGCCAATCGGTCCAGCATTGAGATCGGTCTGGGCGCTGGCGCTGGCGTCGGCGGTGTCGGTGGAGTCGTGTGGCGCCCTTATTGA
- Protein Sequence
- MRIHRYVLRTSNPYFLCSALPSHWRSNKTLPLAFKVVALADVGDGTYVTIRAGNDENCCAELRNYTAQMKNGVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPRSKTSPPGGLQYRAPGLGHRPFMDGFPKAYHDLETLRRSTKAANTAVAAAASAAASAATASNALTTSASIAQQLGSNFSSSNSTINSDCQGYKPNAPQIQETDLIGAAEWTGSGGNVAYPVGVGVGVGVGVGVPYPHAHHSHSHSHTHSHSHSHSHSHAHSHSSTHHHHAHHLQHQVALPPPPPPPAAAPVPVPMGNATAMNPYGSAMGGYDTTTLDASNYHLSTVLPDMHGFSADPYQTAAAAGGYGGTGGGKSELESLNASYGATTASAYNNPAWSNGYNNYQYGSCSATAAQYGGGGGHTSAPPPPPPVVLYPQLYSTVNQNQIHLHLHSSEKLEQYLATDQQLTISSLGANRSSIEIGLGAGAGVGGVGGVVWRPY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01556603; iTF_01558053; iTF_01559533; iTF_01553742; iTF_01548633; iTF_00584207; iTF_01550769; iTF_01551497; iTF_01550052; iTF_01552947; iTF_01558807;
- 90% Identity
- iTF_01558053; iTF_01550769; iTF_01559533; iTF_01553742; iTF_01548633; iTF_01552947; iTF_01556603;
- 80% Identity
- -