Basic Information

Insect: Zaprionus lineosus
Gene Symbol: -
Assembly: GCA_035044505.1
Location: JAWNNX010000225.1:286710-291390[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 0.00054 0.046 14.4 1.3 1 23 217 239 217 239 0.97

2 25 0.066 5.6 7.8 3.3 1 23 245 267 245 267 0.95

3 25 0.01 0.87 10.3 0.8 2 23 299 320 298 320 0.97

4 25 0.002 0.17 12.6 4.1 1 23 397 420 397 420 0.93

5 25 0.7 59 4.6 1.1 1 23 460 482 460 482 0.96

6 25 0.011 0.9 10.3 0.5 1 23 504 526 504 526 0.98

7 25 0.0014 0.12 13.1 0.5 1 23 607 630 607 630 0.97

8 25 0.48 41 5.1 4.4 1 23 668 691 668 691 0.94

9 25 7.4e-05 0.0062 17.1 0.2 2 23 718 739 717 739 0.97

10 25 3.2e-06 0.00027 21.4 3.3 1 23 747 769 747 769 0.99

11 25 0.87 74 4.3 0.8 2 23 809 830 808 830 0.94

12 25 0.13 11 6.8 1.6 1 23 919 942 919 942 0.93

13 25 0.022 1.9 9.3 2.9 2 22 950 970 949 970 0.93

14 25 0.085 7.3 7.4 0.5 1 23 979 1002 979 1002 0.91

15 25 0.0005 0.043 14.5 3.6 1 23 1027 1049 1027 1049 0.98

16 25 5.6e-05 0.0047 17.5 1.8 1 23 1056 1078 1056 1078 0.98

17 25 0.17 14 6.5 0.0 2 21 1105 1124 1104 1125 0.93

18 25 0.0048 0.41 11.4 3.0 1 23 1170 1193 1170 1193 0.96

19 25 0.023 2 9.2 0.5 1 23 1230 1253 1230 1253 0.96

20 25 0.00025 0.021 15.4 3.2 1 23 1278 1300 1278 1301 0.96

21 25 2.1e-05 0.0018 18.8 0.1 2 23 1332 1353 1331 1353 0.95

22 25 4.2e-05 0.0036 17.8 2.9 1 23 1359 1381 1359 1381 0.99

23 25 1.1e-05 0.00092 19.7 2.1 1 23 1387 1409 1387 1409 0.97

24 25 2e-06 0.00017 22.0 2.4 1 23 1415 1437 1415 1437 0.99

25 25 0.00063 0.054 14.1 0.3 1 21 1443 1463 1443 1467 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	0.00054	0.046	14.4	1.3	1	23	217	239	217	239	0.97
2	25	0.066	5.6	7.8	3.3	1	23	245	267	245	267	0.95
3	25	0.01	0.87	10.3	0.8	2	23	299	320	298	320	0.97
4	25	0.002	0.17	12.6	4.1	1	23	397	420	397	420	0.93
5	25	0.7	59	4.6	1.1	1	23	460	482	460	482	0.96
6	25	0.011	0.9	10.3	0.5	1	23	504	526	504	526	0.98
7	25	0.0014	0.12	13.1	0.5	1	23	607	630	607	630	0.97
8	25	0.48	41	5.1	4.4	1	23	668	691	668	691	0.94
9	25	7.4e-05	0.0062	17.1	0.2	2	23	718	739	717	739	0.97
10	25	3.2e-06	0.00027	21.4	3.3	1	23	747	769	747	769	0.99
11	25	0.87	74	4.3	0.8	2	23	809	830	808	830	0.94
12	25	0.13	11	6.8	1.6	1	23	919	942	919	942	0.93
13	25	0.022	1.9	9.3	2.9	2	22	950	970	949	970	0.93
14	25	0.085	7.3	7.4	0.5	1	23	979	1002	979	1002	0.91
15	25	0.0005	0.043	14.5	3.6	1	23	1027	1049	1027	1049	0.98
16	25	5.6e-05	0.0047	17.5	1.8	1	23	1056	1078	1056	1078	0.98
17	25	0.17	14	6.5	0.0	2	21	1105	1124	1104	1125	0.93
18	25	0.0048	0.41	11.4	3.0	1	23	1170	1193	1170	1193	0.96
19	25	0.023	2	9.2	0.5	1	23	1230	1253	1230	1253	0.96
20	25	0.00025	0.021	15.4	3.2	1	23	1278	1300	1278	1301	0.96
21	25	2.1e-05	0.0018	18.8	0.1	2	23	1332	1353	1331	1353	0.95
22	25	4.2e-05	0.0036	17.8	2.9	1	23	1359	1381	1359	1381	0.99
23	25	1.1e-05	0.00092	19.7	2.1	1	23	1387	1409	1387	1409	0.97
24	25	2e-06	0.00017	22.0	2.4	1	23	1415	1437	1415	1437	0.99
25	25	0.00063	0.054	14.1	0.3	1	21	1443	1463	1443	1467	0.91

