Zlac010960.1
Basic Information
- Insect
- Zaprionus lachaisei
- Gene Symbol
- -
- Assembly
- GCA_018901815.1
- Location
- JAEIFI010000758.1:1496390-1498109[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.5e-16 3.4e-13 48.9 0.0 2 45 374 417 373 417 0.95 2 3 0.044 1e+02 2.6 0.0 28 37 447 456 446 461 0.90 3 3 4.1e-19 9.4e-16 57.1 0.0 2 42 483 523 482 525 0.95
Sequence Information
- Coding Sequence
- ATGAATCATCTAAAATGGATGGGCCACTCGTCCACAATAATGGATATCCAGCGCGTTCTACTAAGCCAGCAGAGCAACAATCAAAGCTGTGAGGTCCTGCTGGTGGCAAAAGACGGTACAAGTGTGCGCGCTCATCTCTTCGTCCTGAGTACGTGCAGCGATCTAATGCGCAATCTATTGGTCGACTTACCCGTCGGGCAGGAGGCAACTGTCATTCTGCCCGACATACGCGGCGAGCTGCTGGAGAGCATGTTATCGTTCATTTATATGGGCGAAACTAGCCTACCCTCGGCTCTGCTTACTGAATTTCTGGAAGCCATCAATCTATTGGGCATCAAATCGGCCATAAGCTTCGAAACCAATCCCACTTCCATGAACACCTCAAATATTAGTGGAGCAATGGCGGTGGAGGCTGCAAAATCAATAAGCGGCTTGCAAATTGCGAATACATCCATAATGGAGGAGGAGGAGGAAGATGCCAACGTTGTGGTCGGCAAATTGGAAATGGCGAACACAGTGTTAGGCAATCCGCAACAGCCGCAGGAGCAGGTAGCCAGACCTTTGGAGTTTCTCGACGTATACAGCGATCAGCCAAAAATAACATATTCCATTGAGCACATGGGCGGCACAACGAGTGGCAATCAGTACATATTGACGGAGAACACGGGCACATTCACCATAACACAGTCAGCGTCTTCGGTGAATAAGCTGGGAGTACCAGCTGGCACATCTGTGGTCGAGCATGTTGGCGGAGTGAGTGTCGGTGTGGCCGGTGAGATGCCCGAGGAGGATGTGGAGGCAGAGGTTACAGACGATCACGATGAATCCGAGTCACAGTTGATTGAGGAGGAGTATGTGACATCGGGTGGCCCCTTAATAGAAATGAGCACGGATGCAGATGTTGATATGGCTGAGGAGGCAATGCACGAAGAGGATGCTGGGGACGAGGACGACGAAGAGGAAATGTTGGATGTGAAACCCCGAAAATCTCAACTGGATATGAAAATGTTGAAAACAAGAGTTCGCCAGCGTTCACCGTCCTCGAAGGCTTCAAAGAAAGTAATGACAAAACAACATCAACAATGTGCAGCACTCAAAAAGGAATTCAAGGATGACATCAATGACGCCCTCGAATTGGCCGCAGATGCAGTTCTGCACGAGGGACTTAGTCTTCAGAAAGCTGCTGATCGTTATGACATATCGAAAACAGTTCTATGGCGACGAGTGCGCTCCAATCCCGCATACATGAGAATAAAACGGGAAAAGCCTTCGTTGTCGGAGGCGTATGAGCGCTTAAAGAATGGCGACTCTCTGAAGAGCATTAGCCAAGATCTGCGTATACCTATGTCAACGTTACATCGCCACAAGGTCCGGCTGGCAGCACAAGGTCGCCTGCCCGACTTCGTTGCCTGCCGAAGGCGGGACAGCACTCCGAAGGATGAACTTCGGGACAAGCTTGCCAAGGCGGTGCATGCCTGCATCAATCAAGGCATGTCGCAGAATCATGCAGCCAATCTCTTCGAAATCCCCAAGAGCACACTCTGGCGGCACTTACAGCGTCGCGTTACAGAGGCAGAGCAGAAAGTCAAAGAAGAGCAGGAAGACGACGATGAGGAGGATGCCCTTAATTAG
- Protein Sequence
- MNHLKWMGHSSTIMDIQRVLLSQQSNNQSCEVLLVAKDGTSVRAHLFVLSTCSDLMRNLLVDLPVGQEATVILPDIRGELLESMLSFIYMGETSLPSALLTEFLEAINLLGIKSAISFETNPTSMNTSNISGAMAVEAAKSISGLQIANTSIMEEEEEDANVVVGKLEMANTVLGNPQQPQEQVARPLEFLDVYSDQPKITYSIEHMGGTTSGNQYILTENTGTFTITQSASSVNKLGVPAGTSVVEHVGGVSVGVAGEMPEEDVEAEVTDDHDESESQLIEEEYVTSGGPLIEMSTDADVDMAEEAMHEEDAGDEDDEEEMLDVKPRKSQLDMKMLKTRVRQRSPSSKASKKVMTKQHQQCAALKKEFKDDINDALELAADAVLHEGLSLQKAADRYDISKTVLWRRVRSNPAYMRIKREKPSLSEAYERLKNGDSLKSISQDLRIPMSTLHRHKVRLAAQGRLPDFVACRRRDSTPKDELRDKLAKAVHACINQGMSQNHAANLFEIPKSTLWRHLQRRVTEAEQKVKEEQEDDDEEDALN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00610763;
- 90% Identity
- iTF_01552554;
- 80% Identity
- iTF_01555509;