Basic Information

Gene Symbol
osa
Assembly
GCA_018903425.1
Location
JAEIGD010000001.1:3214375-3221150[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.78 2.8e+03 -1.0 0.0 12 47 230 268 225 272 0.81
2 2 2.5e-25 8.9e-22 77.5 0.0 3 89 478 564 476 564 0.92

Sequence Information

Coding Sequence
ATGAGACCTACACCCTCGCCTACTGGCTCATCAGGCTCACGATCAATGTCTCCAGCAGTGGCACAAAATCATCCAATCTCGCGCCCGGCGAGTAATCAGTCAAGTAGTGGGGGCCCAATGCAGCAACCACCATCGGTCAGTGGACCACCCCCAATGCCCCAGCATAGTCTACCAGGCGCACCACAATCACAGCAATCTCAGCAGCAGCAGGCTTCGAATTCAGCATCGTCCGCCAGTAATTCACCTCAGCAGACTACACCTCCCGCCCCGCCACCAAACCAAAATGTTAACAATATGGCAACACCACCACCCCCACCGCAAGGATCCACAGGTGGTTATCCTATTCCGCAGCATATGCATGGCAGTTACAAAATGAGTGGACCCGGACAAAGTCCCGGCGCTCAAGGATATCCCCCACAACAATATCCACAAGGTAATTATCCTCCACGACCGCAATATCCGTCGGGTGCTTATGCAGCTGGACCACCACCTCCGCCAACTAGCCAAGCCGCTGGCGGAGTTAACAATATGTCATCTGGCGCACAAAGTGGTTATCCTCGATCGATGCCTAACCACAGTGGTAGTAGCCCTCATCCACAGTATCCACCATATCAGTGGGTGCCGCCAAGTCCGCAACAAACTGGGCCTGGTGTCGGATCTGGACAAATGGGCAGTTCTATGGGCAACCATGTGCAAGGAAAAGGCACACCTCCACCGGTTGGACCACCACCTCCCCAGGGAAGTGGTTCTCCGCGCCCTCTAAACTATCTGAAGCAGCATTTACAGCACAAAGGTGGTTACGTCGCCAACCCAGCAGCTCCTCAGCCACAAGGATATGGCAATGGACCGACTGCAATGCATCCAACAATGCCAATGGGTCCACCGCATCATATGGGCCCACCGCAAAGTATGGGACCGCCAACTAGCACACCGCCGCAGTCCATGCTGGGTGCGCAGCCTGTAAGTGACAGTGGTCCAGAGCATATATCGCAGGACAATGGTATAAGTTCGTCCGGGGCATCTTCAGCCTCGAACTTGCATGCCGTGACTGCAGTAGTTACAACTGGTCCAGATGGTACCCCAATGGATGAAGTTAGTCAACAGAGCACACTGTCGAATGCATCGGCTGCATCAGGCGAAGATCCACAATGTACTACACCAAAGTCGCGCAAACATGATCCATACAGCCAAAGTCATTTAGCACCACCGAGCACATCTCCACATCCTGTTGTAATGCATGGCAGCAGTGGTCCATCTGGCGAGGAATACGAAATGAATTCTCCACCAAATTGGCCACGTCCAGTTGCTAGTGCGCAGGTGTTCAATAGTCATGTTCCTGTTCAACAAGAACCATTTCGCAGCACTATTACTACAACCAAGAAGTCGGACTCGCTCTGTAAACTATACGAGATGGATGACAATCCAGATAGACGCGGTTGGCTAGATAAATTGCGGGCTTTTATGGAAGAACGTCGGACGCCGATAACGGCTTGTCCAACCATCTCAAAACAGCCACTCGATTTATATAGGTTATACATTTATGTAAAAGAACGTGGCGGATTCGTCGAGGTATGCAAGGTAACAAAGAGCAAGACCTGGAAGGATATAGCTGGTCTGTTAGGAATTGGCGCTAGTAGCAGTGCTGCATACACTCTTCGCAAACATTACACAAAGAATCTTTTGGCATTCGAGTGTCACTTTGATCGAGGCGACATCGATCCATTACCTATCATACAACAGGTTGAGGCTGGTAGCAAGAAAAAGACAACGAAAGCACCATCTGTGCCCTCACCAGGGTCGTCAAACTCACAGGATTCTTTCCCGGCTCAGCCTGGCGGTGGTCCGAACACACCCATTGATGGTTACCAGGGCTACACAGGCAGCGGTGCCTATCCCTCACCTGCTGTTCCCCAACCAGATTATGGTGGACAGGGGCAGATGCAGAGACCGCCCTCTCAAAGCAACTCCCAGCCACCTCATCCTGGCACTCAAAATCAAACAGCCGCCGCTGTTGTTGCTGGTGATAACATAAATGTGAGCAATCCCTTTGATGATCCAATTGCTGGCGGTGTGGCTGCTGGTGGTGTAGCTGCTGCTGCTGGAGTTGTTGGTGGTCCGTCACACGGTGCTCCTCCACCGCCCCCACATTCACCGCACACAGCGCCACAATCAAACAATCAACACCACCAACAAGGCATTCCAACGCAGTTGCCGCCGCCGTCACAGCAACCAGCGGCGCCACCACCACAGCAACATGGTCCGCCATCGACTCAGCATGCGCGCCCTGCAACTGGAGTACCCTATCCACAGGGTACCTCTGGGTACCCATCGCCTGTGTCTAGAACGCCAGGGTCACCCTATCCAACACAACCTGGTGCTTATGGTCAATATGGTTCCAGCGATCAGTATAATTCCGGCGCCCCACCGGGCCAACAGTTTGGACCAAATCAGGGACAATATCCGCCGCAGAACCGCAATATTTATCCTCCTTATGGGCCTGAAGCGGAAGCTCCCCCTGCTGGCGCTAATCAATATGGACCGTATGGTAGTCGACCATATAGCCAGGTACCGCCTTCTGGTCCACAACCATCAGCACAGGCCGTTGCTGGTGTGCCACCAGCTAGTGGAACCCCAGTAGCACCACCGAATAGTGGCTATCCACCCGGGACTCCTAATCAACAAGATTATTATAGACCTGATCAAAGTCCTCAACCTCGTCGACATCCTGACTTTATCAAGGATTCGCAGACCTACTCGGGCTATGGTGCACGCCCCCAAATTTATGGTGGCTGGCAAGGTGGCAACCAACAGTATCGTCCCCAATATCCTACATCGTCGGCACCTCAGTCTTGGGGAAACGCACCACCACGTGGTGTTACACCACCTGGCGGCCCTCATGGTCCACACGGACAACAACCAACGGGTGTAGCTCAGTGGGATCAGCATCGGTATCCACCTCAACAGCCCCCACAACCACCACAACAACAGCAGCCGCCATACCAGCAGGGTGCTCCACCTGGACAGCAACCTCAACAGCAGGCGGCACCTCAATGGGCGCAAATAAATGCTGTGCAAGCACCTCCACAGGCGAATATTGCGCAACCAGGATCATCGCTACGACCGCCTCTTGTAAATGCACAGCAACAGAGGATTTCGAATGTAGTCCCCGTTATGTCGCCACAACAGCCGCAAGGGGCACCACAGACAGGGGCACAGCAACCACCACATGGAGGTGTACCACCATCAAGCTTGCCACCAGTGGCTGGTGGTGTCTTGGCGAAACCTCCATATGCTATGCCACCCCCGTCTCAAGGTGGGGGCGTACCACCAGGTCCGGCAATGGTACCAGGTGTTCCTGGCAACATGATCCCTCAAAAGCCACCGCCGATCATTGGACAGGTCATGCAGCCGACACAGCAACAACAGCCTCCGCACCACTTGGCCACCCAGCAACCTGCTTATGGAGCCCAAGTACCTGGTGCCGGAGGTCAGCTGGTTAAAAAGGAGCTCATATTTCCACACGATAGTGTGGAGTCAACCACTCCGGTGCTATATCGGCGTAAACGCCTTACAAAGGCTGACGTCTGTCCCGTCGATCCGTGGAGAATTTTTTATGGCAATGCGATCTGGTCTACTGACTGA
Protein Sequence
MRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGGPMQQPPSVSGPPPMPQHSLPGAPQSQQSQQQQASNSASSASNSPQQTTPPAPPPNQNVNNMATPPPPPQGSTGGYPIPQHMHGSYKMSGPGQSPGAQGYPPQQYPQGNYPPRPQYPSGAYAAGPPPPPTSQAAGGVNNMSSGAQSGYPRSMPNHSGSSPHPQYPPYQWVPPSPQQTGPGVGSGQMGSSMGNHVQGKGTPPPVGPPPPQGSGSPRPLNYLKQHLQHKGGYVANPAAPQPQGYGNGPTAMHPTMPMGPPHHMGPPQSMGPPTSTPPQSMLGAQPVSDSGPEHISQDNGISSSGASSASNLHAVTAVVTTGPDGTPMDEVSQQSTLSNASAASGEDPQCTTPKSRKHDPYSQSHLAPPSTSPHPVVMHGSSGPSGEEYEMNSPPNWPRPVASAQVFNSHVPVQQEPFRSTITTTKKSDSLCKLYEMDDNPDRRGWLDKLRAFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHFDRGDIDPLPIIQQVEAGSKKKTTKAPSVPSPGSSNSQDSFPAQPGGGPNTPIDGYQGYTGSGAYPSPAVPQPDYGGQGQMQRPPSQSNSQPPHPGTQNQTAAAVVAGDNINVSNPFDDPIAGGVAAGGVAAAAGVVGGPSHGAPPPPPHSPHTAPQSNNQHHQQGIPTQLPPPSQQPAAPPPQQHGPPSTQHARPATGVPYPQGTSGYPSPVSRTPGSPYPTQPGAYGQYGSSDQYNSGAPPGQQFGPNQGQYPPQNRNIYPPYGPEAEAPPAGANQYGPYGSRPYSQVPPSGPQPSAQAVAGVPPASGTPVAPPNSGYPPGTPNQQDYYRPDQSPQPRRHPDFIKDSQTYSGYGARPQIYGGWQGGNQQYRPQYPTSSAPQSWGNAPPRGVTPPGGPHGPHGQQPTGVAQWDQHRYPPQQPPQPPQQQQPPYQQGAPPGQQPQQQAAPQWAQINAVQAPPQANIAQPGSSLRPPLVNAQQQRISNVVPVMSPQQPQGAPQTGAQQPPHGGVPPSSLPPVAGGVLAKPPYAMPPPSQGGGVPPGPAMVPGVPGNMIPQKPPPIIGQVMQPTQQQQPPHHLATQQPAYGAQVPGAGGQLVKKELIFPHDSVESTTPVLYRRKRLTKADVCPVDPWRIFYGNAIWSTD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00556994;
90% Identity
-
80% Identity
-