Zlin005761.3
Basic Information
- Insect
- Zaprionus lineosus
- Gene Symbol
- srp
- Assembly
- GCA_035044505.1
- Location
- JAWNNX010000247.1:672802-685156[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.6e-17 1.5e-13 50.3 3.7 1 34 861 893 861 895 0.97 2 2 7.3e-18 1.6e-14 53.3 1.7 1 35 983 1016 983 1017 0.97
Sequence Information
- Coding Sequence
- ATGACGAAGACAAGTAAAgccaaggataaggataaaaaTTCAGTGCTGCCGCGTGTTTCCAATAATCTGCTTGCTAGTGCagctaaaatgaaaattactaAAGCGTTAgccaataacaaaaagcaagCAGTTCAGAAGGGAGTGGGCGAAAAGGCAACAGGATCAAATGCAGCAGCATCCACAGCCTCGGCCGCGACACTCAGTCAAGCGCAACAGGCGGTCGTTGTGACAGAGACGACAATAGCAGCGCAGGAGAACGgcgacaactacaacgacgTTGAGAACGGCAACGACGTCGCGCataggcagcaacaacaaaaacatgaaGAACAACGATCAGAAGCAGAGACGCCGGCGTCGACGCGGTCGCCGCTTGCCACAGCGAATTTATCGTCGTCATTTGAGTCGAAGGCTCAAACATCAGTTGACAGCGAAACAGCGAAGCAAACGGTTACCAATATACGAGCGACCGCAACCTTTTCCGAAACAGCGACAACTGCAAAGTCTACGATTTGTGCGGCAACGTTCAATGGTTTTGTTTATAATGAAAACTTAACAAAGTCCCAGCAGCTTCTTAGTGACGTCACGAGTAGTAAATTTGTAGACGAAGGGGCTAATGGCAATCATGATAAAGTCGATCTTAAAGCAGAGAGCGACACAAAGTTAGAGATAACACCaataacagaagcaacaacattaacaacatcGGAAACTAGcgataaatattacaaaatcaTTGATAAGTGTAAAAGTGAGATAAGTGATGAAAACACAACAGCAatactagcaacaacaacaacaacaacaacaccaacaaaagctGCACCTTTGCCGGTTGTagtgataaataataatcagcAAACTGACGCGAGTGAAAGTGTtgacaataaaatcaaaaCCAACTATGCGCATCAACAGcagacgcagcagcaacaaatagaacaacagcagcacatCTATGAGCAACAACAGTTCCTGCAACATCAGTTAAtaagccagcagcaacagcagcaacaacagcagcaacaggagcaacagcaacacgtGAACTGGTTAGGCTACGGTAATTACGCCTACGATTTgactagcagcagcaacaacggagTTGTGACTcccgcagtggcagcaacacaacaagCCAGTCAATCCCAGGATAAAAGCGAGTTGTATGCTTTAGCGGCCTCGCAGCATTTGCTCACACATTTTCCGTACCATCATCCGCATCTATACGAACAGCCgcacagtaacagcagcagcacggATCCCATAATGCGGAACAGTTTCATGGCCTATGGCGTCTATAGTGGCGGTGGAGTTGGTGGCGTTACGGGCGCAACACATGATCCACATCCGTTGCAGCAACATGTTGTTgccgtagcagcagcagcggctgccaaTTCGGTAATAGCGCACACCAcacatgccacgcccaacATCGATGAAGTTATACAGGATACGCTGAAGGATGAATGCTTTGATGACAATCAAAGCTCCAGCTATCACATGCTCACATCCGTATCCGATTTACAGGTGCTAAAGGACCCAAATACAGCGATATACTCAATGACGCACGATCagctgttgcagcagcagcaacacaacctgcaccatcatcatctgtcccagcagcaacagcatcagcagcatcatcatcacaatAACTCAGCCAGTTCTGTGGGGGGTGATTCACCTTCTCCATCGCATGCCCTCTCCACACATGCCAGCGATGTGGCAACGCTGCAAAGCTTCACCCAACTGACAAGTGCATCACCCGGCGGTGGCCTACATCGGGACAGTTACGGCAGCCTTTCGCCGGATCATGGCAACTATTTCACGGCACAGCTCAGCCCCATGCTGCAAAGCAGcTCCGTTTATGCAAGTCCTATGCTTGCTTCGGCCGCCAACGCCATGCAGTATGGCATGCAGGCTGTGGCATcacccacccacacgcacgcccacctgcaacagcaacatcaccaccagcaacatcagcagcaacaacatcatcagcatcacaACTCCACAAGCAGCAGTCCTGGTCCAGTGGGCCTGCTCCACACAAACAGCTCGACAGGCACAGCGACCGCCGCACACAGCTCGCTCCTGGACGATGGCTATGGATCGCCAAAGAGCAGTCACAGTGGCaacggtggtggtggcggtggcggtggcaccTTACCCGCCTTTCAACGCATCGCGCCGACCGGCAGTGGCGGCAATTCCTATGGCAACGGCGTATCCAATGGCTCAAGCAGTGGCGCCGAACGATCTAGCTATGCACCGATGACCAATTACCGCACACACAGTGACGCCTGGAACGGACATTATGACCAAATTAGCTTCGCCCCCGGTGCCACTGGCCAAATGCAATTGAGTAGCAGCGGTGCTGGCGGAGTGGTAACCAATGTGATACGCAACGGAcgcgctgttgctgctgccgctgcagcagccgctgccgttgACAACACCGCCAACGTCGTTGATCCTGCTCGCTTTTTGCCCAATGCCACCCATCTTTCAGCCTCGGCATCGTTGACAGCAACATTGCTCGATGCCGATTATTTTACTGAGGGGCGAGAATGTGTCAATTGTGGTGCGATTTCCACTCCCTTATGGCGACGCGATAACACGGGACACTATTTATGCAATGCCTGCGGCTTGTATCATAAAATGAATGGCATGAATCGACCTTTGATAAAACAGCCTAGAAGATTGGTAAATgtcaacaTGGCCGCTGAATCAGGCGGGGATTTCTATAAGACCTTCCCATTTAACGTGGCCACCGGTAGCCGCAGTAAGGCCTCCACAAATGCCAACAGCGCTGCCGGTTCCAATGCAGGCTCAACGTCAGCAACGACGTCGTCAGCGACATCAACGGCGCTCGACGAGCACGTTAGTCGCGCCAATTCGAGACGCTTGAGCGCCTCCCGTCGTGCTGGCATGTCCTGCTCCAATTGCGAAACCAGCTACACTTCTCTGTGGCGCCGAAATCCTGGCGGTGAGCCTGTCTGCAATGCCTGCGGTCTTTACTTTAAACTCCATAACGTTGTGCGGCCTTTGACCATGAAAAAGGATACCATTCAGAAACGCAAGCGCAAACCGAAGGGCACAAAGAGCGAAAAGTCGAAGAAAATGTGCACTGCCCAGGCGGCAGCACTGGTGGCCAGCAATGCCAATGCCTGCCGGAACGTAGCCATGCAAATGGACGCCCATGGCCAACAAATGGATGTCAATGATGAAATGAAACCACTTGCATATATGTCATACActtcgcagcagcaacaacaacagctacaacaccAACTAAACACCGAGCAACATTCATCGGCGGCAAGCTCGCCCCAAAGCATGGCATCCTGTTCATTATCACCCAATGCAACctctcaacaacaacaacaacaacaacagcagcagcagcaacagcagcagcagctctgtGCTGGCCTGGACATGTCTCCTACATCCTCCTATCAAATGTCGcccataaatatgcaacagcagcagcagcagcaacaacagcaacaatcatgCAGCATGCAACCTTCACCCAGCACTCCAACATCAGCCTTGTCTCACTCTATGTTTTCCACGCCATCCCCCACGCATTTACATagcagtaataataacaacaacaacaacagcaacaacaataacaacaataacaataataataataacaacaacaattcattGTTCAATCATAatgccaataacaacaacaacaacaacaataccaataacaatgaaaataacaaacacattATACAGAAATATCTGCAAGCTCAGCAattgagcagcaacaacaacagcgaccaACAATTGTCGGCACAACAGCAACTTATGCACCTGATTCCGAACAACAttacggcagcagcagctgcagcagcagcggcggcggcggcagcggcgatCAGCACGGTGATCAAAACGGAATCAATCACcaacacgaacacgaacaccaccaacaccagcaccaacgtcaacaccaacaacaacaacaacaacacaaccagcaacaacagcaacatcagcaaacaATTAgctgccacaacagcaacaacaccgacaacgGCATCGAACACACTATCCTCACTGAGtctcaacagcagcaacattatcAGTCTGCAAAATCACTATCAGCAACAGGCGCTTGGACAGACGGAGATGCCCTTGTGTAAATCAATGCTGATGGGACGAGCTCCATCGCCATTCTATTTGAGTACTCTTGTCAATGAGGAGGAACCGGCAATTATTAAGCAGGAGCACATAGATCACCAgcaaacgcagcagcagcagcagctccatcACCAccttcaacaacagcaagaacatcAGCAACATGATGAGTTACTGCTGAGTCGCTCAACATCAATTGACGAACACTATGAGCTAGCAGCCTACCAtcgtcagcaacaacagcaacagcaacagcagcagcagcaacagcaacaacaacagatcaACAGCTACGCGCTACATGCAGTAGCCCAGCAGCAACTCCATGAGTTCAGCCGCAAATATGGCGTTGCCAGCGAGACTGTCGTCAAAATGGAATAG
- Protein Sequence
- MTKTSKAKDKDKNSVLPRVSNNLLASAAKMKITKALANNKKQAVQKGVGEKATGSNAAASTASAATLSQAQQAVVVTETTIAAQENGDNYNDVENGNDVAHRQQQQKHEEQRSEAETPASTRSPLATANLSSSFESKAQTSVDSETAKQTVTNIRATATFSETATTAKSTICAATFNGFVYNENLTKSQQLLSDVTSSKFVDEGANGNHDKVDLKAESDTKLEITPITEATTLTTSETSDKYYKIIDKCKSEISDENTTAILATTTTTTTPTKAAPLPVVVINNNQQTDASESVDNKIKTNYAHQQQTQQQQIEQQQHIYEQQQFLQHQLISQQQQQQQQQQQEQQQHVNWLGYGNYAYDLTSSSNNGVVTPAVAATQQASQSQDKSELYALAASQHLLTHFPYHHPHLYEQPHSNSSSTDPIMRNSFMAYGVYSGGGVGGVTGATHDPHPLQQHVVAVAAAAAANSVIAHTTHATPNIDEVIQDTLKDECFDDNQSSSYHMLTSVSDLQVLKDPNTAIYSMTHDQLLQQQQHNLHHHHLSQQQQHQQHHHHNNSASSVGGDSPSPSHALSTHASDVATLQSFTQLTSASPGGGLHRDSYGSLSPDHGNYFTAQLSPMLQSSSVYASPMLASAANAMQYGMQAVASPTHTHAHLQQQHHHQQHQQQQHHQHHNSTSSSPGPVGLLHTNSSTGTATAAHSSLLDDGYGSPKSSHSGNGGGGGGGGTLPAFQRIAPTGSGGNSYGNGVSNGSSSGAERSSYAPMTNYRTHSDAWNGHYDQISFAPGATGQMQLSSSGAGGVVTNVIRNGRAVAAAAAAAAAVDNTANVVDPARFLPNATHLSASASLTATLLDADYFTEGRECVNCGAISTPLWRRDNTGHYLCNACGLYHKMNGMNRPLIKQPRRLVNVNMAAESGGDFYKTFPFNVATGSRSKASTNANSAAGSNAGSTSATTSSATSTALDEHVSRANSRRLSASRRAGMSCSNCETSYTSLWRRNPGGEPVCNACGLYFKLHNVVRPLTMKKDTIQKRKRKPKGTKSEKSKKMCTAQAAALVASNANACRNVAMQMDAHGQQMDVNDEMKPLAYMSYTSQQQQQQLQHQLNTEQHSSAASSPQSMASCSLSPNATSQQQQQQQQQQQQQQQQLCAGLDMSPTSSYQMSPINMQQQQQQQQQQQSCSMQPSPSTPTSALSHSMFSTPSPTHLHSSNNNNNNNSNNNNNNNNNNNNNNNSLFNHNANNNNNNNNTNNNENNKHIIQKYLQAQQLSSNNNSDQQLSAQQQLMHLIPNNITAAAAAAAAAAAAAAISTVIKTESITNTNTNTTNTSTNVNTNNNNNNTTSNNSNISKQLAATTATTPTTASNTLSSLSLNSSNIISLQNHYQQQALGQTEMPLCKSMLMGRAPSPFYLSTLVNEEEPAIIKQEHIDHQQTQQQQQLHHHLQQQQEHQQHDELLLSRSTSIDEHYELAAYHRQQQQQQQQQQQQQQQQQINSYALHAVAQQQLHEFSRKYGVASETVVKME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -