Basic Information

Insect: Zaprionus lachaisei
Gene Symbol: -
Assembly: GCA_018901815.1
Location: JAEIFI010000549.1:5936299-5940894[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 24 0.039 2.7 8.4 0.7 1 23 214 236 214 236 0.91

2 24 0.0018 0.13 12.6 1.9 1 23 242 264 242 264 0.98

3 24 0.03 2.1 8.8 1.9 1 23 390 413 390 413 0.91

4 24 1.3 87 3.7 0.9 2 21 424 443 423 444 0.92

5 24 2.7 1.9e+02 2.7 5.2 1 23 488 510 488 510 0.97

6 24 0.00017 0.012 15.9 1.6 1 23 589 612 589 612 0.93

7 24 0.068 4.8 7.7 0.1 1 22 620 641 620 641 0.95

8 24 1 72 4.0 5.2 1 23 650 673 650 673 0.96

9 24 0.00013 0.0094 16.2 0.1 2 23 703 724 702 724 0.97

10 24 1.3e-05 0.0009 19.4 1.2 1 23 730 752 730 752 0.98

11 24 0.017 1.2 9.6 1.1 1 23 895 918 895 918 0.94

12 24 0.05 3.5 8.1 2.1 1 21 925 945 925 946 0.94

13 24 0.13 9.3 6.8 0.3 1 23 955 978 955 978 0.90

14 24 6.4e-05 0.0044 17.2 4.6 1 23 1004 1026 1004 1026 0.97

15 24 0.16 11 6.5 3.1 1 23 1033 1055 1033 1055 0.97

16 24 0.021 1.5 9.3 0.0 2 21 1082 1101 1081 1102 0.93

17 24 0.031 2.1 8.8 3.8 1 23 1147 1170 1147 1170 0.96

18 24 0.0011 0.074 13.4 0.9 1 23 1207 1230 1207 1230 0.98

19 24 0.00027 0.019 15.3 4.4 1 23 1255 1278 1255 1278 0.98

20 24 1e-05 0.0007 19.8 0.1 2 23 1304 1325 1303 1325 0.95

21 24 3.9e-05 0.0027 17.9 3.8 1 23 1331 1353 1331 1353 0.99

22 24 2.1e-06 0.00015 21.9 2.3 1 23 1359 1381 1359 1381 0.98

23 24 5e-08 3.5e-06 27.0 2.4 1 23 1387 1409 1387 1409 0.99

24 24 0.00044 0.031 14.6 0.4 1 22 1415 1436 1415 1439 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	24	0.039	2.7	8.4	0.7	1	23	214	236	214	236	0.91
2	24	0.0018	0.13	12.6	1.9	1	23	242	264	242	264	0.98
3	24	0.03	2.1	8.8	1.9	1	23	390	413	390	413	0.91
4	24	1.3	87	3.7	0.9	2	21	424	443	423	444	0.92
5	24	2.7	1.9e+02	2.7	5.2	1	23	488	510	488	510	0.97
6	24	0.00017	0.012	15.9	1.6	1	23	589	612	589	612	0.93
7	24	0.068	4.8	7.7	0.1	1	22	620	641	620	641	0.95
8	24	1	72	4.0	5.2	1	23	650	673	650	673	0.96
9	24	0.00013	0.0094	16.2	0.1	2	23	703	724	702	724	0.97
10	24	1.3e-05	0.0009	19.4	1.2	1	23	730	752	730	752	0.98
11	24	0.017	1.2	9.6	1.1	1	23	895	918	895	918	0.94
12	24	0.05	3.5	8.1	2.1	1	21	925	945	925	946	0.94
13	24	0.13	9.3	6.8	0.3	1	23	955	978	955	978	0.90
14	24	6.4e-05	0.0044	17.2	4.6	1	23	1004	1026	1004	1026	0.97
15	24	0.16	11	6.5	3.1	1	23	1033	1055	1033	1055	0.97
16	24	0.021	1.5	9.3	0.0	2	21	1082	1101	1081	1102	0.93
17	24	0.031	2.1	8.8	3.8	1	23	1147	1170	1147	1170	0.96
18	24	0.0011	0.074	13.4	0.9	1	23	1207	1230	1207	1230	0.98
19	24	0.00027	0.019	15.3	4.4	1	23	1255	1278	1255	1278	0.98
20	24	1e-05	0.0007	19.8	0.1	2	23	1304	1325	1303	1325	0.95
21	24	3.9e-05	0.0027	17.9	3.8	1	23	1331	1353	1331	1353	0.99
22	24	2.1e-06	0.00015	21.9	2.3	1	23	1359	1381	1359	1381	0.98
23	24	5e-08	3.5e-06	27.0	2.4	1	23	1387	1409	1387	1409	0.99
24	24	0.00044	0.031	14.6	0.4	1	22	1415	1436	1415	1439	0.91

Sequence Information

Coding Sequence: ATGTTGCCGACAGATATCTGTCGCACTTGTGCGCAGCAAACTGATAACTTGCTGGCGCTTTCCACATGTATTGAGACATACGTCAATAAAAGTATCAGCGAGATGCTGCAGGAATTGACTTACAATGATCCGATGGAACTCGCAGTTGATGATCTGCCGCAATATTTGTGTGCCGACTGCTTGCCCAAGTTGCAAAATGCCTATGGGTTTGTGTTGCAAGCACGTCAAGTGCAAGAGCAACTGTTGCTTGAGCTACGCAAGGATTTCCTGGCACCACAATGTCTGGATGAGACACCTATCGACATGGCATTGCAATCCATCAAGACCGAAGTGGACATACCTTTTGATGAAGAAGATACTGAAATTGCTGTTCCAATGGACACACAGTCACTTTTATGTGTGGCAGCCTTAAAATTGCAACCAGAAAGCGACAGTGAGAGTAATCAGGGCCATGTCGATGCAGATGATGATGAGGATCCCCAACCAATGCAACGTAGGCGCAGTGCGCGCAAGCCCAAACTTTCCATTGACAGCGGAGATGAAGCAGCATCGGGCAATTTAAAGCCAATACTGATTAAACGTCGGCGTGGCCGGCCAGCTCGTGTCACCAGAGATCAAACCACACCCGAAAAGGGACGATTTCCTTGCGAAGTATGCGGTAAAACGTTCTTGTGGCACCGCGACATGCAACGTCATGCCCGCATTCACTACGAGGAGCCCTCATATGTGTGCGAGCAATGTGGCAAGGGTTACATACGTAAAGACAAATATATATGCCATCTGCGCATGCATGAGAAGTGCCGAGCTAAGAGTGAGGCCCTTACTCTGAGCCTGGAGTGGCGATTTGCTGAACGGCTATATAGTTCAGGTCGCCTCAAGCGCGTGGAATGTAAGCTGTGTGGCTTCCGATGCCAACGCATACTCGAGCTGCGTGAGCATCTATCATGCCATATCACAGCTGAAACTTTGTCCGATCTTAGTGCCGACAGCGATGTCATCAGAGAACAGTTTCCCAACCATCAAGACTTGACACAAATCAGGCAAATGATCTGCGCAGACATTGCTAAAGGACGAGAACACTTAGATAAATACTGTTCAGTGGTTAATGCCCATGGCTATGAGCTCTGCCTGAGTGACTCGGACGAGGAAATAACTGGCATAACGCCTTATGAATGCCTGCCCTGCAACGCCTCTTTTACTCGCAAACATCGTTTGATGCGCCACACACTGGAGACGCACACTCAATCAACAGATGAAGCTGCCTGGCTTCGCTGCACTGGCTGCCAAATTGGCTTTGTGTGTCCTAAGTTGCTGGAGCAGCATCAGCATTCTCAGTGTTACAGCCAATTCAAGCAATATAGCTGTGCCAACTGTCCTGGTAAATTTATTTGGGAACAGAATCTTAGGCAACACGCTTGCTGCGAGGAGAAGAAGATTGTGACGGGGCAGGAGCGTCGTCAGTTCCATTGCTGTCTGTGCGATGAGCAATTGGAAAGCATGGCTACTCTAAGAAGCCACTTGCACACTCATCGGGATGGACGCACCGGCATAGATCCAAAACAATCTTCTGCCTTTCTTCGTTGCTTTTATCCCGATGGCCTCGACTGCAACTGGACAGAGCTAAGTGGAAACATTGCGAATGACTTTGAGGCTGGGGATTATGGACGATACTTTAATGCCAGTACAACTGCTGGTCAGGAGCTGGACTTCTTAGACTCGGATACTGAGTTAAGCGATAGTGAGACAACATCACCCTCAGCTCTGCACACTTGTGATTTGTGTGGTGAGACCGCCACTCGCCTAAGCCACTTGCGGCGTCATCAGGAAGATGAACACAGTGACCTTAAGGCCCTTCCTCATGTCTGTGATACATGTGGCATGGGATTCGTTGCAAATTCGATACTCCAATGGCATCGTCGAACAGTTTGTTGCAAGCGACATGCAAAGTATCATTGCACGGAGTGCAACCTTCACTTTGTATGGCAATCGAACCACGAGCGGCATATGAAGTTGGTGCACGGAAAGGCAGTTGACGATGGAAAAGCGAAAGAGTTAGAACGGCAGAGGCAAAGGAGCAGACGACAGCGAGAGTCGTCACTCAAGCTGCAGTGCGGCGAGTGCGATAAGGTTTTCATCTGGCCAAAGGATCTTACGCGTCACAAGCGCATTCATCAAACTACAGTAAAATATGATTGTCCGTATTGTGAACGCAAGTTCTTACGCAAGGATAACCTCAAGTCACATTTGCGGGTGCATGGCGAGCAACAGGAGCCACAGGAGACGGCAAGTCGGACCAATAGTGACCCAGACATCGTGGTAATGCAAGACATGCCAGCTGTGTGGAGCCAACTATGCCGTCCCAATGGCTGCAAGCAAATAAAATGCATGATTTGTTCATCGCACCACACTAAGATCTCCGATCTGCGCACTCATCTGATTTCACATCAGTTTGCGCTGCAGTTTCTGGATGATCATCCCAAGTCAGAGCTTCTATATCCGGAACTGCGAAGTGGTGATATGGACAGTGAACAATTGATTGAGCGCATCCAATTTGATTTGGCTAAAGGGGATGAGCTTGAAAGATTCGTTTCGATCACAAATGAAGCAGGTATTGAGCTTAGCCTGGACAGTAGTGAAACTGATACGGATTCGGATTCGGCGGAAACAACTGCAAGTCAAGTGTACGACTGTGATCTATGCCAATTGAAAGTGTCGCGCAAGCACCTGCTCTACGCACACCAGCTGGAGCAGCATGCCTGGCAGGAAGCTAGTCATGTCTGTAGCCATTGCCAGGCGAGATTCGTAAGTGAACAGTTGCTGGATCATCATTATCGCTCACTTTGTGGCAATCCACTAAAGCGTTTCCTTTGCCGCAAATGTCCACTACGTTTTCGCTGGCGCGACAATCTCAAGTTGCACGCAGACGTGGCACATGCAGAAATCGTTGCCGAGGAACTGCCGAGTGGAGGTATTCAATTGAAAGGGACCAGCTTGCTGCCTGTGGTCAGCTATGATTGTCACGAGTGTAAGCGAAGCTTCAAAATGCAGAAGGATTTAACACGCCACAAGTTGATGCATGCTCAGGAGACGAGCATTTATCGCTGTCGCTGGTGTTCCAGACGCTTTTATCGCGAGGCCAACCATCTGCAACACATCGAGCGACATGGCATCACTGCTGTTCAGCTGCCCTACGCGGAGGCCCTGCTGAATGCAAGTGGCCATCCAAATGGAACAAAGTGCATCCAGTGCAAGGTGTGCAATCTGCAATTTCCCACCATTGCCGCCCTCCGTTCACATCTGTTGTCTGTGCCCAGCGGCACACACCACGAGATTGGATCACTGCTCAATTACTCGATCACCAACACGTTGGGCTATGAACTTCACCTGGAGGACTCGGAAACGGATGAAGAGGCCAAGCCACCGGACACACCAGCACACTACACTTGCGGCATGTGCCAGTTGCGTTGTGGGCGGAAATATGAACTGCATCAGCACCAGCAAGCGATGCATCGACTGGAACGGATAAAAGAGGGCTGTGATGAGTGCATCTTCAAGAGTGTTTCCCCGGATCTCATTGCCTACCACAAACGAGTACAATGTGGCAACTTGGAGAAGCAATTCAAGTGTACAACATGTGGCTATAAGTTTATGTGGGAATCAAATTTGTTGCTGCACATGCAGCGGGAACACACAACTGGCAACTTGCAGGCAAAGGACGGTGAGACGGTAGCGAACCCGGTTGAAAGTACTAGCTGCCAGATCTTCAAATGCGCTCAGTGTCCACGGAAATACAATCGAAAGGATCGATTGACGGCCCATATGAAGAAGTGTCACGGACCAGGCGCTATTGGCTCAGCAACAAAAACGCCAAAGGCCTCATCAAGCGGTGCCAAACAGCAGAATAGTTTTCTTTGTGCCTTTTGTGGAAAGGCGGTGAGCTCCTCGTCGAATCTTATTGTACACATACGACGCCACACTGGCGAGAAACCGTTCAAGTGTGACTTTTGTGACAAGGCTTTCCCTCGCTCCTCCGATCTCCAGTGCCATAGACGCACCCATACAGGCGAGCGACCCCACGTCTGCACCGTGTGCAAGAAGGGATTCGCTCGCTCGTACAAGCTGCAGCAACACATGCGCATTCATAACGGCGAACGTCCCTACAAGTGCACCTATTGCGACAAGAGCTTTACACAGTCCAACGACCTGACCCTTCACATCCGTCGTCACACGGGCGAGCGACCTTATCAGTGCAACACCTGCGGCGAGCGGTTTATCCAGGGCACAGCCCTTAAGAACCATCGCCAGCAGAGTGGACACAGCGAGGACACCGAGGATCAAGCAAAAAATAACTAA
Protein Sequence: MLPTDICRTCAQQTDNLLALSTCIETYVNKSISEMLQELTYNDPMELAVDDLPQYLCADCLPKLQNAYGFVLQARQVQEQLLLELRKDFLAPQCLDETPIDMALQSIKTEVDIPFDEEDTEIAVPMDTQSLLCVAALKLQPESDSESNQGHVDADDDEDPQPMQRRRSARKPKLSIDSGDEAASGNLKPILIKRRRGRPARVTRDQTTPEKGRFPCEVCGKTFLWHRDMQRHARIHYEEPSYVCEQCGKGYIRKDKYICHLRMHEKCRAKSEALTLSLEWRFAERLYSSGRLKRVECKLCGFRCQRILELREHLSCHITAETLSDLSADSDVIREQFPNHQDLTQIRQMICADIAKGREHLDKYCSVVNAHGYELCLSDSDEEITGITPYECLPCNASFTRKHRLMRHTLETHTQSTDEAAWLRCTGCQIGFVCPKLLEQHQHSQCYSQFKQYSCANCPGKFIWEQNLRQHACCEEKKIVTGQERRQFHCCLCDEQLESMATLRSHLHTHRDGRTGIDPKQSSAFLRCFYPDGLDCNWTELSGNIANDFEAGDYGRYFNASTTAGQELDFLDSDTELSDSETTSPSALHTCDLCGETATRLSHLRRHQEDEHSDLKALPHVCDTCGMGFVANSILQWHRRTVCCKRHAKYHCTECNLHFVWQSNHERHMKLVHGKAVDDGKAKELERQRQRSRRQRESSLKLQCGECDKVFIWPKDLTRHKRIHQTTVKYDCPYCERKFLRKDNLKSHLRVHGEQQEPQETASRTNSDPDIVVMQDMPAVWSQLCRPNGCKQIKCMICSSHHTKISDLRTHLISHQFALQFLDDHPKSELLYPELRSGDMDSEQLIERIQFDLAKGDELERFVSITNEAGIELSLDSSETDTDSDSAETTASQVYDCDLCQLKVSRKHLLYAHQLEQHAWQEASHVCSHCQARFVSEQLLDHHYRSLCGNPLKRFLCRKCPLRFRWRDNLKLHADVAHAEIVAEELPSGGIQLKGTSLLPVVSYDCHECKRSFKMQKDLTRHKLMHAQETSIYRCRWCSRRFYREANHLQHIERHGITAVQLPYAEALLNASGHPNGTKCIQCKVCNLQFPTIAALRSHLLSVPSGTHHEIGSLLNYSITNTLGYELHLEDSETDEEAKPPDTPAHYTCGMCQLRCGRKYELHQHQQAMHRLERIKEGCDECIFKSVSPDLIAYHKRVQCGNLEKQFKCTTCGYKFMWESNLLLHMQREHTTGNLQAKDGETVANPVESTSCQIFKCAQCPRKYNRKDRLTAHMKKCHGPGAIGSATKTPKASSSGAKQQNSFLCAFCGKAVSSSSNLIVHIRRHTGEKPFKCDFCDKAFPRSSDLQCHRRTHTGERPHVCTVCKKGFARSYKLQQHMRIHNGERPYKCTYCDKSFTQSNDLTLHIRRHTGERPYQCNTCGERFIQGTALKNHRQQSGHSEDTEDQAKNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01551132;
90% Identity: iTF_01554097;
80% Identity: -