Zkol007435.1
Basic Information
- Insect
- Zaprionus kolodkinae
- Gene Symbol
- srp
- Assembly
- GCA_018901885.1
- Location
- JAEIFM010000498.1:6480605-6491665[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.1e-19 1.7e-15 56.2 3.1 1 35 428 461 428 462 0.97
Sequence Information
- Coding Sequence
- ATGACGAAGACGAGCAAAACCAAGGAAAAGGATAAGAGCAGCAGCATTGGCTCGCTGGAGAATGCAAAGAAATTGAAAAACTCCACAGTGCAAGCGCATGCCAAAACCACAAAGCAAAGCAGCTTTACCCAGCTAACGGTAGCTGAGCCCAGCAGCGGCCTGCACAGGGACAGCTATGGCAGCCTATCGCCGGAGCACGGCAGCTACTTCACCACACAGCTTAGTCCAGTACTGCAGAGCAGCTCTGTCTATGCATCTCCCTTGCTAGCCTCCACCGCCAGCGGCATGCAATATGGCAGCATGACAATGTCCCACTCGCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCACTGCCAGGCTTTTCACGCTTTGTCACAGCCACCGGGACTGCAGCTGGAGCTGGTTACGGCGTGGCCAATGGCGCTGGCAGTGGCGCCGAACGAGCCAACGCTGGCTACGCATCGCTGCCCAATTACCGCACACACAGCGATCCCTGGGGTCATTATGAGCCAATTAGCTACGCCACCGGCGGCAGCCAGGTGCAGCAAGTAGTGGGTGGCGTTGGCGGAGGCAGTGCCTCCGCTGCTGCTGCCGCAGTGACCAATGTGATACGCAGCGGACGTGCTGTTGCCCAAGCAGCAGCAGCCGCGGCACAGGCAGCTGGCGATGCCGTCGGCACTGCCGGCACAGCTGGCACAGCCGTTGATCCTCGCCTGCTCGCCAGTGCAGCTCATCTCTCCGCATCGGCATCGTTGACAGCAATGGCCGCTGAATCAGGCGGGGATTTCTATAAGGGCTACCCATTTAACGTGACGCAGGGCGGCGCAGGCGCAGGCGCAGGCGGCATAGGGACGACAACAGGACGCAGCAAGTCTGCCCTGTCCAAAGTCGCGGTTGCAGCCGCTGCCGCCGCCGCTGCCGCCGCCGCCGCCGCAGCGAACGCCAGCAGCGCTGCCGGTGCCACTGGTGCAACGTCGACAACGTCACCGCAGCTCGACGAGCACGTTAGTCGCGCCAATTCGAGACGCTTGAGCAACTCACGTCGCACTGGCATGATATGCTCGAACTGCCACACCAGCCACACATCCCTGTGGCGCCGCAATGCATCGGGTGACTCTGTGTGCAATGCCTGCGGTCTCTACTACAAGCTGCACAATGTGGTGCGACCGCTGACCATGAAGAAGGACACCATCCAGAAACGCAAGCGTAAACCGAAGGGCACCAAGGGTGAAAAGTCAAGGAAAATGAAGACTGCACAGGCGGTGGCCCTGGTGGCAGGCCAGAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACGGATGAGGGTAAGTGTTGCTAG
- Protein Sequence
- MTKTSKTKEKDKSSSIGSLENAKKLKNSTVQAHAKTTKQSSFTQLTVAEPSSGLHRDSYGSLSPEHGSYFTTQLSPVLQSSSVYASPLLASTASGMQYGSMTMSHSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALPGFSRFVTATGTAAGAGYGVANGAGSGAERANAGYASLPNYRTHSDPWGHYEPISYATGGSQVQQVVGGVGGGSASAAAAAVTNVIRSGRAVAQAAAAAAQAAGDAVGTAGTAGTAVDPRLLASAAHLSASASLTAMAAESGGDFYKGYPFNVTQGGAGAGAGGIGTTTGRSKSALSKVAVAAAAAAAAAAAAAANASSAAGATGATSTTSPQLDEHVSRANSRRLSNSRRTGMICSNCHTSHTSLWRRNASGDSVCNACGLYYKLHNVVRPLTMKKDTIQKRKRKPKGTKGEKSRKMKTAQAVALVAGQNXXXXXXXXXXXXXXXXXXXTDEGKCC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -