Znig010215.1
Basic Information
- Insect
- Zaprionus nigranus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018903425.1
- Location
- JAEIGD010000046.1:696886-699846[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.068 2.1e+02 2.0 0.0 16 35 17 36 13 41 0.85 2 2 2.1e-19 6.4e-16 58.0 0.0 1 43 218 261 218 263 0.95
Sequence Information
- Coding Sequence
- ATGCCAGCGTCAGCCACGCGCTGCATCAGCGAGCCACTGTCCAAGCACAAGCTTGGCGGGCGACGTGCATCCGGTTATTACCAAGGACCGCGCTCGACGATGCTGCGCAACAAACTGTGCAAGTTGTCGTCGCCCGAACTGAAGCGAGAGCCACAGCACGAGTTGCAGCACGAGCACGACGGCGCCAGCTCCGGGCTGGGAGCAGAGGAGCAAGATGAGTCTGGTGACGAGGTCGGAGATGGCGATAGCAATGCATCGACGCCGCCATCGACAGGCTTTCAGGAGTTCGCCCAACACATTGCGGCCAGCGAACATCTGCGCAAGCTAAGCGGCATGTCCGAGCAAAATGGTAGCGAGCTGGGTGACGATCTGGAGTCGGGTCAAATGTCGCCCAAGCTGATGCGGCCACAGAGCACAGGCACACCCACGGCGGGCGCTGCTGGGCTGCAGGGAGCGACAGCGGCAGCGATGGCAGCCAGCGCCGCAGGGTTGCTGCAAACGTTGCTGCTGGCGACGGGCATCGTTATGCCCAATCCGGATGATACACAGCGACTGGGAGATCTGATCAAGACACTGATACTGGCAAATAGTGGAGGCATTCTGAATGAGAGACTTGGAACGCGACCAAAGCGCGGCAAGTACCGCAACTACGATAGGGACAGTCTGGTCGAGGCAGTCAAGGCGGTGCAGCGTGGCGAGATGTCGGTGCATCGTGCGGGCAGCTACTACGGCGTGCCGCACTCTACACTGGAGTACAAAGTGAAGGAGCGTCATCTGATGAGGCCGCGCAAGCGTGAGCCAAAACCTCAACCGGATCTCCCCAGCATGTTCTGGGCGCAGCCCAATGCGGGCGCCAACTATGCCCTGGACTTCAATCGGAATCCCGAATTTCTAAAGTCGCACCTTGCCGAGGTGATGCGCAGCAGTCCGCTGGCCAATCATCATGCCGTTCATGCAGGCTCTGCCGCAGCGGGGGGGCATGAAGAACTCTCAATAATGATGGCGACATGGGGGGGAGCCACCAGCGGCACGGGCAACGGCAATGCGCTGCTGGATCAGCTGCTGGTGAAGAAGACGCCTCTGCCGTTTACCAATAATCGCAGCAACGATTATCTGGCTGCCACCTGCTCCTCCAGAGAGGGCGCTGAGGGTGTCAAGCGGCCGGGCAGTCCTCTGGGTGGCGGCGGCAGCGAACTGTCGCACAGCTCGGCTCGCCTGGCCAGCAAAATGATGGATCTCAATGGCAGTTCGAGCATCAAATTCGAGCCAGAGCTGCAGCACGAACCTGCAGCAGGGACGCCGACAACGACGTCGACAGCAATATCGCCCGGCAGTTCCATACTGCACGAGAAGCTGGCACAGATCAAGGCCGAGCAGTGCGACTATGCTGCCAGCGATGAGCAGTTATAG
- Protein Sequence
- MPASATRCISEPLSKHKLGGRRASGYYQGPRSTMLRNKLCKLSSPELKREPQHELQHEHDGASSGLGAEEQDESGDEVGDGDSNASTPPSTGFQEFAQHIAASEHLRKLSGMSEQNGSELGDDLESGQMSPKLMRPQSTGTPTAGAAGLQGATAAAMAASAAGLLQTLLLATGIVMPNPDDTQRLGDLIKTLILANSGGILNERLGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLPSMFWAQPNAGANYALDFNRNPEFLKSHLAEVMRSSPLANHHAVHAGSAAAGGHEELSIMMATWGGATSGTGNGNALLDQLLVKKTPLPFTNNRSNDYLAATCSSREGAEGVKRPGSPLGGGGSELSHSSARLASKMMDLNGSSSIKFEPELQHEPAAGTPTTTSTAISPGSSILHEKLAQIKAEQCDYAASDEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -