Zlin008549.3
Basic Information
- Insect
- Zaprionus lineosus
- Gene Symbol
- kn
- Assembly
- GCA_035044505.1
- Location
- JAWNNX010000413.1:20825-22789[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.1e-119 1.1e-115 387.4 0.0 205 384 1 209 1 213 0.99 2 2 6.5e-07 0.0022 16.5 14.6 424 518 216 309 209 329 0.59
Sequence Information
- Coding Sequence
- ATGAGAAGATTTCAGGTCGTGATCTCCACACAAGTGGCCGTAGATGGGCCACTGCTGGCCATCTCGGACAACATGTTCGTGCACAATAACTCGAAGCACGGGCGACGCGCCAAGCGACTGGACACAACGGAAGGTACAGGCAACACATCCCTGTCCATTTCCGGTCACCCCCTAGCGCCCGACAGTACCTACGATGGTCTCTACCCACCGCTGCCTGTGGCCACGCCCTGCATCAAAGCGATATCGCCCAGCGAGGGATGGACAACGGGTGGAGCGACGGTGATCATTGTGGGTGACAATTTCTTTGACGGATTGCAGGTTGTCTTTGGCACAATGTTGGTCTGGAGCGAGCTAATCACCTCACACGCGATACGTGTCCAAACTCCACCGAGGCATATACCCGGCGTCGTTGAGGTGACGCTCTCCTATAAAAGCAAACAGTTCTGCAAAGGATCACCCGGACGTTTCGTCTATGTCTCAGCACTCAATGAACCTACAATTGACTACGGCTTCCAGCGACTGCAGAAGCTCATCCCCAGGCATCCTGGTGACCCGGAGAAGCTGCAGAAGGAAATCATATTGAAACGTGCTGCGGATCTTGTCGAGGCACTCTACTCAATGCCCAGCAGATCACCTGGCGGCTCCACCAGCTTCAACTCGTATGCAGGACAGCTGGCGGTTAGTGTTCAGGATGGCACTGGCCAGTGGACGGAGGATGATTACCAACGTGCCCAGTCAAGTAGTGTGAGTCCACGTGGTGGCTACTGCAGCAGTGCCTCAACGCCGCACAGCTCTGGCGGCTCCTATGGCACCACAGCAGCCACCGCCGCGGTTGCAGCAACGGCGAACGGCTACGCGCCGGCTGCCAATATGGGCACGCTCTCATCCTCGCCCGGCAGCGTCTTTAACTCCACATCAATGTCCGTGTCGACGCCTTGGCACTCGGCCCTTGTGCAGCATCATCACGCCACCGCCGTCGCCCACCCGCATCAttatccccatccccatcagCCTTGGCACAATCCTGCCgtgtcagcagcaacagcggcggccGTTTAA
- Protein Sequence
- MRRFQVVISTQVAVDGPLLAISDNMFVHNNSKHGRRAKRLDTTEGTGNTSLSISGHPLAPDSTYDGLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPSRSPGGSTSFNSYAGQLAVSVQDGTGQWTEDDYQRAQSSSVSPRGGYCSSASTPHSSGGSYGTTAATAAVAATANGYAPAANMGTLSSSPGSVFNSTSMSVSTPWHSALVQHHHATAVAHPHHYPHPHQPWHNPAVSAATAAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00530692;
- 90% Identity
- iTF_01549315;
- 80% Identity
- -