Zlin006350.1
Basic Information
- Insect
- Zaprionus lineosus
- Gene Symbol
- lz
- Assembly
- GCA_035044505.1
- Location
- JAWNNX010000294.1:13302-25781[-]
Transcription Factor Domain
- TF Family
- Runt
- Domain
- Runt domain
- PFAM
- PF00853
- TF Group
- Beta-Scaffold Factors
- Description
- The AML1 gene is rearranged by the t(8;21) translocation in acute myeloid leukemia [1]. The gene is highly similar to the Drosophila melanogaster segmentation gene runt and to the mouse transcription factor PEBP2 alpha subunit gene [1]. The region of shared similarity, known as the Runt domain, is responsible for DNA-binding and protein-protein interaction.In addition to the highly-conserved Runt domain, the AML-1 gene product carries a putative ATP-binding site (GRSGRGKS), and has a C-terminal region rich in proline and serine residues. The protein (known as acute myeloid leukemia 1 protein, oncogene AML-1, core-binding factor (CBF), alpha-B subunit, etc.) binds to the core site, 5'-pygpyggt-3', of a number of enhancers and promoters.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3 3.7e+03 -2.4 1.2 49 73 59 83 53 96 0.72 2 3 4.3 1.2e+04 -4.1 0.7 66 84 105 123 87 128 0.50 3 3 2e-70 5.9e-67 223.3 0.0 5 129 134 258 130 258 0.98
Sequence Information
- Coding Sequence
- ATGGTAACATCTTCAGCATCGCCCACAGGGACGGGTTGGTCAGCTCCTGCAGAATATAAAAGCGCCACTTCAGCTGTTGCAGCTacaacgacagcagcggcTGGTGTCATGTGCGAAGTGTTGCCATCTAGCACTACCAGCATTGGCAGCAGCTCGCCAACAGGAGGAGCCAGCAACGGTACTGTCAATAGTGCACATAgtggaagcaacaaaaatacaagtctttcaataaataataacaacatcaacaacagcaatactaatactaataataataataataataataataataataatagtaataacaataacaatagtaataataataatagcactaataataataatgcagtACATCAGGATCTTATATGGATGGAGAGATTTGTGTTGGAAAGGCAACAAGAGTATCCAGGAGAATTGGtgCGTACAAGTAATCCGTATTTCCTCTGCTCCGCCTTGCCATCTCACTGGAGATCGAACAAAACATTGCCGTTGGCTTTTAAAGTTGTCGCCCTGGCAGACGTTGGCGATGGTACCTATGTAACTATTCGGGCAGGAAATGATGAGAACTGCTGCGCTGAACTGCGAAACTACACAGCGCAGATGAAGAACGGTGTGGCCAAATTTAATGATTTGCGCTTCGTAGGACGTAGTGGTCGAGGAAAGAGCTTTACACTCACAATTACCGTTGCAACGAGTCCACCGCAGGTGGCTACCTATGCGAAAGCCATCAAAGTTACTGTTGACGGGCCAAGGGAACCTCGCTCCAAGACAAGTTCTCCAGGCAATCCCCAATACACAGCTCTTCGCTTGGGCCAGCGACCGTTTATAGATGGTTTCCCAAAAACATTTCACGAACTGGAAACTTTGAGACGCTCCGCAAAAGTAGCAGCGGCCACGACTGCAGCAGCCGCGGCAGCATCGGTTGCAGCATCTGTTACATCTACAGACGGTTCTTTAACCACGAGCGTAAGCATTTCCCAGCAATTGGGCAGCAATTATTCATCTTCGAATAGCACAATTAATTCGGACTGCTACAAACCCAATGCGCCTCAGATTCAAGaaacCGAATTAATAGGAGCAGCTGAGTGGACAGGCTCAGCGAATTGTGGTGCTAACGTTGCCTATTCCGTGGGAATGGCTGTTCCATATCATCATGCACATCATACTCACGCTCACAGCCATTCGCATTCACACAATCATGCAACACATCACCATCATGCACACCACTTACAGCACCAAGTGCCGTTACCGCCTCCCCCGCCACCACCAGCCGCAGCTCCTGTGCCCGTACCCAACACAACAGCTATGAATCACTACGGCAGTGCTATGGGAAGCTATGAAACAACCTCGTTGGACGCGGGTAATTATCATATATCGACGGTACTTCCAGATATGCACGGCTTTTCAACGGATCCGTATCAAACTGCTGCCGCCGGCGGCTATGGTGGTACCACCTCAAAATCCGATCTGGAGTCACTTAACGCAAGCTATGGGGCGACAAGTGCGTATAACAATGCTGCTTGGTCCAACGGATTGAACAACTACCAGTATGGTAGCTGTTCAGCGACTACAGCTCAGTATAGTGGAGCCACTGGCCATGGAGCagcgccaccaccaccagtaGTACTTTATCCACAGCTCTACTCAACTGtcaaccaaaaccaaatccaCCTTCACCTACACAGCAGCGAGAAGCTGGAACAGTACCTGGCTACAGACCAACAGCTTACTATCAGCTCAATAACCGGCAATCGTTCTAGCATTGAGATTGGATTAGGAGCCAGTGGTAATGGTAGCGGTGGTGTCGTACAGGAGGACCAGGATCAACATGCTGCCGTTTCCATTGCAGAACAGGCTGCAGAAGGGACCGCACAAAACTATCActtacatcatcatcatcaccatcaccacgAGACACAGCGGCATATGGAggcacaacagcagccgcaacagcatcAGAACGACGGCAACAGTGATGCTGCCCGCGAAGACGACGTTAGCGACCTAACGCAAGTTTGGCGTCCATATTGA
- Protein Sequence
- MVTSSASPTGTGWSAPAEYKSATSAVAATTTAAAGVMCEVLPSSTTSIGSSSPTGGASNGTVNSAHSGSNKNTSLSINNNNINNSNTNTNNNNNNNNNNNSNNNNNSNNNNSTNNNNAVHQDLIWMERFVLERQQEYPGELVRTSNPYFLCSALPSHWRSNKTLPLAFKVVALADVGDGTYVTIRAGNDENCCAELRNYTAQMKNGVAKFNDLRFVGRSGRGKSFTLTITVATSPPQVATYAKAIKVTVDGPREPRSKTSSPGNPQYTALRLGQRPFIDGFPKTFHELETLRRSAKVAAATTAAAAAASVAASVTSTDGSLTTSVSISQQLGSNYSSSNSTINSDCYKPNAPQIQETELIGAAEWTGSANCGANVAYSVGMAVPYHHAHHTHAHSHSHSHNHATHHHHAHHLQHQVPLPPPPPPPAAAPVPVPNTTAMNHYGSAMGSYETTSLDAGNYHISTVLPDMHGFSTDPYQTAAAGGYGGTTSKSDLESLNASYGATSAYNNAAWSNGLNNYQYGSCSATTAQYSGATGHGAAPPPPVVLYPQLYSTVNQNQIHLHLHSSEKLEQYLATDQQLTISSITGNRSSIEIGLGASGNGSGGVVQEDQDQHAAVSIAEQAAEGTAQNYHLHHHHHHHHETQRHMEAQQQPQQHQNDGNSDAAREDDVSDLTQVWRPY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -