Zlin009807.1
Basic Information
- Insect
- Zaprionus lineosus
- Gene Symbol
- nfxl1
- Assembly
- GCA_035044505.1
- Location
- JAWNNX010000489.1:757386-760472[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 2 2e+04 -8.1 6.4 15 19 152 156 151 156 0.82 2 21 0.13 1.3e+03 -0.3 0.4 4 10 187 193 186 193 0.95 3 21 6.5e-08 0.00066 19.8 15.5 1 18 201 217 201 218 0.98 4 21 0.6 6e+03 -2.4 2.1 6 10 244 248 243 249 0.83 5 21 9.6e-08 0.00097 19.3 15.8 1 18 254 272 254 273 0.99 6 21 0.63 6.4e+03 -2.5 0.8 5 10 297 302 297 302 0.93 7 21 6.6e-07 0.0067 16.6 13.7 1 19 308 328 308 328 0.91 8 21 0.89 9e+03 -3.0 0.5 1 7 352 357 351 359 0.49 9 21 6e-08 0.0006 19.9 12.7 1 18 362 379 362 380 0.96 10 21 0.7 7.1e+03 -2.7 0.4 1 5 389 393 389 398 0.73 11 21 2 2e+04 -5.0 2.3 5 10 403 408 403 408 0.91 12 21 0.00056 5.7 7.2 17.7 1 18 414 431 414 432 0.97 13 21 3.5e-08 0.00036 20.7 14.8 1 19 441 459 435 459 0.90 14 21 0.48 4.9e+03 -2.1 0.6 5 10 486 491 486 491 0.95 15 21 4.6e-05 0.47 10.7 7.4 9 18 504 513 502 514 0.89 16 21 0.2 2e+03 -0.9 4.8 4 11 528 535 526 536 0.85 17 21 0.86 8.7e+03 -2.9 1.4 6 10 590 594 589 594 0.88 18 21 5.1e-07 0.0051 17.0 6.3 1 12 600 611 600 611 0.97 19 21 0.0044 44 4.4 16.2 3 19 640 656 639 656 0.94 20 21 1.7 1.7e+04 -3.8 1.4 8 13 661 666 660 666 0.73 21 21 3e-06 0.03 14.5 9.2 1 16 707 721 707 727 0.92
Sequence Information
- Coding Sequence
- ATGGAAAAGTTCAATAAAGCGCaagctaaaaatatacaaGCTGCGCAAAAACTTGTGGAAACCTACCCATCCAGCTCGGAGGATGAAGGCGAATTggatgaaaatcaaattttagATTTGTTGTATAAACACTATCAAGGGTCAAGAATCGGAACAGCTACCACCAAAAATAATGACAAAAACGCAAACCGCACAGCAAGCTTTCTTGAAAACACCCTGCATTCAGGTGCAGCTACTTGCCTGATTTGCATTGGCAGCATTAGGCGTGTGGAGTCAATATGGTCCTGTAACAGTTGCTATTGTATATTTCATCTCAACTGCATTCAGCGCTGGGCCAATGACAGCGTAAAGCATATGAAAGTTGAGgcggaacaacaacagaacaatCAAGGCTATTACAATAATTTAGGAGAGTACGTGCCCCCAAAGCGTCAGAAGTTGTTGCACTGGTGCTGTCCCCAGTGCCGGAAAGATTATCAACCATCGGAGCGTCCTACACAGTATGAATGTTTCTGTGGCAAGGAAATCAATCCACAGGCACAGCAATTTCTTGTCCCACATTCGTGTGgtgaaatatgtaataaacTACTGCAGCCCAATTGCGGTCATGACTGCAAACTTCTTTGCCATCCAGGACCGTGTCCACCCTGTGCCCAGCTGACGCAAAACTCATGCCTCTGTGGCAAATCTTCACCGCGCTCAGCCCGATGCATCGATAAAAACTGGCAGTGTGAGCAACCGTGTCAAGCTGTTTTGCCATGTGGCAAGCACAAATGCAACCAAAGATGTCACCGTCCCGGTCAGTGTCCGCCTTGTATAAGCAAAAGTTCTCAACCTTGCGATTGTAAACGTGAAGTTAAGGTTGTGAACTGCTCTGAGCCTAAATGGAAATGTAACAATgtTTGCGGTAGTCTTTTTGCGTGTGGCCAGCACTCTTGTGACAAGATTTGTCACACAGGAAATTGCACTGGTAAAGAATGTCCGTACGGTGCTCGTAGCTGCCCCTGCGGGAAGAGCgAAAAACCCAGTGCCTGCAGTGAAGTGGTCGAAACGTGTGGAGATACCTGTCAGAAATTGCTGTCCTGCGGCACCCACACTTGTACGCAACGTTGCCATCGTGGACCATGCAACTTATGTTTGGTGAGAACGAAAAAGAAGTGTCGCTGCGGGTTACATGAGAAGGAGTTACCGTGCTCTAAGGAGTTTACTTGTGAAACAAAATGTAGGCAAATGCGCGATTGTGGGAAACATGCCTGCAACCGAAAGtgtTGTGGAAATCAGTGTCCACCCTGCGAGAAGATTTGcggaaagcaattaaattgcaacaaGCATAAGTGCCAGTCTGTTTGCCACAACGGGCCCTGTTATCCGTGTAAATTGGAGTCTCTAGTTAATTGTCAATGCGGCAAAACGCGACGTACAGTTCCTTGCGGACGAGAAAGAACTGCACGAGTTACCTGCATGGAGCTTTGCCGTATCATTCCAAAATGTCATCATGATGTAAAACATCGCTGCCACAAGGGTGAGTGTCCCCCATGCAATCAACCATGTGGCCTTCCCAATGATACAAGTGGATGTGCACATATTTGCAAAGCTCGTTGTCATGCTGCTATTCGAATACATGATGCGACTGATGCAGCAGTACGACaaaaaaagTACAAATATCGAGCACATCCGCATCCACGATGTGAGGAAGGAGTTGTTGTAACCTGTATCGGTGGTCATGAAGTGGCCACATGGCCCTGTTGGAACTCAAAACCATCATCTTGTCAACGTAAATGTAGTCGGCAGTTAACATGTGGTAATCACACTTGCAGTCGAGTATGTCATCCTGTAGCCAATCTTCAAGACATGCAGCAGCAACCCAGCTGTGCTAACTGTGAGGAAGGCTGTGAAATTCCGAGGCCCCCTGGCTGTCAACATGCCTGTGCCAAACCCTGTCATCCTCCACCTTGTGTCCCATGCAGTTTCaccataaaaaacaaatgccacTGCGGTCTTAACCAAATTGTATATAGTtgcaatgaattttttaatgttgttggaACAGAAGATGAAATCGACCAACGTCGTGAGAAACTGCGTAGCTGTGGCAACCGTTGCCTTAAGAACTTTGCTTGTGGACATCGCTGTATAACCATTTGCCATTCTGGAATATGTCCTAATCCTGAACTTTGTCGTAAAAAGGTGCGCATCTACTGCGCATGCAAGCGAATTAAGCTCGAGGTTTCTTGTGATAAATATAAAGCAGGTCAAATATCATTAGACTGCGATGCCAACTGCCTTGTTCTCCTCTCAAAAGCCAAGGCCTCAGAGGAACATCAATTGGAGCGCAAAAAacgagaagaagaggaaaggaATCGTATTGAACTGGaaaaatttgaacaaaaattCGGTAAACGTAAACCAAAAGAACGCAAAGCTTTTGACATTGAACAACCAAAGACAAGTTACGATTGGAATCGTATTAGTATATACGGAATATCGGTGCTAGTCGTCCTGGGTGCACTGTTCGTGGCTTTATACGCGGACAATTAA
- Protein Sequence
- MEKFNKAQAKNIQAAQKLVETYPSSSEDEGELDENQILDLLYKHYQGSRIGTATTKNNDKNANRTASFLENTLHSGAATCLICIGSIRRVESIWSCNSCYCIFHLNCIQRWANDSVKHMKVEAEQQQNNQGYYNNLGEYVPPKRQKLLHWCCPQCRKDYQPSERPTQYECFCGKEINPQAQQFLVPHSCGEICNKLLQPNCGHDCKLLCHPGPCPPCAQLTQNSCLCGKSSPRSARCIDKNWQCEQPCQAVLPCGKHKCNQRCHRPGQCPPCISKSSQPCDCKREVKVVNCSEPKWKCNNVCGSLFACGQHSCDKICHTGNCTGKECPYGARSCPCGKSEKPSACSEVVETCGDTCQKLLSCGTHTCTQRCHRGPCNLCLVRTKKKCRCGLHEKELPCSKEFTCETKCRQMRDCGKHACNRKCCGNQCPPCEKICGKQLNCNKHKCQSVCHNGPCYPCKLESLVNCQCGKTRRTVPCGRERTARVTCMELCRIIPKCHHDVKHRCHKGECPPCNQPCGLPNDTSGCAHICKARCHAAIRIHDATDAAVRQKKYKYRAHPHPRCEEGVVVTCIGGHEVATWPCWNSKPSSCQRKCSRQLTCGNHTCSRVCHPVANLQDMQQQPSCANCEEGCEIPRPPGCQHACAKPCHPPPCVPCSFTIKNKCHCGLNQIVYSCNEFFNVVGTEDEIDQRREKLRSCGNRCLKNFACGHRCITICHSGICPNPELCRKKVRIYCACKRIKLEVSCDKYKAGQISLDCDANCLVLLSKAKASEEHQLERKKREEEERNRIELEKFEQKFGKRKPKERKAFDIEQPKTSYDWNRISIYGISVLVVLGALFVALYADN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -