Zkol003189.1
Basic Information
- Insect
- Zaprionus kolodkinae
- Gene Symbol
- bab2
- Assembly
- GCA_018901885.1
- Location
- JAEIFM010000288.1:3319134-3329487[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-10 7.2e-07 28.7 0.0 1 44 617 660 617 661 0.91
Sequence Information
- Coding Sequence
- ATGTTGCGAAAGAGCTCGGCTCGAGTGCAGTTTATGGCCAGAACGGACTGGCAGGCCGGCAGACAGCCGAGTTTCTGCCAGTCCGGAACCACTGTGCGCTGCAGGTTGCCCATTGTCGGCGGCGGCAACGGCAGAGGCAGCTTCTGTCCAGAGCCTGAACCTGTGCAAACAATCGGCTTTCGCTCTGGCAACTGGAGCAACGTAAGCCTTAAGCTGGCGCTCAAGGTCAGAAAGCATCTCGCCTCATACTCGCCCACCCTGCTGAGCGCCGCGTTCACCAGCAGCCTGAACAGCGCCTACAACAGCAGCAGCGACACCGCACCGGACGAGGAGCCGGAGACGCCTCCAACGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGTTGGAATAATCATCAAACGAATCTGGTGCAGATCTTGCATGCCCTGCACGAGGTGGGCAGCTATGTGGACTGCACCCTGGTTGTAGATGATGAACAGTTCAAGGCGCATCGTGTAGTCCTGGCGGCGAACTCTCCATACTTTCAGGCCATATTGCAGGATGTGCCACAGGATCAGTGTAGCATCATATTGCCGGGTGTAAAGGGATTTGAGATTGCCGCCTTGCTGCAGTATATGTACACGGGTGAGACGACGGTGACGAAGAGCCAGGAGCCGGAGATCCTACGCACTGCCAAGGAGCTGCAGGTCAAAGGTCTCTATGATAATCTAATGAAGTTCAATCACAAGGCCGCCGTGGCAGCGGCAGCTGCAGCCGCAGCAGCTGGCGAGGATCGCACACAGAGTCAAGAGTTCCGGGGCAGCACTGGTGGAGCAGCATCCTACCATGCCGCACCCACCAGCAGCAGCTCCAGCAGTTCGACTGGCCACAAACCACAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCCTCCTCGGTGATCTCAACTTCGACACACATCTCGCCCAGCGCTGCCATCTCGAGCAGCTGCTCGCCACCGCCTCCGCCCTTTGGAAATGCGGCGTATCAGGCAGCACCGTATACGGGTTATCCGGCAGCCTCATCGGGTGTTCCACTGAATATCAATGCACACATTCCCGCTGGAGGTGAGGCACCACTGACGCCCACCCATACCACGCCCACTCATCATGCTGCGGGGGAATCAGCGGCGGGTCAGTGGCCATTGTCGCCATCGGCTGCCACTGCTGCTGCCATGTTGAATTCCGTCTATGATTCCGCTGCCGATATGAATCCTCTCAAGCGTAAAAAACTTTCGGCCATTTCGAGCATGTTCTTCAATAGCACCAGGGACACGCCCATCTTGCGCAATGTGCTGGCACAGGCCAATCCGGCGGACTCCTCTCAGCCTAATCCTTTGTTGCTGCCCAAGAACTCCTCCTCCTCCGGCTCCGGCGGCGTGGAGAAGACACCAACACATCAGCAGCTAGCGGGAAGCGGAGCTGGAGCTGGCAGTGTCAGTGGCGCCGGTAGTCACAGTTTCAATGGCTCCGACTATGGTGGCGATAAGGAACCACTCTCGCCGCACACCGATCGCTCCTTTGACGATGAGACCGGCGTGGGTGGCGGCGGTGGCAGCGGCGGTGGGGGCAAGAAACCCGAGTGGAAGCGTTACAAACAGTATACACGCGCGGACATGATGTGCGCCATCCAGTGCGTCCGTGAGGGCATGAGTGCCCTCCAGGCGAGTCGCAAGTTTGGGCTGCCCAGTCGTACGCTGTACGACAAGGTGCGCAAGCTGAATATCACCACGGGACGTGGCACACATCGCACCCCAAAGCGTAGTCCCCCCGGTGAATCCTCTGCAGCGTTTCCCTATTCCGCCGCGGCAGCGGCAGCGGCAGCAGCAGCGCATAATTATGGTCAAACAGAGTTGGATCATCGTGAGGCCAAGGAACATGGAGTGACGGTAGCTGGAGCTGGAGCCGGTGGGCCGCATCATGGCATGCCGCCAACCATTTCGCACTCGGCCGCAGCTCTGCTCGATCATGCGTTCCTGCAGCAGGCGCTGGAGAATCGTGGAGGTGATATTGCGGGACGTGAGGCCCTGCATGCCATGGCATTGGCTGCGGCGGCACATGCCGCTGCCAATCGTATGTCCAGCAGTCCACCAGGTTCCAATGGACATGCAGCACGTGGTGGTGGTTCTCCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCATTATCAAGCGTGAGGCCATCGAGGATGAGCGTGATGCTGACGATGAGGATGATCATGATCAGGTGGAGGATTTGTCGTTGCAGCGTAAGGAACGACCCGAATCCCCCTACTCGCCGCCACCGCCACGTGCCGCATCGCCGCTGGAGAGCGCCAGCGTCATTATGCACTCCTCCGTCTCCGCTGCCTCAACCAATGGCGGCAAAGAGCAGCACAGCAGTGAAATGGAGCACGATGAGCACGACGATGAGCAGGATGAGCACGACGAGCAGGAGCAGAATGATTTTGAGACTAGCGTGCATCGTCTGAAGCGGGAGCGTGCCATGAGCGGCGGCGTGGATGATGATGAGGCACAGGTGCAGTATGCGGCCGATGATAGCCATGATTCCATATTCTAG
- Protein Sequence
- MLRKSSARVQFMARTDWQAGRQPSFCQSGTTVRCRLPIVGGGNGRGSFCPEPEPVQTIGFRSGNWSNVSLKLALKVRKHLASYSPTLLSAAFTSSLNSAYNSSSDTAPDEEPETPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWNNHQTNLVQILHALHEVGSYVDCTLVVDDEQFKAHRVVLAANSPYFQAILQDVPQDQCSIILPGVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDNLMKFNHKAAVAAAAAAAAAGEDRTQSQEFRGSTGGAASYHAAPTSSSSSSSTGHKPQXXXXXXXXXXXXXXXXXXSSSVISTSTHISPSAAISSSCSPPPPPFGNAAYQAAPYTGYPAASSGVPLNINAHIPAGGEAPLTPTHTTPTHHAAGESAAGQWPLSPSAATAAAMLNSVYDSAADMNPLKRKKLSAISSMFFNSTRDTPILRNVLAQANPADSSQPNPLLLPKNSSSSGSGGVEKTPTHQQLAGSGAGAGSVSGAGSHSFNGSDYGGDKEPLSPHTDRSFDDETGVGGGGGSGGGGKKPEWKRYKQYTRADMMCAIQCVREGMSALQASRKFGLPSRTLYDKVRKLNITTGRGTHRTPKRSPPGESSAAFPYSAAAAAAAAAAHNYGQTELDHREAKEHGVTVAGAGAGGPHHGMPPTISHSAAALLDHAFLQQALENRGGDIAGREALHAMALAAAAHAAANRMSSSPPGSNGHAARGGGSPVXXXXXXXXXXXXXXXXXXXXXXXXXXAIIKREAIEDERDADDEDDHDQVEDLSLQRKERPESPYSPPPPRAASPLESASVIMHSSVSAASTNGGKEQHSSEMEHDEHDDEQDEHDEQEQNDFETSVHRLKRERAMSGGVDDDEAQVQYAADDSHDSIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01554788;
- 90% Identity
- iTF_01554788;
- 80% Identity
- iTF_01554788;