Basic Information

Insect: Zaprionus kolodkinae
Gene Symbol: -
Assembly: GCA_018901885.1
Location: JAEIFM010000181.1:565242-567528[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 2.7e-05 0.0018 18.5 2.5 1 23 412 434 412 434 0.97

2 7 1.7e-05 0.0011 19.1 0.4 1 23 440 463 440 463 0.98

3 7 0.02 1.4 9.4 0.7 1 23 469 492 469 492 0.92

4 7 3.3e-05 0.0022 18.2 0.8 1 23 528 550 528 550 0.95

5 7 0.00054 0.037 14.4 1.5 1 23 556 578 556 578 0.98

6 7 7.2e-05 0.0049 17.1 0.8 1 23 584 606 584 606 0.98

7 7 0.0022 0.15 12.4 2.5 1 22 612 633 612 636 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	2.7e-05	0.0018	18.5	2.5	1	23	412	434	412	434	0.97
2	7	1.7e-05	0.0011	19.1	0.4	1	23	440	463	440	463	0.98
3	7	0.02	1.4	9.4	0.7	1	23	469	492	469	492	0.92
4	7	3.3e-05	0.0022	18.2	0.8	1	23	528	550	528	550	0.95
5	7	0.00054	0.037	14.4	1.5	1	23	556	578	556	578	0.98
6	7	7.2e-05	0.0049	17.1	0.8	1	23	584	606	584	606	0.98
7	7	0.0022	0.15	12.4	2.5	1	22	612	633	612	636	0.91

Sequence Information

Coding Sequence: ATGAAGTGCGCGGTGCATAACTGCTCCAACAAATTTAAGGCGAAACAAAAACATTCGCAGCAATTCAGTTTTTTTAGTTTTCCCAAAAACCCAGACATTTTAAAAGAATGGATTGCATTTTGCCGAAAGAACAACAAAGATAAACAACGAAAAACCTACCTGAAGAGCGTCATTTGCAACGAGCACTTCAAAGATGAGGATATTCAAGGGGGCTTACAATTTCAAATGGGACTCTGTACAAAGAGAACACTCCGCCCAGGCGCAGTACCATGCATTAATAAAAACAATATTAGTGAGGCTGAACGAGAGCGTTCAGAGAAACGCAAGAACCAAAAGCTTGTTGCCGAACTACTGGAAGAAGCAGCAGTACGAGAGGAAGCCGAAGCCAATGGGGATATTGTGATCGCTCCGTCATTTGTCCGTAATACTGGCATAGTGTCCGTACCAGATTTTGTTAGTGCCACTGGAAACGCATTTGTTCCGTCTATGCCGATACCCACTGAGAATGATCCACTGGCCGAGGAACTAGAGGAGATATATGCTTCCACAAAACTCAGCGAAACAGCTGAAAGTCCGAATGAACAAAAGAAATGTCGCACTTGCTATCGTCAATTTGTAATAGATGAAAAGGCAAAAGATCTCTGTGAAGAACAAAACGCGGTCATGCTGTATCATATTGAAGTTATTACAGGAATTTGGATCCAATGCCACGATGAGACCTATCAGTTTATGTGTCCAACTTGTGTTGATAACTTACGCATTGCCATCGAATTTCGAGAAACATGTATACAGACAGAACTCCAACTTGCTAGCGGCGATAACATACCGATTCAAGCAGATGTAGAGGAATTTGAGCCTCATCTGAAAAGCGAAAATGATAACAAGGATGATTTCGTTTCCGTATTTCCTGCAGATGGAGAAAACGGCCAGACAACTGTAGTCGAATCTTTGTCACATGCAAGAGCGAGTCAAATTGTTCAAGGACTTCACCCGGCAGCGGCAGATCCAAATAGTATTGCTTTGGGTGCACAAATATATGAGGATCTTCTAAATGAATACAAGGGTAATGATAAAACAGTACGACCTAAAACACGAAAGATAACAGTAATAAGGGGAAAGGAGAAAAAGCCAAAGCGACTAAGACCATCCGAATCAAAACCTAAACGAGAGAAACGAACGAAAGAGGAAAAAAATCGGATACGTCGTGAGCAAATCAGAGCCTTGCCCCTAAATCACGTGTGTGACCAGTGCGGCGCGTCGTTTCGTGTGAGATGTAACCTAACCATTCATATGCTGCGTCACACACAGACAAAGAACTACAAATGCCCTGAATGCCCCAAGCAGTTCTATGACGCCTATATGCGAAATATTCACATACGAGTCCGTCACAGAGGCGAATTACCGTTTGTCTGCAATTACTGTCCGAAAGCGTATGGCTCATCCAACACACGTTATCTACACGAAAAAAAAGTACATGGAGCAACGCCACGGATTCACAGGAACTTGAATAAGATAAATCGAAGGCTTGATACAAAGGATAATCAAGAGTTGGCAGAGCAAAAGCCAAAGGAAAGTGTTCGTCATTTTTGTGGATACTGCGACAAAAGCTATGCAACTAAATATGCCTTGAATGGGCATATTAATGCCCACATCGGTGTTAAACCCTTTAAGTGCAAACTCTGTGACATGAGATTTCCGGATCCACAATCAAAAAAAAAGCATGAAATGCGACACGATAGTAAAAGACCTTACGAATGTGACATTTGTCTAAAGGGCTTCTATACACGTACAAAACTGAAGGAACATGAACGAATCCATACTGGCGAACGTCCTTACAGATGTGATGTATGCGACGCCTATTTTCGGTATAAGTTTAACCTATATTCACATCAGTTTAGTAAAATGCATAAAGAGAATGTGCAGAAAGTGCAAAAGAATGAAACTGTCGAAGACTCTAGTTAA
Protein Sequence: MKCAVHNCSNKFKAKQKHSQQFSFFSFPKNPDILKEWIAFCRKNNKDKQRKTYLKSVICNEHFKDEDIQGGLQFQMGLCTKRTLRPGAVPCINKNNISEAERERSEKRKNQKLVAELLEEAAVREEAEANGDIVIAPSFVRNTGIVSVPDFVSATGNAFVPSMPIPTENDPLAEELEEIYASTKLSETAESPNEQKKCRTCYRQFVIDEKAKDLCEEQNAVMLYHIEVITGIWIQCHDETYQFMCPTCVDNLRIAIEFRETCIQTELQLASGDNIPIQADVEEFEPHLKSENDNKDDFVSVFPADGENGQTTVVESLSHARASQIVQGLHPAAADPNSIALGAQIYEDLLNEYKGNDKTVRPKTRKITVIRGKEKKPKRLRPSESKPKREKRTKEEKNRIRREQIRALPLNHVCDQCGASFRVRCNLTIHMLRHTQTKNYKCPECPKQFYDAYMRNIHIRVRHRGELPFVCNYCPKAYGSSNTRYLHEKKVHGATPRIHRNLNKINRRLDTKDNQELAEQKPKESVRHFCGYCDKSYATKYALNGHINAHIGVKPFKCKLCDMRFPDPQSKKKHEMRHDSKRPYECDICLKGFYTRTKLKEHERIHTGERPYRCDVCDAYFRYKFNLYSHQFSKMHKENVQKVQKNETVEDSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01554732;
90% Identity: iTF_01554732;
80% Identity: iTF_01554732;