Zkol011736.1
Basic Information
- Insect
- Zaprionus kolodkinae
- Gene Symbol
- -
- Assembly
- GCA_018901885.1
- Location
- JAEIFM010000294.1:709228-710526[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1 2.6e+03 -1.3 0.0 20 56 39 78 24 80 0.61 2 2 4.8e-11 1.1e-07 32.0 0.0 12 89 129 196 123 196 0.87
Sequence Information
- Coding Sequence
- ATGAATAATTCTAGAGAACAGCTGCACTGCAGTAGACGTGGATGCAGTTATACCACCAACAGAGCCTACAATCTCGAGAGACATGAACGTAACCATGCCAAAGGCAAGGTGCCAGTGTCACAGTGCCAACCTTGTCCACATTGCACATATGCCGCCGGATCTCTGCACAATTTAATGCGACATATAAGCAAGAAGCACGTAGGAGTCAGTGTGAAAATAAAAGCGAAATGGTCATCTAGTCCGAGACCAGGGCGAAATAAAGAGGAACCACCGGATCCAGATGGTTCAATCCGCCACGCAGAGGGTAAAGAGCAGCAGGAACACCACTTTGGATCGTACTCTTCTCTTTGGGCTTGGAGTTCACCGCAGCAGCAGGAAATAAACTTTATTAGGCGTAGTGGCCTGAATAACGAGTGTGTAATCCACGGCCTAACAATCAAATTGTCCAAACTTTACGCGTTGGTTAAGACCAGAGGAGGAGCCAGTAATGTAGAAGACTGGGATGACATTGCTATAGCTCTGAGATTGCCACCTGAATTTAAACGTACCTTACACTCCAAGTATATGGATATACTTCATAAATTCGAGAAGAAGGAAGAAGAACGAATAGAGGACCAGAAAACAGATGGTTTACCGCCCTGGTGGGATGATGGCAATTACGTTCCAGACATCGACTCTCCGAACTGGAAGGTCGTATGTGCGCAAGAATCGGTCGGCATTGTGGATTTCAAAAGTAACTGA
- Protein Sequence
- MNNSREQLHCSRRGCSYTTNRAYNLERHERNHAKGKVPVSQCQPCPHCTYAAGSLHNLMRHISKKHVGVSVKIKAKWSSSPRPGRNKEEPPDPDGSIRHAEGKEQQEHHFGSYSSLWAWSSPQQQEINFIRRSGLNNECVIHGLTIKLSKLYALVKTRGGASNVEDWDDIAIALRLPPEFKRTLHSKYMDILHKFEKKEEERIEDQKTDGLPPWWDDGNYVPDIDSPNWKVVCAQESVGIVDFKSN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01558814;
- 90% Identity
- -
- 80% Identity
- -