Basic Information

Insect: Zaprionus indianus
Gene Symbol: -
Assembly: GCA_018904595.1
Location: JAEIHA010000897.1:609104-624456[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00012 0.0088 16.3 4.6 1 23 340 362 340 362 0.98

2 7 1.3e-05 0.00095 19.4 5.2 1 23 368 390 368 390 0.98

3 7 2.4e-07 1.7e-05 24.9 0.9 1 23 396 420 396 420 0.99

4 7 1.6e-05 0.0011 19.2 0.7 1 21 432 452 432 453 0.93

5 7 0.15 10 6.7 0.4 2 23 476 498 475 498 0.94

6 7 0.00026 0.019 15.3 2.2 1 20 565 584 565 587 0.94

7 7 0.012 0.88 10.1 0.2 2 20 601 619 600 621 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00012	0.0088	16.3	4.6	1	23	340	362	340	362	0.98
2	7	1.3e-05	0.00095	19.4	5.2	1	23	368	390	368	390	0.98
3	7	2.4e-07	1.7e-05	24.9	0.9	1	23	396	420	396	420	0.99
4	7	1.6e-05	0.0011	19.2	0.7	1	21	432	452	432	453	0.93
5	7	0.15	10	6.7	0.4	2	23	476	498	475	498	0.94
6	7	0.00026	0.019	15.3	2.2	1	20	565	584	565	587	0.94
7	7	0.012	0.88	10.1	0.2	2	20	601	619	600	621	0.94

Sequence Information

Coding Sequence: ATGCATAATATGGATGCAGCTGACTTTTGGCAGCAAGCACGCGCCCCCTTCGCGCACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTTGAACACTGCTATGGAAACGAGGTGTTTGGATCACAGCAGACACTTGCGAGCGCAGCAACCTCCACGCAACTGAGCAGTCACCACTTGCTGTTCAATGCGGCTGCGGCAGCAGCCGCTGCCGCACACCTCAAGTCGACAGCGCGCAGCAACATCTGCATCGAGCCTAATGCCCCAAGTGCAACAAAGCAACAGCAACAGCAGCAATCACAAATTGCTAAAGATTCCCAACAACAGCCCGATCAAGCTTACAGCAGCGAGTACTTTGGGAGCACTGGCAATCCCGAGCATCTGCAGCATCAACAACACCACAAACAACAGCAGCAGGAACCACTCCAGGCGACTCACCCACCGCAAAGCCCGACGCTGGTAGGGCAGGGCCAAGGTCAACTGCCCAGCAGACCATTGTCACAGGGTCAGCAGTCACCACAGCACTCCATAACGCCCTCCGGCGGATGCTCGACTCCCGACATTAAGTACAACAACGAGAAATTAGCCAGCGAAATACAGCTCCAACTCTCCAGGTCGAGCAGCGCGGCGGCAATCAGTGAACGAACCCTTGAAGAATGTTGGTCGACCCTGCAACGACTGTTCATGCACAAGAGCGCCATGCAACAGATTCAACAGCAGATTCCCCGCGTCGGCTTGGGAGTGCATGGGGTGGCCAGCGGCGCTAGCATGGGAGGCGGCACGACGCCCGGGGCAGAGACAAAGCCCCACCAATGCCAACAGTGCATGAAGAGTTTCTCCAGCAACCACCAACTCGTGCAGCACATACGCGTCCACACCGGCGAGAAGCCCTACAAATGCTCCTACTGTGATCGTAGATTTAAGCAGCTTTCCCACGTCCAACAGCACACGCGGCTCCACACTGGTGAGCGACCATACAAATGCCACTTGCCGGACTGCGGTCGAGCTTTTATCCAGCTATCCAACTTACAACAGCATCTGCGTAATCACGACGCGCAGGTGGAACGTGCCAAGAACCGGCCCTTCCATTGCAATATTTGTGGCAAGGGATTTGCTACAGAATCGAGCCTGCGCACACACACATCCAAGGAGCTACAGCTGCATCTCGGTGTCTTACAGCAACACGCCGCACTCATCGGCGGTCCCAATGCAACGTCATGCCCCGTGTGCCACAAGCTTTTTCTGGGTACCGAGGCGCTAATGGACCACATGAAAAACGTACATAAGGAAAAGACTCCACCTCCGTCAGCCTCCACGGCACTTCCAGCCGAGCCGCTTCCCTCTGCATTTAGCGACGCCATCCATACCAGCAGCGGCAGTGCGCCATGCAGCTCCGAATTGAACAGCGCCAACCAGCCATCCACAACCACGAGTGGTTCTAGCCTGAACGAGAGCTACCTTGGCAAGCGGCGGACTGCCAACCATCCGTGTCCCGTCTGCGGCAAGCACTACGTCAACGAGGGCTCGCTTCGCAAGCACTTAGCCTGCCACGCAGAAACCTCCCAGCTGACGAACAGTCTGCGCATGTGGCCTTGCTCTGTCTGCCAAGCGGTCTTTACTCACGAGAATGGCCTCCTCACCCACATGGACCATATGCGGATGGACCCCAAACACCAGTTCGCGGCACAGTACGTGCTGTCTCGCGCGGCGGCTGAACAACGCGAACGTGAATCTCTTTTGGCAGCGACACTGGTCGCTACATCCACGGGAAACGGGGTGAGGGACTCGACGTGCATGCTTCCGCTGGGCGTGGGAAGCGTTCTGACTACAGGCGGTGGCTCCAACTCGTTGTGCCCATCGCCGTCAGCGAACTCAGAGTGTTCCTCCAATGGCCGTCTGTCATCATCTTCCACTTCCGACCAGGAGCCGGACCAAGATCAGGAACAGGATGCGGATCAGGGCTTGAGCGAGAATGAGAACAGTAGCCACAACAATAACATAAACAACGTGAACAACAACAACAACAGAATGAATATTAACAACAACAACTGCTCGGACAAACTGCACCTGAGCGAGCTGCGGCTACCCAGTTCAGTTACCAGTCAATATAGTATAGACGCGGAGCTTCACGCCAATCGCATGTCCCTTATGGCTGCCGCGTCGGCAGCTGCAGCCGCTGTGGCGGCCTCCGCAGGCTCTCGCTCCCAAGATAGTTCCCTCACAGACGCCGTCTCTAGCGGTGCCGGGAATGCCGCCGTCCAGGCGGCGGTGGTAAACAGTCTGGCAGCCGCAATGCGCTTGAACAATCCCAACAACCCGCATCAGCAGCAGGTGAATATTTCTTGGACATTAAAGAACTTTCTTTGA
Protein Sequence: MHNMDAADFWQQARAPFAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEHCYGNEVFGSQQTLASAATSTQLSSHHLLFNAAAAAAAAAHLKSTARSNICIEPNAPSATKQQQQQQSQIAKDSQQQPDQAYSSEYFGSTGNPEHLQHQQHHKQQQQEPLQATHPPQSPTLVGQGQGQLPSRPLSQGQQSPQHSITPSGGCSTPDIKYNNEKLASEIQLQLSRSSSAAAISERTLEECWSTLQRLFMHKSAMQQIQQQIPRVGLGVHGVASGASMGGGTTPGAETKPHQCQQCMKSFSSNHQLVQHIRVHTGEKPYKCSYCDRRFKQLSHVQQHTRLHTGERPYKCHLPDCGRAFIQLSNLQQHLRNHDAQVERAKNRPFHCNICGKGFATESSLRTHTSKELQLHLGVLQQHAALIGGPNATSCPVCHKLFLGTEALMDHMKNVHKEKTPPPSASTALPAEPLPSAFSDAIHTSSGSAPCSSELNSANQPSTTTSGSSLNESYLGKRRTANHPCPVCGKHYVNEGSLRKHLACHAETSQLTNSLRMWPCSVCQAVFTHENGLLTHMDHMRMDPKHQFAAQYVLSRAAAEQRERESLLAATLVATSTGNGVRDSTCMLPLGVGSVLTTGGGSNSLCPSPSANSECSSNGRLSSSSTSDQEPDQDQEQDADQGLSENENSSHNNNINNVNNNNNRMNINNNNCSDKLHLSELRLPSSVTSQYSIDAELHANRMSLMAAASAAAAAVAASAGSRSQDSSLTDAVSSGAGNAAVQAAVVNSLAAAMRLNNPNNPHQQQVNISWTLKNFL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01552666; iTF_01554925;
90% Identity: iTF_01552666;
80% Identity: -