Sequence Information

Coding Sequence: atgttacCAAGCAATATTTGTAGAACATGTGCTCTGCAGAACGACAATTTATTATCTCTATCTACGCGTAGTCAAAAAGCAAGTAAAAGTGTCAGCGACGTGTTGCACGAACTAACGCAGATCGATcCTCTGTTGGAACAAAACGATGAAAATCTACCGCAACATTTGTGTACTGCATGCTTGCATAAGCTTGAAGATGCCTATGCTTTTGTTGTACAGGCGCGTCAGGTACATGAGCAACTGTTGCTCAAGTTACGGTGTGGAATGCAAACGGAATGCCTTGATGAGACACCTATAGAGATTTCAATGCAGCATATAAAGACTGAAGTGGAAGTAAATGTGATTACGCATtcaactaaaatatttgaaaacaaaactgCAGCTGGCGATAAAAATAGCGACTCTTACAACTCTTCAGCTATTGAACTAAAACAGCAGCTTAAAAATGATTGTGAGATTGGCGAAGATATTAGCTTGGAAGCAGAGCTCAAGCCCGCACAACTGCGAAGAAGTACACGTAATGTAAAGCCTGCCACAGATAGTGAAAATGATTCGAcATCTGTTAACGAGAGACTTGAACCAGTGAAGCGGCGTCGTGGTCGCCCACCAAAACTACCCAAAACTGAATCAAGAAACGAAGATGGTCGTCACGTATGTCAGGAGTGTGGCAAAACGTTCTCATGGTATCGTGACATGCAACGCCACGCCCGTATACATTTTGAGAAAGCCTCGTACAAATGTGATACATGCAATAAAAGTTTTCTGCGTAAGgataagtttatttttcacCTGCAATCACACAAAAAAAGTCAGGGGAAGATACAGACAACCAAAGCTCCAAATGAGTGGAGTTTTGCGGAGCGCCTTTACAGCTCAGGTCCATTCAATCGCATCGAGTGTAAGTTGTGTGACTTAAAGTTTCATGGCATTCAGGATTTACGCGAACATATGAACAGCCATCTTACAGTTGACACATTATCCACTTTTAACATTGATAACGATTTTGTTAGGGAAGAGTTTTGTGGTCAAGAAAAGGACTTAGACTTGGATAAAATCAAGCAACAGGTGTGTGCTGAAATTTCCAAGGGTCGCGAATATCTGGATAAATACTGTGCTGTAGTCAATGATCATGGATACGAATTGTGTCTAAGCGATACAGATGACGAGAGGCCCAACACATCATCTGCCTATGAATGTGAATTGTGCGACGAGTCCTTTACACGTAAATGCCATATAATGAAACACACTCTGGACAGGCACACTCAATCGACTACTGAAACGTCTGTGAAACGATGCAACATCTGCCGGATTGGCTTTGTTTGCTTAAGATTTTTGGAGCAACACCAGCGGACACAGTGCCACAATCAACTTAAACGATATACATGCCCGAGATGCCCTGGGAAGTTTATTTGGCTACAGAATCTAAAGGAACACTCCTGTTCTCATCAAACGTTCAAGAAAAAGGACATGGCAGACGGCGAGAAGCAGCTAGAGAATAAAAACAACCAATTCCAGTGCTCCTTGTGTGATAGTCAACTAAAAAGCATGAGACAACTACGTGCCCACTTGGCGACGCACATCGATGGGCACACTGGCATAGATCCCGATAAATCCGCTGCATTTTTCCGTGTCTTCTATCCCGATGGCCTTGATAGCAGTTTGTCAGAGCTCGCTGCACGCATTGCTGAAGACTTTAAGGCTGGTGATTATGGGCGTTACTTTAATGCCTGCTCCCCAAGTGGTCAGGAGTTTGATTACTTCCACTCTGACACAGACCTGAGCGATACGGATGCAGAACATGCAGCTTCGTCGACAGTGTATACCTGTGGACTATGTAATGCAACCACAATACGCCTCTCCCAGCTTCTTCAGCATCAGCAATCGAAACACAGCCATACGATCACAATGCCCTATGTCTGCATCGACTGTGATGTGGGGTACGTGGCTGAGCCGCTACTGCAGCAGCATTTCCGACTGGCTTGTGCCAATCCGCATGCGAAGTATCACTGTCAGATGTGCAAACTCCACTTTGTGTGGCAAACAAATTTCAGGCGACACCTCGAGCTGTTGCATTCCACAGAGGAGCATCTGATGGAAAAGGGGTCAACGATCAGTCTGAAACCCAAACGCCAATCCACGTCTGCTAGGCTTCAGTGCGATGAGTGTGATAAGgttttcatttggccaaaggATTTGACGCGCCACAAACGCATTCATCAACCACAGGCGTCAGCGCAGTACCAATGCGCATACTGTGAAAAAAAGTTTCATCGAAAGGACGGACTCAAGTCACATATGCGAGTGCATGGAGAGCAACAACTAGACGAGGTGCCCATGTCATTGTTAGAGCAACAGTCGCCTACGATGCAAAGCGTGCCTGTGATCTTGACCCAACTCTGCAGTCCCAATGGCTGCAAGCAAATCCAGTGCCAAATTTGCCAGTCTCGTCACGCCAAGATTTCCGATTTGCGTGCTCATTTACTTACCCATCAGTTTGGAATCAAGCATTTGGAGGAATGTGAAGGCTCTGATGACATTACAAGGATGTCTCGCACTCTTTATCCGGAATTGGGCTCAACGTTGAATAAACATCAGCTAATTGAGCGAATCCAAGCCGACGTGGCAACGGGTATTGATCTAGACAGATTTACATCCATCACTAACGAGACGGGAATGGAGCTAAGTTTGGACAGCAGTGAGACGGAAACAGATTCAGACTCATTTGAAACGGAAGGAGGCAGCAACGCCCGAATATACAGTTGCGATCTTTGCCAGTTTAAAGCACCTCGTAAACATCAACTGTATGCACATCAAGTCAACCAACATTCACATGACAAAGCAGCCTGCGTCTGTAACCACTGTCAAGCGAGATTTGTGAGCGAACAGTTGCTGGAACATCACTACCGCTCGCTGTGTCGCAATGCACATAAGCGTTTCCTTTGTCGAAAATGTCCTTTGCGTTTTCGTTGGCGCGACAACCTCAAGCTGCACACGGACATAGCGCATCAGGAACAAGCTGGAGAACAGTCGAGCTTGGAAAATTCATTGAAGGGAACTCATCTGTTGCCCATTGTCAACTACCACTGCGGTTTGTGCAATCGCAACTTTAAGATGCAGAAAGATCTTACGCGTCACACTTTGATGCATGCCCAGGAGTCGAGCATCTATCGATGTCGTTGGTGTGCGCGTCGCTTCTATCGAAAGAGTAATCTTCTGCAGCACATTGAGCGTCATGGTATAAGTGCCGTTCAACTTCCTTATGCTGAGTCGGTTCTCAATTCCAGTCGCCATCCACATGGCGAGAAGAATATCCAATGCAAAGTCTGTGACGTGCGCTATGACTCTATTGCCGCCCTGCGATATCATTTGCTTTCCTCGCCTGCTGGCAGCCATCACGACATTGGGTCGATGCTCAACTACTCGATCACCAATCAGTTGGGCTACGAACTGACTCTGGATGATTCTGAAACCGATGAGGAAGTGAAGCCGGCGGGTACGCCTACACATTATACTTGCAGCATGTGTCAGCTTCGTTGTGTTCGGAAGTACGAGCTGTATCAGCATCAGCAAGCCATGCACCGACTGGAGCGGATAAGCGATGGCTGCGATCGGTGCATATACAAAAGTGTCTCACTGGATCTTATTGCCTATCACCAGCGTGTTCAGTGTTGCAATTCGGAAAAGAAGTTCAAGTGTGTTCGGTGTGGTTTCAAGTTTATGTGGGCGTCAAATCTATTGCTGCACATGCAGTTGCAGCATCCAAGTGATGAAGGGCAGGCTGAAGCCAAACCTGCAGAGGAATCAACTACAACAAGCGTTGAATGTCAAGTATTTCAATGTGGTCAATGTCCACGTAAATATAATCGCAAAGACCGACTCACGGCACATGTGAAAAAGCATCATGTCTTGGGAGCGAATTCCCCAGCAGAAGATCTTATTGAATCGAAAACTTCTTTGGAACCATCAGTGGCCGCAAAGCAACAGAAAAGATTTCTTtgtgcattttgtggcaaAGCCGTAAGCTCCTCATCGAATCTTGTTATACATATTCGACGTCATACTGGCGAGAAGCCTTTCAAATGCGATTATTGTGACATGGCCTTTCCACGCTCGTCGGATCTTCAGTGCCACCGACGTACACACACAGGTGAGCGGCCACACGTTTGCACAGTTTGTCGGAGGGGATTTGCACGTTCCTATAAATTACAACAGCATATGCGAATTCACAATGGCGAGCGTCCGTACAAGTGTACTTTTTGCGAAAGGAGTTTCACCCAGTCGAATGATTTGACCCTACACATACGAAGACACACCGGCGAACGTCCTTACCAATGTAACACCTGCGGCGAGCGGTTTATTCAGGGAACAGCACTTAAAAACCATCGACTGCAAAATGGCCACTTCGAAACAGAGGAAGTTCAGGATAAAtaa
Protein Sequence: MLPSNICRTCALQNDNLLSLSTRSQKASKSVSDVLHELTQIDPLLEQNDENLPQHLCTACLHKLEDAYAFVVQARQVHEQLLLKLRCGMQTECLDETPIEISMQHIKTEVEVNVITHSTKIFENKTAAGDKNSDSYNSSAIELKQQLKNDCEIGEDISLEAELKPAQLRRSTRNVKPATDSENDSTSVNERLEPVKRRRGRPPKLPKTESRNEDGRHVCQECGKTFSWYRDMQRHARIHFEKASYKCDTCNKSFLRKDKFIFHLQSHKKSQGKIQTTKAPNEWSFAERLYSSGPFNRIECKLCDLKFHGIQDLREHMNSHLTVDTLSTFNIDNDFVREEFCGQEKDLDLDKIKQQVCAEISKGREYLDKYCAVVNDHGYELCLSDTDDERPNTSSAYECELCDESFTRKCHIMKHTLDRHTQSTTETSVKRCNICRIGFVCLRFLEQHQRTQCHNQLKRYTCPRCPGKFIWLQNLKEHSCSHQTFKKKDMADGEKQLENKNNQFQCSLCDSQLKSMRQLRAHLATHIDGHTGIDPDKSAAFFRVFYPDGLDSSLSELAARIAEDFKAGDYGRYFNACSPSGQEFDYFHSDTDLSDTDAEHAASSTVYTCGLCNATTIRLSQLLQHQQSKHSHTITMPYVCIDCDVGYVAEPLLQQHFRLACANPHAKYHCQMCKLHFVWQTNFRRHLELLHSTEEHLMEKGSTISLKPKRQSTSARLQCDECDKVFIWPKDLTRHKRIHQPQASAQYQCAYCEKKFHRKDGLKSHMRVHGEQQLDEVPMSLLEQQSPTMQSVPVILTQLCSPNGCKQIQCQICQSRHAKISDLRAHLLTHQFGIKHLEECEGSDDITRMSRTLYPELGSTLNKHQLIERIQADVATGIDLDRFTSITNETGMELSLDSSETETDSDSFETEGGSNARIYSCDLCQFKAPRKHQLYAHQVNQHSHDKAACVCNHCQARFVSEQLLEHHYRSLCRNAHKRFLCRKCPLRFRWRDNLKLHTDIAHQEQAGEQSSLENSLKGTHLLPIVNYHCGLCNRNFKMQKDLTRHTLMHAQESSIYRCRWCARRFYRKSNLLQHIERHGISAVQLPYAESVLNSSRHPHGEKNIQCKVCDVRYDSIAALRYHLLSSPAGSHHDIGSMLNYSITNQLGYELTLDDSETDEEVKPAGTPTHYTCSMCQLRCVRKYELYQHQQAMHRLERISDGCDRCIYKSVSLDLIAYHQRVQCCNSEKKFKCVRCGFKFMWASNLLLHMQLQHPSDEGQAEAKPAEESTTTSVECQVFQCGQCPRKYNRKDRLTAHVKKHHVLGANSPAEDLIESKTSLEPSVAAKQQKRFLCAFCGKAVSSSSNLVIHIRRHTGEKPFKCDYCDMAFPRSSDLQCHRRTHTGERPHVCTVCRRGFARSYKLQQHMRIHNGERPYKCTFCERSFTQSNDLTLHIRRHTGERPYQCNTCGERFIQGTALKNHRLQNGHFETEEVQDK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -