Basic Information

Gene Symbol
zfh2
Assembly
GCA_018901815.1
Location
JAEIFI010000614.1:1-19752[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.00013 0.0089 16.3 1.4 2 23 26 48 25 48 0.96
2 10 3.2e-05 0.0022 18.2 0.7 1 23 80 104 80 104 0.92
3 10 0.0055 0.38 11.1 0.3 1 22 205 226 205 229 0.91
4 10 1.2 87 3.7 1.9 1 23 445 469 445 469 0.91
5 10 2.8 2e+02 2.6 0.2 2 23 718 740 717 740 0.93
6 10 0.29 20 5.7 1.2 2 21 913 932 913 936 0.89
7 10 6e-05 0.0042 17.3 2.3 1 23 987 1009 987 1009 0.98
8 10 0.0012 0.085 13.2 2.0 2 23 1016 1038 1015 1038 0.94
9 10 0.00031 0.021 15.1 1.7 1 23 1647 1669 1647 1669 0.97
10 10 0.0014 0.1 13.0 0.5 1 23 1789 1811 1789 1811 0.97

Sequence Information

Coding Sequence
TGCGAATTGCTATTGAGTTCGGCACGGCTTAACAGTGGCGTGCAGATGTCCACACGCAACTCATGTAAGACCCTCAAATGTCCGCAGTGCAATTGGCATTATAAATACCAGGAGACGTTAGAGATTCATATGCGCGAGAAACATCCGGACGGAGAAAGTGCTTGTGGTTATTGCTTGGCAGGCCAACAGCATCCTCGACTGGCACGCGGAGAGTCATATTCTTGTGGCTACAAGCCGTATCGCTGCGAAATATGCAATTATTCGACAACGACAAAGGGCAATCTTTCCATACACATGCAGTCGGATAAGCATTTAAATAATATGCAGGAGTTAAACAGCTCGCAGAACATGGTTGCCGCTGCGGCAGCGGCTGCGGGCGCAAAGCTTCTTCTTTCCAGTCCATCGCCGCAAGGAGCTGGATCTGGCCAGGTTGTGGGAGTGGGATCTCAGCAAATGCAACAACCTCCACTGGTGGTGGCCTCCAGTGCGGGCAGCAATGCCTGCAGCACCACTGCCAGTGTAGTTGCTTCATCAGTAGCGGTAACTGGATCATCGGGACAGGGAACGGTAACGGGAACAGCTACGGCAGCTTCTCTCAAAGTAAAGCCCTCGTTCCGTTGCGAAATCTGTAGTTACGAAACGTCAGTGGCGCGCAATCTGCGCATACATATGACAAGTGAAAAGCATACACACAACATGGCTGTGCTGCAGAACAACATAAAGCACATACAGGCATTTAACTTCCTACAGCAGCAGCATCAGCAACAAAGCGCTGCAACGAGTGTCAGTGGTAGCAACAATAGTTTCTTACCAGTCTCTGAGGTTGCATTGGCCGACATGGCGTATAACCAAGCCCTGATGATCCAACTACTGCAGCAGAACTCTTCCACCAACCAGCAACATCATCAACAGCATCAACATCAACAACACCAACAGCATCAACAACACCAACAGCATCAACATCATCAGCTTCAGCATCAACTTAAGCTGTCACCACACGCCACAACGTCCCCATCGCCGGTTAGCACGCCCGACCAACTGCAGGCACCAGCGTACACCTTCTCGCCAAAGTCATTGAAACTGTCGCAAGGTATTGGCATGACTCTGGGCATGCTAACGCATGCCAACGAATCGGGGCCAACTAGTGCCGATGGACTGGAGTCCCTGCCAGCCAGCTCGCCAGAGTTGTGGCCGACAGCGCTATTTAGTTGCCTCATCTGTGAGTGCTTCAGCACCAACAATATTGAAGAACTCAACCAGCATCTGGTGTTGGATCGCTCTCGCCAAGCATCTAGCGCCTCCTCAGACATAATGGTCATACACAACAACAACTATATATGCCGGCTATGCAACTACAAGACAAATCTGAAGGCGAACTTTCAGTTGCACAGCAAGACGGACAAACATTTGCAGAAACTGAATTTCATCAATCACATACGAGAGGGTGGCGCTCGCAACGAGTATAAGCTGCAGAATCAATTGCAGTTGGCATCAAATATGGTTCAGTTGAAGTGCAATTGCTGCGACTTTCATACCAACTCCATACAGAAGCTCGCGCTGCACACACAGCAGATGCGGCATGACACCATGCGTATGATCTTTCAGCACTTGCTCTTTATAAGCCAGCAGAATCAGCTACGCAAAAGCTTAAGCTACGCTTCCGAAGGCGATGCGACGTTAGGCCCGGCGGATTGTCATGGCCAGCAAAAGGCTTTGTGTTGCCAGCTATGCAATTTCGTGGCTAAGCACCTACACGAAATGGTAGTGCATGTGAAGGGACTGAGGCACATGCAAGTAGAGCAGTTCATATGTCTACAGCGACGCAGCGAAAATCTCGACATGCTTCCACTAGGAGAAGTCTTCAAGGTCACCGAAAAGCTGCCCCCAACCAGCAGCACTACAGAAGAAGCAGTTTCGGACGATGGCATTAATGTTGGCACAACGTCAGTGGGTGCAAACGCGGATAATGTTTACGGCGTGCCAATTGCGTCGTCGTCGTCAGCAGCAGCAGCAGATGGCAACATACTGTCGCCGCATTCAGTCTCGAGCTGTTCAACACCTTGTGACAAGACTCAGCTGCTACGTGCAATATCGCCAGTGTCAAATTTCAGTGACTTAGGCCTTGGCGGTGCGTTGCCAACAACACTTCTAAAGTGCAATCTCTGCGACTACTTTGGGCAATCGAAGAAAGATATTGCACTGCACATTGAGTCGTTGCATCCGGGCATTGAGTGCGATGACTACATCAGTATTCCCACCAATGCAGCTGCCTTGCAAGCTTTCCAAACAGCTGTTGCCGCCGCCGCGCTGGCAGCCGTGCAACGATGTAACGTCGCTAGTGAATTGTCGATGTCTGCAACAGAAGCAAACACTAACACCGATGCTAATGTGTACGGTCAAGGCCAAGGGGAGGGCGATGTGGAATGTCCGATTGATATAAAGCGCGAACGACTTGTGGCAGATGATGGGGATGGGGATCTGGGGACTAACACACTCTCTCCAAAATCCGAATCGCAAGCACGTTCATCAAGTGTCTCCTGCCCTTTCGTAACCCGCGATGGTTTGGCGAGACTGCTGCAGCTGGTGGATCATACAGTCTGGCGATCGCCAAGCACCACATCCCAGCAGTCAACAAAGTCTGTTCCTCCTGAAGGCGGCTCTAGCAGTAAAGGTAGTGCCGACGACTATATGTCTATGGCAGGCATTAAGGCTGTCGGCTCTGCTCTGCCAGGTGCTTCGTGTCAGCAGTGCGAAGCGAACTTCAAGCACGAGGAACAACTGCTTCAGCATGCCCAGCAGACTCAGCACTTTCCCATGCAGAACGGCGAATACCTTTGCCTTGCGCTCAAGCACGCCAGTGCTCCTTGTTTTCTAGTATTCGCAACGCTGCCGGCCATGATTGCGCATTTCAAAGATGTCCATATGAGCCTGGTGATCTCGGAGCGACATGTGTATAAGTATCGATGCAAGCAGTGCTCACTGGCGTTTAAGACACAGGAGAAGCTCACCACACACATGCTGTACCACTCCATGCGGGACGCTACCAAATGCTCACTCTGCCAGCGCAACTTTCGCAGCACACAGGCCCTGCAGAAGCACATGGAGCAGACACACACTGCTGAGAGGGCCGCTACGGCCAGCCCGGGCGATCATTCATCACCTAGTCCCAAGTCGAATGAAATGGATAAACTATCGAATACGTTCAACTACACAGCAGCAAACAAGGCAGCCACTGAAGCGGCTACTCTGGCCTTGCGTTCGTCTCCCCAGCAAGACACAGAGGCGAAGGAGGTCCTTGAAAACTCAACCCACTTGTTGTCGCCCAACGAATCTCCGTCAGACCCTCACCAGCAGTTTGCTGTGTTGACTGCGGCACTGCTGAAGCAGCAACAGCAAAAGCAACAGGACACAGTTGCCATGGAGACGGACGGCCAGTTACAGCTTCTTTCATCTGACGAGCAGGCGGAGCAGCAGCAAGTTTCGTTCGGCAGCTTAAATGCACAGTCGGTGCAGGGGTTACATAATCTGCAGAACTTGCACCAGATGCAGCAGCAGCTGAGCGCAGCAGCAGCCACAACTGGAATGCCAATCAACCCAGTGGACATGCTCAATTTAATGCAATTCCATCATTTGATGTCGCTTAACTTTATGAATCTGGCACCTCCATTAATTTTCGGTGCTACTGGTGCCAATGATGCCAATTCAGTGGGTGCAGGGGGCTCAGTAGGAGGAGGAGGTGTTCCTGCTGGTTCCTCGTCTGGCACAACTACTACTTGCCTAGCAGATCTACAACAAGTTTGTTCTGGCGAAGCTTCCAACATCAAAATCATGCCACAGTCAAGTGCCAGTAATAACAGTCAGCAACAACAGCAACAACACTGCAGCAACCAAAAACGTGCTCGAACCCGCATCACAGACGATCAGCTAAAAATCTTGCGTGCACACTTTGACATTAATAACTCGCCGAGTGAAGAGAGCATTATGGAGATGTCACACAAGGCCAATCTGCCAATGAAAGTTGTCAAGCATTGGTTTCGCAACACGCTGTTCAAGGAGCGACAGCGCAATAAGGACTCGCCATATAACTTCAACAACCCACCATCGACAACACTTAATCTGGAGGAATACGAGCGGACTGGTCAAGCCAAGTCCGACATGGTGCCATGTGGCTCCAAGTCGGGCCAGGAAGATATTGATAGTTTACCTCTGCCACTGGAGCAACAAGGCGAGGCCGCTCAGCATCATCAGACAAGCCTACATAATCCCACCGATAATGAGCAATCTTTGCTTTCATCTGGATCAGGATCATCCCTACAACATTATCAGCTGCAGCAACATCATTTGCAACAACAGCAACAGATTAATTGCTTTGAAACGAAGTCAGAGAGCGAAAGCTCTGACGTACTCTCCCGTCCGCCAAGCCCCTCAAATCTGTATGCCAGCATGAACGATCTGTTAAGCCAGCAGCTGGAGAATATGGGCAGCAACATGGGGCCGCCAAAAAAGTTACAAATCGCTGGCAAATCCATAGAGAAACTGCAGTCGGGCCAGTCCAGTTCGAGTTCAGGATCCTCTGGTTTGAGTGGTTTAGTAGCATCAGCATCAGGCTCAGCAACAGCAACAGGATCAACAGCTTGTGTCCAGCTGGAGAGTAACTCTTCCAATTCATCAAACTCATCCTCATCGACATCAGGCGGCAAGCGAGCTAATCGCACGCGATTCACTGATTATCAAATCAAAGTATTGCAAGAATTCTTTGAGAACAATTCTTATCCAAAGGACAGTGATTTGGAATACCTAAGCAAGCTGCTGCTGCTATCGCCACGCGTGATTGTCGTTTGGTTTCAAAACGCACGCCAAAAGCAGCGTAAGATCTACGAGAATCAACCAAACAATACGCTATACGAGAATGAGGAGTCCAAGAAGCAAAACATTAACTACGCCTGCAAGAAGTGTAGCCTAGTCTTTCAACGATACTACGAGCTCATTCGCCACCAGAAGAATCATTGCTTCAAAGAGGAGAACAACAAGAAGTCTGCCAAGGCGCAGATAGCCGCAGCACAAATAGCTCAGAACCTTAGTTCGGAGGACTCGAATTCATCTATGGACATACACCACCATGCTGTCTCAGCAGGTTCAGCCTCAGGTTTGGCTACAGCCTCAGGTTTAGTAGGTGCCGTGGGTGTGGCTGCAGCCTCGGCAGCAGCATCAGTGCTGACAGGGCCACAAGTTCAGTTCAGCTCGTCGCCACAGCATCATCTGTTCAGTAAATCATCATCGCTAACTGATTTCAGTCCCTCAACAACGCCCACGCCTCCTCAACGCGAGCGCAGCAATAGTCTTGATCAGCAACGCTTGTCAAAGTTCGATTGCGATAAATGCGAGTTGCAGTTCAACAGCCTTGAATCCTTGCGAGAGCATCAATTGATGCATCTCATGAATCCAACACTATTCAGCGCCAGCCAGTCCGAGGCAGCAACCTACGGCCCCTTTGGTAGCATATTGCAAAGTCTACAGCAAGCAGCCCAACAACAACAGCAGCAACAACAGCAGCAGCAGCAAAAACAGCAACTATCGCAACCGCAGCCGCCGCCAGCAAAGAAGAGAAAATATTCAGAGAGCTCGTCGAACGCTGAGGAAAGTCTTTCGATGGGTGAATTTGAAAGAAGTAATAAAGATGCACAAAAGAAATATGAATATCTCTATCAATACTTCATGCAACACGAAATGAATGCTGAATTGAAGCAACAGTTTGCGTTGCAACAACAGCAACAGCAACAGCAAGCTAATGCGGAGACGACGGACTTCGAGATGGATTTCCTTAGTAACTTCTATCAACAGAATGAACTGAAGAAGGTCGGTAATTATGACTTTCTGCTCCAATATTATCGTAAGCGCAACGAGGACCCTTCAATGTCGATGCCAACGTCGTTTAGCTCCAGCAAGAAGCCATCAATTGAATTTCTTATACAATATTATCAACTGAATGAGTCGAAAAAGTTTTTTCACTTAGTTGCCTCGCCCCAAACAACACCTGATCGCCCAGGATCACAGCCGTCGTCGCAGAAGCCGATCGCGACGGCGGATGAAAACTTTATCGGCCATCGTCAGGAGGAGAACGAGCAACAACAAGACCATCGCGAGATCATGGATATCAAAATGAAACAGGATGATCGCTACAACGGCATACCGAACGATCGCGATTTTAATTTGAATAAGAAACTTAATAACAACCACATCAATGCGAACCAAGAGGATCCAAGCAGCAACGATCAAGTGATGGACATAATCAAGAAGTCAAATGATAATGAGACTGTGCTAACAGGACACAGATCGGTGTCATTTGATAATATTATGAATGGAGATAAGCACAGCTTGATACAGCAGGGCAAAGATGAACTGCACAAGTTGAGGGACGCAGACAAGTCGCAATATTTTCAAAACCTAGAGGACTTCCTCGATGCCACAATGATCGAAAACAATTCACAAATGCTGACATTCACAGACGATGCCAATCCTAGTCCCAAGATTGAGAATGTGCCAGCAGCCACTGAAGTAGTTGGTAGAAAGAATGAGACCTTGCCCATAGATTCTTCTGCTTCGACACCAACAAGTGCTCCTCCGTCTAAACAAAACAAGCGACTGCGAACCACCATACTACCAGAGCAGTTAAATTTCCTATACGAGTGCTACCAAACTGAATCCAATCCAAGTCGCAAAATGCTGGAGGAAATTTCCAAAAAAGTCAATCTCAAAAAACGCGTTGTCCAAGTTTGGTTTCAGAACTCACGCGCCAAAGATAAGAAATCGCGCAATCAACGACAGTACGCACACATATCGGACGATAACAATAGCTACGACGGCTCCTGCAGCAAAGAGATCAGCAATAGTAACAGTCTTAAGAGCAGGGCTCTCACTCTAGAGTCTGTGCTGAGCTCTGCAGGCGGCTCTCTTGTTGAACCCGAAGCGGAGCACGAATCGGAAGCCGAATCTAAAACGGATGAGCAGCTGCAAGAATGTCAATTATGTCAGATATCGCAGGTGAACATGCAGAAGCATTTGTTTACTGTGGAGCACATTTGCAAGGTGAAAGAACTGCTGGAGCAGACCAGCGAGCAGCTCTACACCAATAGCAATGCCAGCGGTAGCGATAATGACAATGATTCCGATCGAGAGAGACGATTCTACAGTCTCTCCAAGGCCTTTCTACTACAGCAAGTTGCCTCGAATGTTGCAAGCAGCATTATGGTACCCAAGCGACCAATGAGTCCGATAAATAGCGGCGACACTACTAGGGAGGCCACTACTGGACATGACCGCGCCGGATTGGCCAATGTTATGGGCGGTATGGCAGTGGGGGGAGCTATACACCATAGCCAGTTGGCAACCGGCGATATTGATATGTTATCTGTTAAAGACGACGACGACGACGACGATGGTGAGGAAGAAGAGATTGTTGAGGTGGTCAAGAAGAATTCAACTGGCAACCGGCAACCACTGATGCAGCAGTTATACAACCGTAATCACATCACTGGTAAGATTTGCGAAATATCTTCTCCATGA
Protein Sequence
CELLLSSARLNSGVQMSTRNSCKTLKCPQCNWHYKYQETLEIHMREKHPDGESACGYCLAGQQHPRLARGESYSCGYKPYRCEICNYSTTTKGNLSIHMQSDKHLNNMQELNSSQNMVAAAAAAAGAKLLLSSPSPQGAGSGQVVGVGSQQMQQPPLVVASSAGSNACSTTASVVASSVAVTGSSGQGTVTGTATAASLKVKPSFRCEICSYETSVARNLRIHMTSEKHTHNMAVLQNNIKHIQAFNFLQQQHQQQSAATSVSGSNNSFLPVSEVALADMAYNQALMIQLLQQNSSTNQQHHQQHQHQQHQQHQQHQQHQHHQLQHQLKLSPHATTSPSPVSTPDQLQAPAYTFSPKSLKLSQGIGMTLGMLTHANESGPTSADGLESLPASSPELWPTALFSCLICECFSTNNIEELNQHLVLDRSRQASSASSDIMVIHNNNYICRLCNYKTNLKANFQLHSKTDKHLQKLNFINHIREGGARNEYKLQNQLQLASNMVQLKCNCCDFHTNSIQKLALHTQQMRHDTMRMIFQHLLFISQQNQLRKSLSYASEGDATLGPADCHGQQKALCCQLCNFVAKHLHEMVVHVKGLRHMQVEQFICLQRRSENLDMLPLGEVFKVTEKLPPTSSTTEEAVSDDGINVGTTSVGANADNVYGVPIASSSSAAAADGNILSPHSVSSCSTPCDKTQLLRAISPVSNFSDLGLGGALPTTLLKCNLCDYFGQSKKDIALHIESLHPGIECDDYISIPTNAAALQAFQTAVAAAALAAVQRCNVASELSMSATEANTNTDANVYGQGQGEGDVECPIDIKRERLVADDGDGDLGTNTLSPKSESQARSSSVSCPFVTRDGLARLLQLVDHTVWRSPSTTSQQSTKSVPPEGGSSSKGSADDYMSMAGIKAVGSALPGASCQQCEANFKHEEQLLQHAQQTQHFPMQNGEYLCLALKHASAPCFLVFATLPAMIAHFKDVHMSLVISERHVYKYRCKQCSLAFKTQEKLTTHMLYHSMRDATKCSLCQRNFRSTQALQKHMEQTHTAERAATASPGDHSSPSPKSNEMDKLSNTFNYTAANKAATEAATLALRSSPQQDTEAKEVLENSTHLLSPNESPSDPHQQFAVLTAALLKQQQQKQQDTVAMETDGQLQLLSSDEQAEQQQVSFGSLNAQSVQGLHNLQNLHQMQQQLSAAAATTGMPINPVDMLNLMQFHHLMSLNFMNLAPPLIFGATGANDANSVGAGGSVGGGGVPAGSSSGTTTTCLADLQQVCSGEASNIKIMPQSSASNNSQQQQQQHCSNQKRARTRITDDQLKILRAHFDINNSPSEESIMEMSHKANLPMKVVKHWFRNTLFKERQRNKDSPYNFNNPPSTTLNLEEYERTGQAKSDMVPCGSKSGQEDIDSLPLPLEQQGEAAQHHQTSLHNPTDNEQSLLSSGSGSSLQHYQLQQHHLQQQQQINCFETKSESESSDVLSRPPSPSNLYASMNDLLSQQLENMGSNMGPPKKLQIAGKSIEKLQSGQSSSSSGSSGLSGLVASASGSATATGSTACVQLESNSSNSSNSSSSTSGGKRANRTRFTDYQIKVLQEFFENNSYPKDSDLEYLSKLLLLSPRVIVVWFQNARQKQRKIYENQPNNTLYENEESKKQNINYACKKCSLVFQRYYELIRHQKNHCFKEENNKKSAKAQIAAAQIAQNLSSEDSNSSMDIHHHAVSAGSASGLATASGLVGAVGVAAASAAASVLTGPQVQFSSSPQHHLFSKSSSLTDFSPSTTPTPPQRERSNSLDQQRLSKFDCDKCELQFNSLESLREHQLMHLMNPTLFSASQSEAATYGPFGSILQSLQQAAQQQQQQQQQQQQKQQLSQPQPPPAKKRKYSESSSNAEESLSMGEFERSNKDAQKKYEYLYQYFMQHEMNAELKQQFALQQQQQQQQANAETTDFEMDFLSNFYQQNELKKVGNYDFLLQYYRKRNEDPSMSMPTSFSSSKKPSIEFLIQYYQLNESKKFFHLVASPQTTPDRPGSQPSSQKPIATADENFIGHRQEENEQQQDHREIMDIKMKQDDRYNGIPNDRDFNLNKKLNNNHINANQEDPSSNDQVMDIIKKSNDNETVLTGHRSVSFDNIMNGDKHSLIQQGKDELHKLRDADKSQYFQNLEDFLDATMIENNSQMLTFTDDANPSPKIENVPAATEVVGRKNETLPIDSSASTPTSAPPSKQNKRLRTTILPEQLNFLYECYQTESNPSRKMLEEISKKVNLKKRVVQVWFQNSRAKDKKSRNQRQYAHISDDNNSYDGSCSKEISNSNSLKSRALTLESVLSSAGGSLVEPEAEHESEAESKTDEQLQECQLCQISQVNMQKHLFTVEHICKVKELLEQTSEQLYTNSNASGSDNDNDSDRERRFYSLSKAFLLQQVASNVASSIMVPKRPMSPINSGDTTREATTGHDRAGLANVMGGMAVGGAIHHSQLATGDIDMLSVKDDDDDDDGEEEEIVEVVKKNSTGNRQPLMQQLYNRNHITGKICEISSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01555256; iTF_01550097;
90% Identity
iTF_01555256;
80% Identity
iTF_01555256;