Zlin018600.1
Basic Information
- Insect
- Zaprionus lineosus
- Gene Symbol
- retn
- Assembly
- GCA_035044505.1
- Location
- JAWNNX010000705.1:242306-259131[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.8e-26 1.1e-22 80.4 0.0 2 89 340 425 339 425 0.96 2 2 1.8 3.3e+03 -1.3 0.1 11 38 571 606 519 622 0.59
Sequence Information
- Coding Sequence
- ATGATCAAATCACATAATCTTCAGTCCAATAAACTTATCTTCTCCCCATTGTCTTTTCCTCTCCTGCAGTCCCACGGCGATCGTACGGATGACGAGATGCGCGACTGCGACTCCGTGGACGGTGAACATCATCAGCTGAGCGCCAAGGCGGCGATTGCAGCGCGTCTCAGTCACACAGTTGCCGGCGGCGGTGGCCTTAACTTTGCCAGTCCGGGAGAGCCAGCCGATCTGCCACTCAGccatcaccatcagctgCCACCCAATCATCCGCTCAACGCTCTGGGCAGTTTCATGGGTATCGGCGGACTACACAGCATTCCAAGTCTCCAGCACAGCGATGTCCTGGAGAAGCTTAAGATGCAAGTGCGCGACATGAAAGTTGGCCTCATGGAGCAGGACTATGCGGCGGCGGCTCACGCAGCGGCGTTTGGGGCAAACATGCTACCCACGACGATCAGTTCGGCCTTCCCGTTGCCACACAActcggtggcagcggcagcggcagctgcaacatttggTCATGCAGCAAGTGCGCCCGTGCCGTCAGCCAATAATGGCGCCAGCTATAATGGTGCCACTGGTGGAGCTGGAGGTGCAAATGGTGGAGTGGCAGGAATCGTTGGTgcaaatgcagctgcagctttggGTACAAATACGAGCAACAGTAATGGAGGATCAACAGCAGGAGGCGGTGCCGTGACTATGGGTGGTGGTGTTGGGGCTGGAGGAGGTGGAGTTAACAACAGTAATGCCGGCAatggaaataacaacaacaacaacaacaacaacaacaacaacagcagcaacagcagcagcaacaacaacaacaacagcgccaaTGGACATCCCTTCTCATTTGCATCGCCGACAGCGCCAAGCGCCAAAGAAGCTAATTCCGCATCGAACTCATCGACGTCCAGCGAGGCATCCAATTCATCCCAACAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTATGAAATTAATGATGATCCCAAGCGAAAGGAGTTCCTCGatgatttgttttcatttatgcaAAAACGCGGCACGCCCATCAATCGCCTGCCCATAATGGCGAAGTCGGTTCTGGATCTATATGAACTATATAATCTGGTGATCGCACGGGGCGGACTCGTGGATGTCATCAACAAGAAGCTTTGGCAGGAGATCATCAAGGGACTGCATCTGCCTTCGAGCATCACCAGTGCTGCATTTACGCTCCGCACACAATACATGAAGTATTTGTACCCATATGAATGCGAGAAGAAGAATCTCAGCACACCGGCGGAGCTGCAGGCGGCCATTGATGGCAACCGCCGCGAAGGACGCCGTTCCAGCTATGGTCAATATGAGGCTATGCACAATCAGATGCCACTGACTCCTATTTCGCGACCACCGATGCCgggtggcatgcaacaaatgTCGCCACTGGCACTGGTCACACACGCCGCAGCGGCTAATAATCAACAGGcacaagcagcggcagccgctgcagcagcgcaCCGCCGACTGATGGGTGGTCCAGCGTTCGGTCAGATGCCGAATCTGGTGACACAAGAGATTGAGAATCGCATGATGGAATATCTTCAGCTAATGCAGGCCAAGAAGGACCAGGGTGGCCCAGTCCTGGGCGCCACACATccccaccagcagcaacagcagcagcagcagcagcaacaacaatcgctccaccatcaccagcaacagcagcagcaacagcagcggcagcgctcCCAAAGCCCCGAGCTGAGCACGCGCGACGCACTGAGTGCGCAGGTAGCCCTGTGGCACATGTATCACAACAGCAGTCCAACCGGTTCGGCACACACCTCACCACAGCAACGCGAAGCGTTGAACCTCTCAGATTCGCCGCCGAATATTCATTTGAACCACATAAAACGCGAACGTGAACGTGATCCAACGCCGGAGCCGGTGGATCATGAGGACTCCCCACACCAGCCACCGCCAGCTAAACGTGTGGGCAGCGGTCTAATGCCTCCCGGATTTCCTGCAAACTTCTATTTAAATCCACACAACATGGCAGCtgtggccgctgctgctggattTCATCATCaggcaagcagcaacagccatcatcatcatcaccagcagcaacaggatgCTGCATCGGAAGGCGAACCAGAAGATGACTATGGAAATGCGGAGCACAATACCACAGGCAATTCGTCGACTATGCATGACGACAATGAGCCACAGCAGTTGAATGGACACCACCAcctccatcatcatcatcatcatcatcataaccAGAATCATTTGGACAAGTCCGATGATTCGGCCATTGAGAACTCACCTAGCACTTCCACAACGGCATCAGCTTCGGGTGGCCATCGTCACAGTTCGCCGGTGTCCACTAAAAAGAAGAGTGCCAGCAACAAAACTCAATCCAATCCCAAGGACACGCAGCACGAcaactgcagcggcaacagcgccAAGCTAAATCCCCTCGAGACACTCAGCCTTCTGTCGGGCATGCAGTTTCAAGTAGCACGCAATGGCACCGGCACAAATGGTGAACAGCAGTTGATTGTCAATCTGGAGCTGAATGGCATTAAGTACTCGGGTGTGCTGGTGGCGAATGCAACCAGAGCAACGGACCAGCAGAGCCACAACGAGGACACAGATACACCGAATGCGACCAAGAGCGAGGAGCCATCCCCAACTGAGGAGGCTGGCAATGCGGTCAAACAGGAGACTAGCCAGGAAGTCATTCAGATCCAAAACGAGGAAATCGACGATGAGGATGCGGCACAGACCGCAGATGACATTGTGAATGGAAGCAACAGTGGGACAACAAATGTTGGTGCGGGCTCAGGATTGGtaatgggtgtgggtgtaggtgtaggtgtaggtgtaggtgtgggtgtgggtgtgggtgcagGTGCAAATGCTGTGGGGGGTGTTGGTGGCAATGTGGCTGTGGGCGTATCACTGCTTAAAGATGCTGTGGTCGGTTCATAA
- Protein Sequence
- MIKSHNLQSNKLIFSPLSFPLLQSHGDRTDDEMRDCDSVDGEHHQLSAKAAIAARLSHTVAGGGGLNFASPGEPADLPLSHHHQLPPNHPLNALGSFMGIGGLHSIPSLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGANMLPTTISSAFPLPHNSVAAAAAAATFGHAASAPVPSANNGASYNGATGGAGGANGGVAGIVGANAAAALGTNTSNSNGGSTAGGGAVTMGGGVGAGGGGVNNSNAGNGNNNNNNNNNNNNSSNSSSNNNNNSANGHPFSFASPTAPSAKEANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPPMPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLMQAKKDQGGPVLGATHPHQQQQQQQQQQQQSLHHHQQQQQQQQRQRSQSPELSTRDALSAQVALWHMYHNSSPTGSAHTSPQQREALNLSDSPPNIHLNHIKRERERDPTPEPVDHEDSPHQPPPAKRVGSGLMPPGFPANFYLNPHNMAAVAAAAGFHHQASSNSHHHHHQQQQDAASEGEPEDDYGNAEHNTTGNSSTMHDDNEPQQLNGHHHLHHHHHHHHNQNHLDKSDDSAIENSPSTSTTASASGGHRHSSPVSTKKKSASNKTQSNPKDTQHDNCSGNSAKLNPLETLSLLSGMQFQVARNGTGTNGEQQLIVNLELNGIKYSGVLVANATRATDQQSHNEDTDTPNATKSEEPSPTEEAGNAVKQETSQEVIQIQNEEIDDEDAAQTADDIVNGSNSGTTNVGAGSGLVMGVGVGVGVGVGVGVGVGAGANAVGGVGGNVAVGVSLLKDAVVGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -