Basic Information

Insect: Zaprionus kolodkinae
Gene Symbol: -
Assembly: GCA_018901885.1
Location: JAEIFM010000288.1:6687488-6699812[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.049 3.3 8.2 1.5 1 23 757 779 757 779 0.96

2 7 1.7e-05 0.0011 19.1 1.1 1 23 785 807 785 807 0.98

3 7 5.7e-06 0.00039 20.6 0.6 1 23 813 835 813 835 0.98

4 7 1.6e-06 0.00011 22.3 1.2 1 23 841 863 841 863 0.98

5 7 0.00047 0.032 14.6 1.8 1 23 869 891 869 891 0.97

6 7 5.1e-06 0.00034 20.8 2.4 3 23 899 919 897 919 0.94

7 7 0.0013 0.087 13.2 0.4 1 19 925 943 925 946 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.049	3.3	8.2	1.5	1	23	757	779	757	779	0.96
2	7	1.7e-05	0.0011	19.1	1.1	1	23	785	807	785	807	0.98
3	7	5.7e-06	0.00039	20.6	0.6	1	23	813	835	813	835	0.98
4	7	1.6e-06	0.00011	22.3	1.2	1	23	841	863	841	863	0.98
5	7	0.00047	0.032	14.6	1.8	1	23	869	891	869	891	0.97
6	7	5.1e-06	0.00034	20.8	2.4	3	23	899	919	897	919	0.94
7	7	0.0013	0.087	13.2	0.4	1	19	925	943	925	946	0.95

Sequence Information

Coding Sequence: ATGGCGGTTGAGATAACTAACTCGTTATTATCACTGCAGCCTGGCGTGGAGGCCGAGGCGGCGCTGCCGCCCCAGTCCTTTCATTGGCAACTCGAGGATTACGCATATTTTCACAAGTGCGGCGAGATTACCACCTCGCCGGACGTGCAGTGTTTTGGCTTCAATTGCGCCTTCTGTCCCGCAATTTGCCTGCAGTTCTCGGTCTTCATTGATCACATACGCAGCCAGCACATGCAGGATATGCGCCGGCGCTACGAGGTTGCCGATGAGAAAATCGAACAAACAACGCAGACCGATTTCAATCAAATGCTAATGGACATGCACATGGACAGTGACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGCTATTCGCCCCGACAAGCGGACGAAGAAGGCAAATTGGAATGAGACGTGGGGGTCGGCGGCAGCAGAGACAACCCTGGGGCTGGCGAACGTGTGCATGGACATGGGAATGGGCATGGATATGGGAAATGTTGTGCCACAAACGCAATCGCAGCTGCAGGCACCCAGCAGCAACAACATTTCGACGCTACTGCAGCTTAGCAACAAAAGCCTAATAACAACAACGACGACGACGACGACGGCGACGACAACTCCAACCGAAATAGACTTCGTTCATGTTCTAGAAAATCCATTGCCGCCCTCGCCTCATCCCTATACTCTACAAACAGTTGACAGCCCTAGACTGCACTCGATAGATTCATGCGGAATGATACATGAGTTGAGTGACGCCGCTGCCGCTGCCGCCGTCCCGATTACGGCGCTACCTCCACCCGCATATGCAGCTACGCTGGAGACGAACTCCAGGGGCGCCGTCAGTGTTGCCACACCGCACCGTTACGAGACGCGACGCGTGGCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAACTTGCTGGAACTGACACCTCCAGCCACGCCACCGACACCCGTTGCACCCACCTCGCCTACCAGCAGCTTTGCCGGCAGCGTAGCGAGCAGCCTCGACTTGAAGTTGCGCACACGTCGCGAACTGGAGCGTAATCGCGAATTCGTCTGCTCACTTCTGGTGGCCTATGAGCGCAACGAGAAACTGTGGAATCCCAAGCATCCGGATTACAAGTACAATGCAAAGCGCAGTCTCTATGGCGAACTGGCTGCACCACTTCAGGCTGTCTTTCAGATGCCCCTCACAGGCAGCGAGATCTTTGCGGTGCTCAAGGAGCTGCGTGGTCGTTATCGTCGCGAGCTGAGCAAATTGAATGCTCTGGGCAGCAAGTACAAGTCGCGTCTGTGGTATTTCGACAAGATGCACTTTCTGCGCGGCGTCATCGAGCACAAGCGTGCCGAGAGGGAGGCTAAGACCGATTCAACAGAGAGTGAGAAATCCAGTGAAACCGATAATGAGTCCACCTCAAAGTCAGCGCAATATCGCGAGGTGCTCAGCTTCATAATCGATGCATTTCGACGCCAGGAGAGTCTCTGGAATCCACAGCACTTCGATTACAACAACTGCTGCAAGAAGGAACTGTATCGCGATATCTCTGCAGAGCTGCTCGAGGAGCTCAACTACGAGATGAGCGGAGAGGAGTGTTTTAAGGAGATTCAAAAGCTGCGCACACGTTATCGGAAGGAGCTGCGCATGGTGATCAAGCATAAGGGACTCTATCTGCCCAAGCTCTGGTGCTACGATGAGCTGGAGTTTCTGCACAAGATACTGCAAGAGCAGATCTTCAACAAAATCAGCAAGAAAAAGGGAGTAGTGGAAACGAATCAGAAGACAAAGTTCATCAATGCCAGCTGCATTCGCTTCGACTCGCAGGACGATCAGCTGCAGTTTGTGGAAATCTATCGCAATTATCCTGCACTGTGGGATGTGGATCATCCTGATTTTCGCTCGAATGCGTATCGCAATCAGGCATTGAGTCAAATGCTCGACGAGCTTAACACAACGTTTCAGTGTGCCTCGACAGCGGCACAGCTGGAGAAGACACTGTTCGAGCTGCGCAAGGATTTCTCGGCGCAAAAGCGTAAAATACTCACAAACCCAGCCGCCTCCAGTAGCATACCCTTGCTGCACGCAAAGCTGGGTCAATTTCTCGAACCGAATCTGGGCCCATTTCGCTGTGATATTTGTGATGAATTGATCAAGACGTGCGATCAGTATAAGGTGCATCGATCCGGCCACGATGGCACGCAACCATTCATCTGTACGCTGTGCGGCAAGGGATTCCAGATGCCATGCAATCTCACTGTGCACATACGTCGCCATCGAGGCGACTTTCCCTATGCGTGCGAGCAGTGCGACAAGCATTTTGCCACCTCCACCGAGGTGGCCATACACATGCGCACTCACACCGGCGAGCGTCCCTACATCTGCGATCTGTGCGGCAAGTCGTTCAAGACATGGTCTTTCTTTGACATCCATCGGCGGACACACCTCAACCAGTCGACGTTCCATTGCCCCATCTGCGATAAGGGGTTCTACGAGAAGAATCGCTTCACTGACCACATGAACGCCCATCTCAATATTCGCAAGCATTTGTGCACCGTCTGCGGCAAGACTTTTACCACATATGGCAACCTCAAGAAGCACACCGAGCTCCATCTGGCCGTGAAGAAGTACAAGTGTGGAGCGTGTGGCAAGCGGTTTGCGCAGTTTGCCAGTCTACGCTGGCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACCATTTAAAGAGCTATCTATCTCGAACACTGTCCATACATATCTTTAG
Protein Sequence: MAVEITNSLLSLQPGVEAEAALPPQSFHWQLEDYAYFHKCGEITTSPDVQCFGFNCAFCPAICLQFSVFIDHIRSQHMQDMRRRYEVADEKIEQTTQTDFNQMLMDMHMDSDXXXXXXXXXXXXXXXXXXXXXXXXXXXNAIRPDKRTKKANWNETWGSAAAETTLGLANVCMDMGMGMDMGNVVPQTQSQLQAPSSNNISTLLQLSNKSLITTTTTTTTATTTPTEIDFVHVLENPLPPSPHPYTLQTVDSPRLHSIDSCGMIHELSDAAAAAAVPITALPPPAYAATLETNSRGAVSVATPHRYETRRVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXENLLELTPPATPPTPVAPTSPTSSFAGSVASSLDLKLRTRRELERNREFVCSLLVAYERNEKLWNPKHPDYKYNAKRSLYGELAAPLQAVFQMPLTGSEIFAVLKELRGRYRRELSKLNALGSKYKSRLWYFDKMHFLRGVIEHKRAEREAKTDSTESEKSSETDNESTSKSAQYREVLSFIIDAFRRQESLWNPQHFDYNNCCKKELYRDISAELLEELNYEMSGEECFKEIQKLRTRYRKELRMVIKHKGLYLPKLWCYDELEFLHKILQEQIFNKISKKKGVVETNQKTKFINASCIRFDSQDDQLQFVEIYRNYPALWDVDHPDFRSNAYRNQALSQMLDELNTTFQCASTAAQLEKTLFELRKDFSAQKRKILTNPAASSSIPLLHAKLGQFLEPNLGPFRCDICDELIKTCDQYKVHRSGHDGTQPFICTLCGKGFQMPCNLTVHIRRHRGDFPYACEQCDKHFATSTEVAIHMRTHTGERPYICDLCGKSFKTWSFFDIHRRTHLNQSTFHCPICDKGFYEKNRFTDHMNAHLNIRKHLCTVCGKTFTTYGNLKKHTELHLAVKKYKCGACGKRFAQFASLRWHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFKELSISNTVHTYL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01559287;
90% Identity: iTF_01559287;
80% Identity: -