Zlac009834.1
Basic Information
- Insect
- Zaprionus lachaisei
- Gene Symbol
- L
- Assembly
- GCA_018901815.1
- Location
- JAEIFI010000054.1:977897-987168[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 8.9e-06 0.00062 19.9 2.9 1 23 143 165 143 165 0.98 2 17 0.31 21 5.6 6.2 1 23 171 193 171 193 0.97 3 17 1.5e-07 1e-05 25.5 3.2 1 23 199 221 199 221 0.99 4 17 1.1e-05 0.00076 19.7 0.4 1 23 227 249 227 249 0.99 5 17 0.061 4.3 7.8 0.1 2 23 335 359 334 359 0.91 6 17 0.0049 0.34 11.3 1.1 2 23 386 408 385 408 0.95 7 17 0.054 3.8 8.0 0.7 1 23 500 522 500 522 0.97 8 17 0.003 0.21 11.9 0.1 2 23 530 551 529 551 0.92 9 17 0.00063 0.044 14.1 0.1 1 23 559 584 559 584 0.92 10 17 4.5 3.1e+02 2.0 1.6 2 23 620 642 619 642 0.95 11 17 0.0022 0.15 12.4 1.1 1 23 694 717 694 717 0.97 12 17 0.0014 0.099 13.0 1.8 2 23 840 862 839 862 0.96 13 17 0.1 7 7.2 0.1 1 23 868 890 868 890 0.92 14 17 0.7 49 4.5 1.8 2 23 898 919 897 919 0.96 15 17 0.65 45 4.6 0.5 2 23 1027 1048 1027 1048 0.94 16 17 0.031 2.2 8.8 0.0 1 23 1058 1080 1058 1080 0.96 17 17 0.00019 0.013 15.7 1.2 1 23 1085 1107 1085 1107 0.97
Sequence Information
- Coding Sequence
- ATGATGGCTCTAAAGATGTTGTATCGCGGTCCCAGTTCGCGTTTGGAGAATTTAATCGAAAAGATTCAGGCAACGAAGGAGATTACGAACAACGACATGTACAGCACGCACACCTCCAGCAGCAGCAGCAGACACAAGATGCTGCCATGGAGGAGTCCAAGGCGAATGGCGACACGGCAGACAGGGAGGCCAGCAAGATGGGGGAAGCGACCCGGCCACACCATGCATCATCATCATCATCATTATCATCATCAGCAGGCGCTGAAAATTGCCAACAAGTTGCGCAAAATCAATAAGGAGGCGAAGCAAGCAGGCGTGGCAGGAGCTGGCACACCCGCAGCTGCTGCAGGCGGAGGCGGAGGCGGAGCTGGCCACAAGTTTGATAAGTTGACAGGCGAAGGCATTAAGAGTCGAGGCGACGGCTCCTATCAGTGTCAGTTCTGTGATAAGTCATTTCCGCGCCTCGGTTACTTGAAGCATCACGTTCAGAGCCACGCCGAGCACTTGCCCTTCAAGTGCGAGTACTGCGCCAAGCTCTTCAAGCACAAACGCTCCAGGGATCGCCATAAGAAGCTGCACACCAACGAGAGGAACTACAAGTGCCCACACTGTGAGGCTGCTTTCTCCAGAAGCGATCACTTGAAGATCCACATGAAGACGCACGACATCCAGAAGCCCTTCCAGTGCAGCATGTGCAATCGGGGCTATAACACCGCCGCCGCCCTCACATCGCACATGCAGAAGCATAAGAAGAACGCGGCCATACTGGCAGCAGGTGGCAACCCTAATGCACTCAACTACAGTCCCCGATCGACTGGCTCCGCCTCGATCTCCTCCAACGGCAGCCTGCACAAGCGACGCTATGCGCTGGCCCTCGCTGGCTCCGACAGCAGCCCGAGTCGCCTGGAGTTCCCCCCCAAGCGGGCACGTGGCGCCAGCTCAGCTGTGCCCAGCACGCCCACGCCCACACCCACGCCCACACCGCATGCAGTGCAACTGCTGCGCTGCAGCTACTGCCCCAAGGCGACGGAGTTTGCCAGCCTGGAGCAGCTGAATGCGCATCTGCAGTTGGCGCACGAGTCACAGCAGCAGCAGGCGAGGAATGGCGCAGGGGAGTCAGGGAATGGAGCAGAGCAGAGCAAGGGGTTTCAGCTGAGCTGCGAGTACTGCACCATGAGGTTCCACAACATTGCCGGCCTGTTCCAGCACATGCGGGCCACGCACTTGGATCGCCTGAGCAGCCCCAACTCGTACTACGAGCACCTCAATCGACTGGCCACGGCGGGCACCTTCAGTCCGCGACTGGCCATGGAGCTGCCCAAGCTCAAGCAGGATTTGGCCAGTCCGCAGCGAACGGAGCAGCAGCAGGATGTGCCCACCGATCTGAGCAGCAACAAGCGACGCACATTGACACCACCAGCAGCAGGAGTAGGAGTAGGAGTTGGAGTAGGTGGAGCTGCCTTGCCACAGCCTCCACCACCCGCACCACCGGGCATCTTCTTCTGCAATCAGTGCAACGCTGGCCTGCCCGACTTCGAGAGCTTCCGGAATCATCTGAAGAGTCACATTGCCGAGGGCATGCAGCTGGTCTGCCCGCACTGCGGGCTCAGCCTGCCCGAGCAGAGCGAGTTCGAGCGGCATGTGGTGGCGCACTTTCTCATTGCGGGCAGCGAGTTCAACTGCAGCGTGGCCAGCTGCGGCAAGGCCTTTGCCAAGGCCGAGGAACTGCAGCAGCATCTGAATCAGGAGCACGTGCACACGCTGCTCAAGTGCGGCATCTGTGCGGAGCTCTGTGAGAATCGCATGGCCATGCAGCTCCATCTGGCCTGCTCCCACTCGCAGGAGACGAAGCTGCTGCGCTGCAGCGCCTGCCTGGAGCTCTTTCGCAACGACACCGACTTCCATGTGCATGTCAAGACCAGGCACCAGTTGGCCAGCAGTGCCAGCGTTGCCAGCGTTCCCAGTGCTGCCTCTGGTGCAGCCACGCCCACTGGCAACACATTGCAGTGCATGTTCTGTCGCGCCGTCTGTGCCTCCGAGCTGGAGATGCACTTCCATCTGGCGGCGCATGCACGTCAATTCCGCTGTCCCTCCTGCCCGGAGACGTTCCACGTGGAGTTCCTGCTGGATCGCCACATGCAGAGCCAGCACGGGCAGGAGCAGAAGGAGCCAGCAAGCAGCGCCGGCTCACCCAGCATGGGCAGTCTCTATGTGGACACCAGCGGATTGAAGGGACAGCAGACACCGCATCCCGCGCTGATGTACGGCCTCAGTCAGCGCTACCTTATGGAGATGTACGCAGCCAAGGCCACCTCGCCAGCAGCGGCAGCAGCAGCTGCTGTGGCTCCAACCGCCGAGCTGCCAGCGCCGCCAGCCTCAGCTGGAGTTGCAGTTGCAGTTGGAAATGGAGGAGCTCAGCTGAGCTGCGGCATGTGCGAGCGTCAGGATCTGCGCAGCGAGGCGGAGCTGCACTCGCACCGCAAGCTGGCGCACAATCTCAAGACTGGCGTCAGTCTGCGCTGTGCCTACTGCTCCGGCAACTTCAAGTCCCGTGCGGAGCTGGAGCAGCACATGAAGAGCTGCCACAACTCGAGTGGCAAGCACAAGTGTCTCATCTGCGACGAGATCTTTCCCTCTCCCGCCATACTGGCCGAGCACAAGCTGCAGCACTCCAAGGTGGGTCAGTCGGGCAAGTGTGCCCACTGTGGCCTCCAGCTGGAGCACGTGGCCGCCTTCCGTGCGCATCTCTGCGAGCATGGCGGCGACGGCAGTCTGCCCCTGGCCTGCATCTGCTGCCGCCAGACACTGCACTCGGAGTTCGAGCTGAGCCTGCACGCCAAGTTCCACACGAAGTCACCCAGCGGGGGAGGCTGCCTCCAGGAGCCAGTCTGTGCCCTCTGCCTGGAGCCACTGCCAGGTGCGGCGGGTGAGACGGCCAAGCTGTGCGAGAAATGCTGTCGCAAGCACAATCTCAACGGCAAGAGGAGTAAGGAGGCAGCAGCTCCGCCTCAGCCTCAGCCTCCGCCTCCCTCTGCCATCGCCATCAATGCCAGCTCGCAGTCAAGTTATCTGGAGAATCGTTGCAATCTCTGCAAGATGATTTTGCCACATGCACAGAAGCTGCAGGAGCACCTTGTGGAGCACACGTTCGCCGGCACCGAGCAGCGCGGCTTCAACTGCTACATCTGCTCGGCCGTCTTCACCGCCCCCGCCGGCCTGCTCAGCCACATAGCCGAGCACGGTGCTCGGCCCTACGACTGCAATCTGTGCCCGGAGAAGTTCTACTTCCGTGCCGAGCTGGAGCATCATCAGCGTGCCCACGAGCTGCGACCTGCTGCCACAGGTCCCGTTCGCCTGGCCAAGCAGGAGCAGCTCAGTTCCCCCCTGGCACTCAGTCCCAGTCATGTCAAGCAGGAGCTCTACGAATCAGAGACGGCGCCTGCTTCCCCGCCTGCACTGGAGCAAGAGAGGGAGCGGGAGCGGGAGCGGGAGCGGGAGCACGAGTCTGCCCAGCAAGGAGCCGAGGAGGAGGAGTACATTGAGGTGGAGCAGATGCCGCACGAGACACGCTCCAGCGATCTACACCCCTCCAGCCACACTGAGCGCTCCAGCAGCAGCGCCTGA
- Protein Sequence
- MMALKMLYRGPSSRLENLIEKIQATKEITNNDMYSTHTSSSSSRHKMLPWRSPRRMATRQTGRPARWGKRPGHTMHHHHHHYHHQQALKIANKLRKINKEAKQAGVAGAGTPAAAAGGGGGGAGHKFDKLTGEGIKSRGDGSYQCQFCDKSFPRLGYLKHHVQSHAEHLPFKCEYCAKLFKHKRSRDRHKKLHTNERNYKCPHCEAAFSRSDHLKIHMKTHDIQKPFQCSMCNRGYNTAAALTSHMQKHKKNAAILAAGGNPNALNYSPRSTGSASISSNGSLHKRRYALALAGSDSSPSRLEFPPKRARGASSAVPSTPTPTPTPTPHAVQLLRCSYCPKATEFASLEQLNAHLQLAHESQQQQARNGAGESGNGAEQSKGFQLSCEYCTMRFHNIAGLFQHMRATHLDRLSSPNSYYEHLNRLATAGTFSPRLAMELPKLKQDLASPQRTEQQQDVPTDLSSNKRRTLTPPAAGVGVGVGVGGAALPQPPPPAPPGIFFCNQCNAGLPDFESFRNHLKSHIAEGMQLVCPHCGLSLPEQSEFERHVVAHFLIAGSEFNCSVASCGKAFAKAEELQQHLNQEHVHTLLKCGICAELCENRMAMQLHLACSHSQETKLLRCSACLELFRNDTDFHVHVKTRHQLASSASVASVPSAASGAATPTGNTLQCMFCRAVCASELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSQHGQEQKEPASSAGSPSMGSLYVDTSGLKGQQTPHPALMYGLSQRYLMEMYAAKATSPAAAAAAAVAPTAELPAPPASAGVAVAVGNGGAQLSCGMCERQDLRSEAELHSHRKLAHNLKTGVSLRCAYCSGNFKSRAELEQHMKSCHNSSGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCAHCGLQLEHVAAFRAHLCEHGGDGSLPLACICCRQTLHSEFELSLHAKFHTKSPSGGGCLQEPVCALCLEPLPGAAGETAKLCEKCCRKHNLNGKRSKEAAAPPQPQPPPPSAIAINASSQSSYLENRCNLCKMILPHAQKLQEHLVEHTFAGTEQRGFNCYICSAVFTAPAGLLSHIAEHGARPYDCNLCPEKFYFRAELEHHQRAHELRPAATGPVRLAKQEQLSSPLALSPSHVKQELYESETAPASPPALEQEREREREREREHESAQQGAEEEEYIEVEQMPHETRSSDLHPSSHTERSSSSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -