Basic Information

Gene Symbol
Hivep2
Assembly
GCA_035044505.1
Location
JAWNNX010000499.1:592520-600551[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 8 0.00013 0.011 16.4 0.2 1 23 296 318 296 318 0.98
2 8 0.00029 0.024 15.2 2.9 1 21 324 344 324 348 0.89
3 8 0.052 4.4 8.1 0.1 1 19 973 991 973 994 0.93
4 8 2.6e-06 0.00022 21.7 2.0 1 23 1748 1770 1748 1770 0.99
5 8 1.1e-05 0.00092 19.7 5.3 1 23 1776 1800 1776 1800 0.92
6 8 6.3e-05 0.0054 17.3 3.9 2 23 2250 2271 2250 2271 0.97
7 8 0.00074 0.063 13.9 1.2 1 23 2277 2301 2277 2301 0.91
8 8 0.0024 0.2 12.3 2.7 1 23 2322 2346 2322 2346 0.92

Sequence Information

Coding Sequence
ATGACGCTACAACATGTGGCAAGCGGCGCGTCGAgcgtggcaacaacaaccacagcattgacggccaacaacagcatcggcagcagcaacagcatcggcatcagcctcagcaacagcaacagcaacagcagcaacgtcaatgtcaacaacaacaacagtaacaacatcatcatcaacagcagcagcaacagcaacaacaacagcagcagcaacaacaacaacaacaacaatgacgtgTTGTCGGTGGCCAGTGGCACCGCAGCTCCCGTTTGGACAGGTTCCAACAGTTTGCGTTATTTGCACAAGAAGTTCAAGCGCATGGCCAGCACCAGCGAAGTGGAGACAAGCGATGCACTGCGGACCACATTCCTGTCCTCCAACAGCTCCTTGTCGCCGCCGCCGGTGGTGTCCAAGCTGTTGGTCAATGGGCATGCGATGTCCATGCCGGCGAGTCCGTTGCAGGCGGCCAGCAATGAATATGGTGCCAGCTTTGTGAATGCCAACAACCACGAggagaccaacaacaacaacaacatcaaccacaacagcaaaagcgcAGCTATGGCTGCGTTTGTTGTTACTGCGCCAAGAACACGCACGCCgctaagcaacagcaacaacaacaccaacagtaacagcaacagcaacagcaacagcaactgcaacactaACTATGCGAGCAATGCAACATTGTCGCCTGCAACATTCGCACAGCATCAGCTGCAGACGCAACCAACGttggcggcaacaacagcaacacaatcCGCACCACCGACAACTGTagctgtaacaacaacagcaacagtagtagtagcagcagccgcagtagctgcagttgcagtaacagttgctgcagctgcaacacctGCGGAGAAGTCGGGACGCTACGTTTGTCCCTACTGCGATCTGATCTGTGCCAAGCCATCGGTTCTGCAGAAGCACATACGGGCGCACACCAATGAGCGTCCGTATCCGTGCGACACCTGCGGCATCGCCTTCAAGACCAAGAGCAATCTCTACAAGCATTGCCGCTCCCGGTCCCATGCGGCGCGCATGCGCGGCTACGATGTGCCCGCCCATGAGGCTGACGGACTCTCCGACCAGGATGGCGATGGGGAGCTGAGCAACGGCAGTTCTGAGCTCTTGAGTGTGGACATTCTGAGTCGCGGTGGCTCGCCATACGATGAGCCCATGGCATCGCCAACGCCATCGCCCTCCACGCTGTCCGCCGCCAAGAGCGCCTACTTGCAGCAGCCACCATTGCCGCAGCATATGCAACAATTGCCGCTGGGCTCACCTGCAGCCGGCACCCTGCCACCCGCAACCGCTGACACCCTCCACTCGGCGACCGCGCAACATCGCCAGGCGATCGACTATAAACCCTACAAGCCGAAGTTCCACAACGCGTCGTTGTATGCGCCCGGCAGCagcaaggagcagcaacagcaccagcagcaggcactgcaacagcagctgcagcagcagcaacaacagcagcagcaccaacaggtattgcagcaacagcaacagcagcagcagcaacaacaacagcagcaacaacagaagctcTCAACGCAACAGTCAACGCTGCCACATCCCACCCTCTCGCCCAGCACTCAGATGAAGCTTAACAATCACATCAATTCGCAtcaattgcagctgcagctgcaacagcaacaacagcagcaacaacagcaacagcaactgcacgCACAGCAAACGTTGCTgttggcggcagcagcaaatcCCGCGGTGCTGCCAGCGTTggcgccaccgccgccactgGGCGCGGGTGTCTACTACATGGGGCAGCCGCCGTATTATGGACCAACGGCAGCGGCGATTCATCAACATGCCTTCGCCTTGCAGCagatgcagctgcagcagcacttccagctgcaacatcagcagcaacaacaacaacagcagcagcagcaacactcgCCGTTGCTCAAGGCTCCCACGCAGCAACCACCACAACCCCCACCGCAACagCTGGTGCGTTCAAGCAGTCAACAGGCGGCAACAAGTGCAGGACTACCAGCGgccgccacgcccacaccagCAGCTAACCTCAGCAGCTTTGCCAGCGCCAGCGGTGGCATGCAAGTGAATGTGGAGAAGGTGCAGGAGCACATCTCGAAGCTGATCTCACAGAACGAGGCCATCGTGGAGAACAAGGAGATATTGTTGCAGAAAAAGTACCCGAAGCAGCTGAATCGCTCGCGCAGCttcaacaacgccaacaacagcagtagcagcggctgcagcagcagcagcaacatcagcaacagcagcggcagcgcctcCGCGCATGGCAGTAGCAACCAACAGTTGGGCGAGACCAAAGTGAATCTGGCACAAGCCATAgtacaaaagcagcagctacaacagttgcagcagcagcagcagcaacagcagcaacaacaacagcagcagcaacagcagcaacatcagtaccaaatttatatgcagcagcagcagcaacgcatcagcagcagccctGCCGGTGGCTACGCGCCTCTGAAGGGCACATCGACGCCTTCAACGCCCGCGCCCTCGCCCAAGGTGCAACAGTTGCCGCCGCCACCATCGCCGTTGCCAGTGCAAACGATGCAATATCGCCAGGATCCCGCGACGCAGATGCCCaagctggagcagcagcaacagtcggcGCCGAGTCACGTGCAGCCCCTGAATCTGTCAGcgaaaccaaagcaacaaatgcCAGTGAAGCTAtcgtcagcagcagctgcagtagCCGCAGCAGCGGCTCCAGCAACTGCCGCTGCTCCGGCTAATCCCAAGAGCTCCACAGCGTCCGCTCCGGCGGCACCCAACAATTCGATAATCAAGAATCTGCTCCTGAATGCCCGCGGTTTGGCTGTGCCCATTGGTGAGGGCGACGATGCCGTCTACTCGTGTCCCATTTGCGCGAACGAGTACCGCAGCGCGGATGAGCTGAAGCAACACAATAGCACCTACTGCCAGGATGCGAGTTCCAGTGCACCCATCAGTCCCGCCTCGTCGCCCACCACTAAGTACTTTCGCTCCAATTCCATATCCTTATCGTTGCCGGAGCTGAAGTCGCACATGGCCAACTCCAAGAATCCGCTATCTCTGGCCAAGCTCGCCTGGTCTCAGCTTAAGACCAAGCCCAGCAGCCTGGTTCTGAGTCGCCTCAGTGCCTCGCAGTCCCCCGCACGCACCTCCACAGTTACAGCGACCAGCAAcagtgccagcagcagcaccagcagcagcaacagcaacagcagcaacaatagtcTACtggtaacagcagcaacgacagcaccAGCAACTGCATCAGCAGCTCCAATAGTTGCCACACCTGCACCAGTGGCAGCCATAATCCCGCCCAGCATTGATGCCAGCAGCGTTGCCCTGCGTTTTGTGGACGCGCCGCTGCCCTCGCCCGGTCCGCTCTTGGGTAAGACGCCACTGGTGGATTATGCAGCACCACGCAAGGCCGCAGATACCCAGGTTGTAATTACCAAGATGCACGAGGATCGTCCAGAGAACATCATCATAGAAACGCCCGCCAAACGCTCCAAGCTGAGTAACGATCTCTCCAGCAGCGTCAGCGGCGCCAATAGCAGCGGATCAGCCTTCACGTTGATATCAAACGCGCAGATGATCTTCAGTGGGAACAAGGAGCTGCTTGCGGGTGGCAGCTTGAGTTCCAAGGAGGAACGTTTGCGTCGTTTCACCTCGTCAGGTGGCACAATGATTCCCATATCCGAGTGCCCCGAGTTGGACAAGAGTCCCAAAATGATACGCACTCCATTGCTGTCCGGTGGCAGCTTTCAGGAAGTGTCGCCACGCGTAAGCGACACGAAGGATCGCAAATCGACCGCGGGTAACAATGGATTCCTGCTCAATGCCGGCTCCACATCGCAGCACTTTCAGTTTCCTCCTATCAACCTGATAACCGCCTTCAATCCCCTGACGCTGCCGCCCATGACCAATTCGACCGTCGGAGAGAGCAGCAAATCAATTCCTTATGTGCCCGGAATTCCTGGTCCTGGAAGCTTGTCGTTGCTGCCTCCaccgcagcagctgcagttgcctcAAACGACACGTGGACGTAGCCCTAACCGCAAGCAGCCAAGTCCAAATCCTTTACTGGCAACGGCGGAAGCTCCTCTTAAGGCTCTGTCACCCTTTGGTGGTGTCCAGAACCTTCCCAGCGAGTTCAGTCGTCAGCCTCCGACGCCGGCGCAACGCAATGCGATGCAGtggaacagcagcaataagaGCGCAGCGACTGGAGCTGCTCCAACCACAACTTCGGTGGATACATTAAACAAGAAGCTgccatttaattttctgcGCATGGCGGACAATGTGAAGAGCACCTCGCTGGAGCCATCCACGCAGGAGGTGCGTCATTTCAACTTCGACAATGTGATCAAGCCGCAGGAGGCACTGGCGCCGTTGCATGTGGATACGCCGGAGCAGGAGCTATCCAATAGCTCGACAACCGCCTTGATTACCACCACAACGACTACAACCACCACGACCACGATCAGCGCCAGCTCCAAGTTCTTGCGTCCCACCAGCCTGCCGCTAAAGCCGGGCACCTTCACGCCCAAGCGTCATCATGGGATTACGCCCACGGCTAATACCCTGCCATTGATCTCGCCGGAGACACCCAGACCGTCGAAGTCGTGTGTGCAGCTCTATTTGAATGGACACGCCTACACGTACCTGGGACTCAAGAGCAGCACCAAGATGTTCTACTGTACAGTGAACTGTCCACAGCCCTCGTATGTTGCGGGCATGCACAAGTTGTCCATGTACAGCGTGTGGCAAGTCTGTGAGGAGAATCAGCCACATCCCTTGGGCTTCAAACCGAGGCAGGTGATGGCTCTGTATGATTCCCGGCAGAAGTTCCTGGGCAATGGCTGTGCCACCGCAATGGCGGGCACAGACAAGTTGCATTACGCGCTGGTCAACTCCCAGCAAACGGTCTCGACCTGCTCCACCACGGTCAATGGTCAGAGCAAGTTCTACCAGCATCAGCTGAAGCAGGCGGCACCGACAGCAGCTGGAGCCACTGTACCCACTGCCATTGGAGCACTCAGCGAGGCGAATGTagcagccaaagccaatgaggaggcagcggcagctgccaaGAAATTGGAGACAGGACAACTTCTCGTTGGTGGCTACGAATCGCACGAGGATTACACCTACAtacgtggacgtggacgcgGTCGTTACGTCTGCTCCGAGTGTGGCATTCGCTGCAAGAAGCCGTCGATGCTCAAGAAgcacatacgcacgcacacggATGTGCGTCCGTTCACTTGCAGCCACTGCAACTTCAGCTTCAAGACGAAGGGCAATCTCACCAAGCACATGCAATCGAAGACGCACTTCAAGAAGTGCATCGAGCTGGGCATTAATCCCGGTCCCATGCCTGCAGATGGTGAGTTCCTAGACGTGGATGTGGAATTCGACCAGCAGTCATCCACATCGGCAGGTGGACGCACCTCCTCAATGGCGGGAGAGTCAGATTCGGATGACTACAGCGACAATGAATCCGAGAGTAGCGACACCGATGAGTCCAAATCACGACTTAAGGAGCACGAGGCGGCACGTGGCTTGTTGTCCTTATCCATGACACCACCGATTCCCCAAAGCGTTTCCCCTTATCCAGCCCAGGTGCAGGACACTCCACTACCGGCTGCAAGTCCAGCGAACAGTATTGGTTCCTCGGCAGGTAGCAGCAGCGCCGCCGGCGGCACTCAGCCCAAGCGCTTGATCTGCTCCTTTACGTCACCAAAACCACCATTTGACTACCAAAAGCAGGAACAGTATTACTCCAATCCAGAGGAGTCCAAGCCCAAGCGGGGTGTTCCCAGCGACGAGAGCAGCGCGCCCATGGACCTAACCAAGCCAAGATCCTCATCTGTTATTCTGTCCTCCTCTGCTCCCATTGAGCAGACGCTTCCAAAGTCGCAGGCTCAGCAAATGCGGGACGTAATCTTTGGAACAGGTAACAACGAGTGCGGATTTATGAAGACGTTGATTTCGGTATCGGACAAGGTGCGCATCTCAGCTGAAATGGAGGAGCAGGCTAAGCGCGAAAGCGAGGGCGAGGACGTGCTGCTTCAGACCTACATTAAGGAGCAGGCGCTGCAGAAGGCCAAGATGAAGCAGAGCCAGTACAGTCGCAGCTACCTGGTCACCAGCACcgccaccagcagcatcaATAGCGTTAGCTGTGTAACTACACCGATGGTGACGAGCAGCCCGAACAAGCCGCCATTGATACTCGCAGAACTTCCCAGCATCGAGGTGCATGAGGTGAAGACACCAGACGAAGACATTGCCCCAGCGGTGGCGCTGAAGCCCGCAGAggagcaacaagaaaacaagcagcaaatgaaaaaggaCAAGCCGGTGATTGTCACCAgcacagagcagcagcagcagcagccgcagccgcacaCCCATCACAACGCCAACTTACCGGCTGCAGTGCAGCAGCCGGATGTCAATGACTTCAGTGGCGTCCTGACCAATAGTATCGCGGCAAGCGTGTCGGCACCGACACGTACCGTGATCGTGGGTGAGGAGGGATTCAAGTCAGCTTCTGGTAAAGGTGCCGAGGTGGTGCAGCCTGTCTCGGCGGCAACTGTAGCACCTACTGTTCCAGGCAATTATCCAGCACGCACGGgtccaccgccaccaccaccgatTGCCAGTGATGGGCGTCCCACGTGCCGGATCTGCAACAAGACATTCCAGCGACAACACCAGCTGACGCTCCACATGAACATCCACTACATGGAACGCAAGTTCAAGTGCGAGCCGTGCAGCATTTCGTTTCGGACACAAGGACATCTGCAGAAGCATGAACGCTCCGAGGCGCACAAGAACAAGGTAATGATGACCTCAACCTTTGGCGTCCCAACCACTTCCAATCCGCGCCCCTTCGAGTGCACCGACTGCAAGATAGCCTTCCGCATCCATGGCCATCTGGCCAAGCATCTGCGCTCCAAGACACATGTCCAGAAATTGGAGTGCCTCCAGAAGCTGCCCTTCGGCACCTACGCAGAGATCGAACGGGCAGGCATTAGCCTCACGGAGATCGATACCAGTGACTGTGAGAACTCGCTTATTTCCCTGAAGTTGCTGGCTCAGAAGCTGATGGAAAAGGATCCGAACAAGCTGAGCGGTTACACAACTCCATCGGGCATGTTGCAGCTGGCACCCGATGCCCAAGCCGCTGGCCAGGACAGCGCCTCCGAGGACGGCTTCAGTGCGGCAAATAGCGCCGCCGCCTCGGCGATTGCCTCGCTGGATAATGACAGCGCCGGTAATACACCGAAGCGTGCCAGTTCCATGTCCGAGGATGAAACACTTGCCAATGGACTCAATCATAGTCATGGCCTGAAACGTCGCCTGCCGGGCAGCAGCTTTAGCAGCAACGGTGACGAGAGCGACAATCCCCTGGAGGGTACCGAGAAGCGTGCCAGAAGCAACACCAATGAGTTGCCACTGCCAGCGACGGCATCGACAGCAACGGCCAGCAACTGA
Protein Sequence
MTLQHVASGASSVATTTTALTANNSIGSSNSIGISLSNSNSNSSNVNVNNNNSNNIIINSSSNSNNNSSSNNNNNNNDVLSVASGTAAPVWTGSNSLRYLHKKFKRMASTSEVETSDALRTTFLSSNSSLSPPPVVSKLLVNGHAMSMPASPLQAASNEYGASFVNANNHEETNNNNNINHNSKSAAMAAFVVTAPRTRTPLSNSNNNTNSNSNSNSNSNCNTNYASNATLSPATFAQHQLQTQPTLAATTATQSAPPTTVAVTTTATVVVAAAAVAAVAVTVAAAATPAEKSGRYVCPYCDLICAKPSVLQKHIRAHTNERPYPCDTCGIAFKTKSNLYKHCRSRSHAARMRGYDVPAHEADGLSDQDGDGELSNGSSELLSVDILSRGGSPYDEPMASPTPSPSTLSAAKSAYLQQPPLPQHMQQLPLGSPAAGTLPPATADTLHSATAQHRQAIDYKPYKPKFHNASLYAPGSSKEQQQHQQQALQQQLQQQQQQQQHQQVLQQQQQQQQQQQQQQQQKLSTQQSTLPHPTLSPSTQMKLNNHINSHQLQLQLQQQQQQQQQQQQLHAQQTLLLAAAANPAVLPALAPPPPLGAGVYYMGQPPYYGPTAAAIHQHAFALQQMQLQQHFQLQHQQQQQQQQQQQHSPLLKAPTQQPPQPPPQQLVRSSSQQAATSAGLPAAATPTPAANLSSFASASGGMQVNVEKVQEHISKLISQNEAIVENKEILLQKKYPKQLNRSRSFNNANNSSSSGCSSSSNISNSSGSASAHGSSNQQLGETKVNLAQAIVQKQQLQQLQQQQQQQQQQQQQQQQQQHQYQIYMQQQQQRISSSPAGGYAPLKGTSTPSTPAPSPKVQQLPPPPSPLPVQTMQYRQDPATQMPKLEQQQQSAPSHVQPLNLSAKPKQQMPVKLSSAAAAVAAAAAPATAAAPANPKSSTASAPAAPNNSIIKNLLLNARGLAVPIGEGDDAVYSCPICANEYRSADELKQHNSTYCQDASSSAPISPASSPTTKYFRSNSISLSLPELKSHMANSKNPLSLAKLAWSQLKTKPSSLVLSRLSASQSPARTSTVTATSNSASSSTSSSNSNSSNNSLLVTAATTAPATASAAPIVATPAPVAAIIPPSIDASSVALRFVDAPLPSPGPLLGKTPLVDYAAPRKAADTQVVITKMHEDRPENIIIETPAKRSKLSNDLSSSVSGANSSGSAFTLISNAQMIFSGNKELLAGGSLSSKEERLRRFTSSGGTMIPISECPELDKSPKMIRTPLLSGGSFQEVSPRVSDTKDRKSTAGNNGFLLNAGSTSQHFQFPPINLITAFNPLTLPPMTNSTVGESSKSIPYVPGIPGPGSLSLLPPPQQLQLPQTTRGRSPNRKQPSPNPLLATAEAPLKALSPFGGVQNLPSEFSRQPPTPAQRNAMQWNSSNKSAATGAAPTTTSVDTLNKKLPFNFLRMADNVKSTSLEPSTQEVRHFNFDNVIKPQEALAPLHVDTPEQELSNSSTTALITTTTTTTTTTTISASSKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPSKSCVQLYLNGHAYTYLGLKSSTKMFYCTVNCPQPSYVAGMHKLSMYSVWQVCEENQPHPLGFKPRQVMALYDSRQKFLGNGCATAMAGTDKLHYALVNSQQTVSTCSTTVNGQSKFYQHQLKQAAPTAAGATVPTAIGALSEANVAAKANEEAAAAAKKLETGQLLVGGYESHEDYTYIRGRGRGRYVCSECGIRCKKPSMLKKHIRTHTDVRPFTCSHCNFSFKTKGNLTKHMQSKTHFKKCIELGINPGPMPADGEFLDVDVEFDQQSSTSAGGRTSSMAGESDSDDYSDNESESSDTDESKSRLKEHEAARGLLSLSMTPPIPQSVSPYPAQVQDTPLPAASPANSIGSSAGSSSAAGGTQPKRLICSFTSPKPPFDYQKQEQYYSNPEESKPKRGVPSDESSAPMDLTKPRSSSVILSSSAPIEQTLPKSQAQQMRDVIFGTGNNECGFMKTLISVSDKVRISAEMEEQAKRESEGEDVLLQTYIKEQALQKAKMKQSQYSRSYLVTSTATSSINSVSCVTTPMVTSSPNKPPLILAELPSIEVHEVKTPDEDIAPAVALKPAEEQQENKQQMKKDKPVIVTSTEQQQQQPQPHTHHNANLPAAVQQPDVNDFSGVLTNSIAASVSAPTRTVIVGEEGFKSASGKGAEVVQPVSAATVAPTVPGNYPARTGPPPPPPIASDGRPTCRICNKTFQRQHQLTLHMNIHYMERKFKCEPCSISFRTQGHLQKHERSEAHKNKVMMTSTFGVPTTSNPRPFECTDCKIAFRIHGHLAKHLRSKTHVQKLECLQKLPFGTYAEIERAGISLTEIDTSDCENSLISLKLLAQKLMEKDPNKLSGYTTPSGMLQLAPDAQAAGQDSASEDGFSAANSAAASAIASLDNDSAGNTPKRASSMSEDETLANGLNHSHGLKRRLPGSSFSSNGDESDNPLEGTEKRARSNTNELPLPATASTATASN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-