Zkol015147.1
Basic Information
- Insect
- Zaprionus kolodkinae
- Gene Symbol
- hang
- Assembly
- GCA_018901885.1
- Location
- JAEIFM010000028.1:534470-542850[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.23 15 6.1 1.0 3 23 171 192 170 192 0.93 2 16 0.17 11 6.5 3.5 3 22 299 318 297 318 0.89 3 16 0.00049 0.033 14.5 3.3 1 22 412 433 412 435 0.90 4 16 0.057 3.8 8.0 0.1 2 21 447 466 446 467 0.93 5 16 0.00057 0.039 14.3 0.2 2 23 603 625 602 625 0.95 6 16 0.0016 0.11 12.9 0.1 1 23 633 656 633 656 0.96 7 16 1.3e-05 0.0009 19.4 0.1 2 23 742 763 741 763 0.97 8 16 0.00023 0.016 15.5 2.9 2 23 875 897 874 897 0.97 9 16 0.018 1.2 9.6 0.2 2 23 906 928 905 928 0.95 10 16 0.0018 0.12 12.8 0.1 1 23 941 964 941 964 0.97 11 16 0.0001 0.0069 16.6 1.1 1 23 1019 1041 1019 1041 0.99 12 16 0.0016 0.11 12.9 0.9 1 23 1049 1072 1049 1072 0.96 13 16 0.056 3.8 8.0 0.4 2 19 1080 1097 1080 1098 0.94 14 16 2.1e-05 0.0014 18.8 0.4 3 23 1199 1219 1198 1219 0.98 15 16 0.0041 0.28 11.6 0.1 1 23 1254 1276 1254 1276 0.97 16 16 0.0053 0.36 11.3 0.3 3 23 1369 1389 1369 1389 0.98
Sequence Information
- Coding Sequence
- ATGCCGACTCCACCGCCGCCGCCGCCGCAGCAGCAGCCACAGTTGCAGCTATCGTTAACTCCAGCTGCAACAATGACAAGTAACGTCGCGGCCACCGCCTGTGCCGCTGGCATTGCCTCAGCCTCAGCCGCAGCAACAGCTACAGCTACAGCTACAGCGACAGCCTGTGCTTCTGCTTCTGCGGCATCGTCGTCTGCTTGTGCCGGCACTGTCTCTGCTGCAGTCACGACTCCGTTGCTCATGCCGCCGCTGCCCGCCGTGCCCATCAAGGATGAGCCCCTGGACGATACGGATGATGACTTTCAAATGAAGTGCATTGACGAGTCCGATGACATGATGGATCCCACAATGTTCCTAGAGCGCTCAGAACATGAGGGCGATGTGCCAATAATGACCTCCGAATATGATTATGCGACGCAGCATGGCGTAACGGCGGTTGCGGCAGCAGCAACGCTACCCGCCTCCGCTGTGGCAAATGTGGCAGCCGCTGGTGATTCCAAGGTGGCCAGCTGCCGTGCCTGCAGTCTGCAATTCTCGACGCGAGCGAATGCGCGACGACATGAACGCAATCTGCATCCGAATCTATTTCAATTGTCAACAGATTCACCCAATAATACGCCCATAACAAAACCGACCCCAGCATTGGCTGCCGCATTGGAGATACAACGTGCCGCCGCAGCGGCGGCAGCAACAGCGGAGGCAACAAAAGCCGCGGCTGGTGGCAATATATCGACACAGAAATATCGCCAGGTGGTCATGAATACGTTCATCAAGTGTGAAAACGGTGGCTATGACTATGACAATCCGGAGCAATACCAGCAGCTGTTGACGCGCGACAAGGTTGAATTCATTAAGGAGAATAGTGAATTTCTGGAACAATATCAGACAATGACCTGCCGCTGTTGCAACAAATTTTTCAGCACGTACAAGAACTTTATGGCGCATGTACGAAAAAAGTATCCCTTGTTGCCGCGTAACTTATGCTTTAATTGCCTCAAGATGAACGATTCCAAAGCGTTGTTCATATCGCATCTTAAGAAGCGCAACTGCATCAATTTGTATCGTGTACTGAATGCACTGCGTGCCAAACAACCCAGTTTTAATCATGCCACGGCAGGAGGATCTGCAGATCAACAGCATCTGCAGATGTCTACATCGTTGACGTCGGTGCATGATACCTCAGCAGATCGGCCAGAGAAACTGCGTGCCAAGGAGCTGCTGGTCAATAAGCTATACGAATGCAAACTCTGCCCCAAAGGATTTCGCACAAAGCATGAGTTTCGCACCCATGTCTATGACAAGCATGCGGATGTGCAGCGTAAAGATAACAATTCGATACAATGCAGCTTCTGTGGCTTGGACTTTGCCGATCCAGTCGATAGGCGTCGTCATTATAACAATATGGATTGCATTGTACGACTGCGCTGCATGACATGCGATGCCAAACTGGAGACACATCAGCGTTTTCTCGATCATGTCTATCAGGATCATTTGGGCGGTGTGAGCAGCGATAATGCGTCGACAGCTAACAGCGGCTTGGATCATTCCCCGGGCAAGCGTAGCCTATTGGGTGCACTGGGCATTGGGATTAGTCAATCGTCTAACGAAGAGTCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTCACGTATGCCCCAGGTGTGTCCGATTTGTGGACAGCAGTACAACAATTACAACAATGTGCTGCGGCATATGGAATCGAAGCATCCCAACAAATTGCCCGAAACCTATAAATGTGTACGCTGCGGATTGGGCTATCCACGGATATCGTATCTGCGCGAGCATATGATTAATGTGCATGGTGTGGACAAGAATCGTCATTCGGGCGGTTTTGAGTACATTGTAAATGCGGATGCAGTCAAGCTGGCGGATGGCAGTACACCCAATGTCTATACAGGACGTTATGACTATGTGATGAAGGATTTGATGTCCATAACAAATGGTGGGACACTCGATGATGACGACGAGGAGACCGGCAGCATAGCCAAAAAGATGCGTCTCGACGACAGCAGCAACAACAGCAGCATCAACACAAGCATTGCCAATCAACAAAAGGAGTGCCCCATCTGCAATGCGGTGTTCAGCAACAATATTGGACTCTCGAATCATATGCGCTCACACTACACTGCCTCGACGGCGACAAATGCAGCATTGGCGGCAGCAAACCGCATGACACCCAAATCGCTGACAATCACAGCAACGCCCCCACTGGATGCATCAGGGGCAAATACAACAGCAGCAAGCCAATCGATTACAACCATAACCGCAGAGGATGAAGACGCATTGGATGGGCCAACAAGGGGTGGCATGACTGCAGTGACAGCAACGTTAGCTGGAGGAGCGGTGGGAGCCACTGGCAGTTTGCCGCCAGCTATGGCCCATCAAACGCCACAGGAACAGGCTGTCTTTAGACGCAGCTTGGATCAGGCAGCCGATCGTCGCTTTCGTCGCATGCGTTGTCGCATCTGTCAGCGTCGCTTTAGCTCTAAGAAATCCTATCGCTATCACATGCTGACCGATCATCAGGTGCAGAATGTGCAGTTCATCAAGTGCAAGCTATGCAATGCTGAATTCGCCTATGAGAAGGGACTTAAGGTGCATCTGTTCAAGGTGCACGGTCGTGCCATTAAGGATGAGATGATTGTCAAGCAATTCGAGTGTGATGTCTGTTCGATTGTCTACAGTTCGGAGTTGGAACTGCAGCAGCATAAACGCAGTGTGCACAGATCCCAATTGGGCAGCAACGCCAGCAGCAGCAGTGGCGCCGCAGCGCATGCTGTGAGCAATTCACAGAAATCTGCAACGGCCACAGCAACCACTACGAGCTCTGGTGATATGGGTGACACATCGGCTACGGTGGCTGCCACAAGCCTGCCACTCTACTGGTACCAGTGCAAGTATTGTCCATCAAATTTCAATACCAACAAGAAATTGGCAATCCATATCAATTCGCACGATGAGTTCGATTCGAATGATTATTCGTGCAAGGATTGCGGTAATGTGTACAGCGGACGCAAGAGTTTATGGGTGCATCGCTATAAGAAGCATCCGCAGGTGCCCGATCCCGCTGAATGCACCCTCTGCCGTAAAATGTTCTTTGATCGACAGATGCTGGAGAACCATACACCAACCTGCAATCGGAAACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGATGATGACGAGGAGGATGAGGATGATGATCAGCAGTTACTTCTACTAGACGATGGCGGTGGAGCCGGAGGTGCTGCTGCTGCTTCAGGGGACGGTATCGATGGAACTGTTGGCAAGGCTGGAGGCACAAAAAATCTTAACACAGGCACACTGAAGATACGCATACCTGAGGTGGCGTGCACCATTTGTGGAGCACGCTTCACAGATCAGGAAATGTTTACCAAGCATATCCAGCGACACGAACAGGAACTCTATGTTGATAATCCTCTAGCAGCGATGTTCGATGATGGTCCCGCTGATGCTGGACAATTTCAGGTTGAGCGGCAGAACGAGAATGGGGAATATGCGTGCGATTTGTGCGCCAAGACGTTCCCCCAGGTGATTGCACTGAAGGTGCATCGCAAGTGGCATTTCAGAGGTGATAGCAAGCAGGTGAGCTTTTTGGGCTTGTGCAGCGAGGTGAATCTAATCAGTATCCAATGCGGTAACAACAACCTGCGTCGCCACATGTATGAGCTGCACAAGCACGAGGTTAGCACACTGCCAGAGCCGCCGGTTATCGAAGTGGATGATCCATTGACGTGTCGTCGTTGCGGTCAATTACGTTTCGAGACAAAAGAGCAGTGGATCGAGCATAAATTGGCCGATGCCAAGGTAGTCCGTCCATTCTGTCCATTCCAATGGGGCTGTGATCTATGCGGCGAATATTTGTCGCGCAAGGAGAAGCTTATCAATCACATTAACAATCATCTCAAAGAGGAGGTCATTGTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAGCTGGACAAACAACAAAACCCACAGCGGCGGTTAAAGCGGCCGTCAAGTCCAAGACGGAGGATAAAAAGTTAGCGAAGGCGACAGGTGTTGGTGAGCAAATTGAAGATGGAGAGGAGGATGGTGAAGCTGATAGCGAGTTGGAAGATGATACGGATAGCGATGATGATGAGGAGAGCACAAGTGCCGAAGACGAAGACGATGTGGATGGTGAAGGTGATGGCGATGAGGATGACGACGAAGAGGAGGACGACGAGGATGAGCGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAGGCACATCCTGTGTCCGATAACAACAACAAACAAGCGACGCGCCTGAATTTCGCCTACTCGCGCAGCGACAAGCTCAATGGCAATGGGAATGGCAAACAGACGCCATCCCAGACGGCAGCGACAAAGTCGACAAAGCCACAGTCGAGAGTTTGA
- Protein Sequence
- MPTPPPPPPQQQPQLQLSLTPAATMTSNVAATACAAGIASASAAATATATATATACASASAASSSACAGTVSAAVTTPLLMPPLPAVPIKDEPLDDTDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPIMTSEYDYATQHGVTAVAAAATLPASAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISTQKYRQVVMNTFIKCENGGYDYDNPEQYQQLLTRDKVEFIKENSEFLEQYQTMTCRCCNKFFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRAKQPSFNHATAGGSADQQHLQMSTSLTSVHDTSADRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNASTANSGLDHSPGKRSLLGALGIGISQSSNEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEETGSIAKKMRLDDSSNNSSINTSIANQQKECPICNAVFSNNIGLSNHMRSHYTASTATNAALAAANRMTPKSLTITATPPLDASGANTTAASQSITTITAEDEDALDGPTRGGMTAVTATLAGGAVGATGSLPPAMAHQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDVCSIVYSSELELQQHKRSVHRSQLGSNASSSSGAAAHAVSNSQKSATATATTTSSGDMGDTSATVAATSLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECTLCRKMFFDRQMLENHTPTCNRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDEEDEDDDQQLLLLDDGGGAGGAAAASGDGIDGTVGKAGGTKNLNTGTLKIRIPEVACTICGARFTDQEMFTKHIQRHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGDSKQVSFLGLCSEVNLISIQCGNNNLRRHMYELHKHEVSTLPEPPVIEVDDPLTCRRCGQLRFETKEQWIEHKLADAKVVRPFCPFQWGCDLCGEYLSRKEKLINHINNHLKEEVIVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAGQTTKPTAAVKAAVKSKTEDKKLAKATGVGEQIEDGEEDGEADSELEDDTDSDDDEESTSAEDEDDVDGEGDGDEDDDEEEDDEDERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAHPVSDNNNKQATRLNFAYSRSDKLNGNGNGKQTPSQTAATKSTKPQSRV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01559190;
- 90% Identity
- iTF_01559190;
- 80% Identity
- -