Basic Information

Insect: Zaprionus indianus
Gene Symbol: -
Assembly: GCA_018904595.1
Location: JAEIHA010000709.1:5810435-5814455[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.081 5.8 7.5 5.6 2 23 349 371 348 371 0.96

2 18 4.4 3.1e+02 2.0 0.2 1 23 378 403 378 403 0.92

3 18 0.11 8.1 7.0 4.2 3 23 415 435 414 435 0.93

4 18 5.1 3.6e+02 1.8 3.0 2 17 446 461 445 472 0.75

5 18 0.023 1.6 9.2 0.3 3 23 505 525 503 525 0.95

6 18 0.00015 0.011 16.1 0.3 1 23 533 556 533 556 0.98

7 18 0.00036 0.025 14.9 0.3 2 23 561 582 560 582 0.97

8 18 4.5 3.2e+02 2.0 0.2 1 19 590 608 590 610 0.84

9 18 0.00062 0.044 14.1 0.4 1 22 630 651 630 654 0.90

10 18 0.82 58 4.3 0.5 3 21 661 679 661 680 0.90

11 18 0.014 0.98 9.9 0.7 1 23 699 724 699 724 0.96

12 18 0.011 0.75 10.3 1.4 2 23 740 762 739 762 0.93

13 18 0.0056 0.39 11.1 0.4 2 23 768 790 767 790 0.92

14 18 0.044 3.1 8.3 0.2 2 23 794 816 793 816 0.95

15 18 8.4e-06 0.0006 20.0 2.5 1 23 822 844 822 844 0.99

16 18 0.036 2.6 8.6 0.9 1 23 848 871 848 871 0.93

17 18 1.3e-05 0.00095 19.4 0.7 1 23 877 900 877 900 0.96

18 18 0.0032 0.22 11.9 0.4 1 23 904 932 904 932 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.081	5.8	7.5	5.6	2	23	349	371	348	371	0.96
2	18	4.4	3.1e+02	2.0	0.2	1	23	378	403	378	403	0.92
3	18	0.11	8.1	7.0	4.2	3	23	415	435	414	435	0.93
4	18	5.1	3.6e+02	1.8	3.0	2	17	446	461	445	472	0.75
5	18	0.023	1.6	9.2	0.3	3	23	505	525	503	525	0.95
6	18	0.00015	0.011	16.1	0.3	1	23	533	556	533	556	0.98
7	18	0.00036	0.025	14.9	0.3	2	23	561	582	560	582	0.97
8	18	4.5	3.2e+02	2.0	0.2	1	19	590	608	590	610	0.84
9	18	0.00062	0.044	14.1	0.4	1	22	630	651	630	654	0.90
10	18	0.82	58	4.3	0.5	3	21	661	679	661	680	0.90
11	18	0.014	0.98	9.9	0.7	1	23	699	724	699	724	0.96
12	18	0.011	0.75	10.3	1.4	2	23	740	762	739	762	0.93
13	18	0.0056	0.39	11.1	0.4	2	23	768	790	767	790	0.92
14	18	0.044	3.1	8.3	0.2	2	23	794	816	793	816	0.95
15	18	8.4e-06	0.0006	20.0	2.5	1	23	822	844	822	844	0.99
16	18	0.036	2.6	8.6	0.9	1	23	848	871	848	871	0.93
17	18	1.3e-05	0.00095	19.4	0.7	1	23	877	900	877	900	0.96
18	18	0.0032	0.22	11.9	0.4	1	23	904	932	904	932	0.89

Sequence Information

Coding Sequence: ATGTCGGAAAATTTGAAAATAAATAGCGAAACTGGGCCTAGCTGCCTGCATTGCAGAGTGCACAATTCAAAACAACCGTATCAGGAGATATTCGATGAGGTGGGCGTGGAAATTGAACTGGCCGATCTGCTGGCCAAATATTTTCAGATAAATGTCAAACCCGACCCACAAAAGCCGCAACTGCTGTGCCAGGAGTGCGTCAAGACGCTAATTCGCTTCTTTGACATCGACGAACTGCAGCGGGAACAGGATGCAGCTACCAAAGGGGCGACACAAGCTAGAGCAGACCCTGCATCTGTGGCGACGCCCGTTGCCAAGAAGGAAGCAAAGACACCCGTTAAAAAACAGACGCCGCCGGGTACAAAAACAATTGTTGAGCCAAAAACATTGCCAGTTGTGTCCAAAAAGTTGTTGCCTCCAGCCGATTTGCAGCCCACAAAGTCGGGCCCAGGTGTAACTCCAACACAAGCAATTTCCATACGCATAACCAGGGCAAAATCTCAAGCTACGACACCAAAACGTTTGCAGATTACACCCAAGGGAAAAGCTGGTGAAACTGCTGCGGGAAAAGGTAGGAAACCAAGGGAAGGCGAACAGGAGCAGATTAGTGCTTTGATACGTGACATACTCGACGACGAGGAGTCGCCGCACGATGAGAAATTCGCTGAGGCAGCTGCCACAGTGCGACAACTGGAGACACAGGCTGGCGAGGAGCAAGAGCCAGAACAAGAGCAGGAGGCAGTTACCGAGGAGTTGCATGAGCAGCAGCAGCAAGAGCCCGAAAATGGAGACGAGTTGGAGTTCTTAGTTGAGCAAGATGATGATTCGTCTGAATCTGAACAGCGCCAGTTTAAAGTGGTTAAGAAGGCATACCCCGAGGATTCGCAGTCGGCAAACGAAACGCAGAGTGAGGATGAGTCCCTGAAAGTAGAACCATTTAATTTCGTGTTGATCAAGGAATCGGATGGCATTGACGACTTGATGGAGTACCTGGGAACCGTGGTGAAGACTTGCTTCGAGACTCTCACCTTCGATTGGGCCACTGTGTGCCGGCACTGCTCATTGAAATGCAGTAAATACGAGAACTTGCTGAACCACATGCTCAAACGTCATCAGCTGCCGGAGAAGCGCTTCAAGTGTCCCATAGACGGTTGCACAGCAGAACTAAAAGGTTGCAAATATTTGGCCATGCACTTGGTTGTGCTGCATGCGCCAGTGGCAGACATTCCCATATATGGCTGTTGTCCAGAGTGCAACATGACCTTCTCCAACATATTGCAGTATAATAAGCATTCCTGCGCCCATGTAATCAAGAAGCGTCGTGGCATACGCTTGTACTGCGAGATGTGTGGCTTGGAATTCCCCTCCTGGAAGCGTTTCAATTTCCACAATCAATTCCATCTGGAGAGACACAGGCCACGCGCCTGTTTCGTATGCAACTATGCGAACAACAACATTGACGATCTCTTCCAGCATTTGCACTACTCCCACGAACCCGAGGGCACGCTCTTCTGCGATCTCTGTGATCGCAATTTCCGTGATGCAGCCGTTTTTATGGAGCACAATAAGTCGCACGCCAACGTCAGCAGCACCACTTACACCTGCAGCGAGTGCAATGCCAACTTCGATACACGTGGACGCCTTAACGGTCATATGCGTTCCATTCATGGCAGCATCATTAGCTGCGAGTTGTGCAGCCGCGAGTTCGCCACAGAGGCCACCTTCAACATCCACATGAAGAAGCACTTGATTATCGAGCGCGAGGTGCACGTTTGCAATAACTGCGGCATGCTCAGTGAGAATCATGATAAGATGTTGGCACATGTGGACAACGAGGAATCGGCTTGCTTTGGCGTCGATATCTACGTTGAACTGCTGCGTGATGCCTACATCTGCGAATACTGCTCGGCATACTTCAAGCAGAAGACCGATCTACGTGCCCATCGCGATTCAGGCGTGCACAAGAATGGCATGTTCTGGTGCCAACCGTGTGAGAAGGAGTTTGCGGACATGAAACTCTATCGGCATCATCTGCGTAACTATCAGCTACAGCGTGCCGATGTGGATCATCGTAAACTAGAAATTTGTCTCTACTTTATGTGCGACTTTGAGGATTGCCTCGAATCGTACATAAATTGGAATTCGTTGTACACGCACAAGCGGCGCACACACGATGCAGCCGAGAAAATGGAAGCCAAGACGAAAGAGGGTGAATGGATCTGTCAGTTCTGCCAGAAGGTGTGTCGCTCCAAGATGTCACTATCAGTGCATGTGGCAAGAAGTCACAACAATAACAATGTGGTCTGTTCGCTGTGCAAGGCCTCGTACAAGGATGAGGAGGCGCTGAAGAAGCATCATGCATACTGGCACGAGCCTATGGAGTGTGCGCTGTGCTTGAAGATCGTCAAGAATCGCCGTAACTTCGACACGCACATGAATGTGGTGCACTCGAATAACAAGCGCTACAAGTGCTCCGTCTGCCAAAAGGGATTCTACCACAAGAGCGAAATGGAGGCGCATCAGCGGCTGCATAACCAACTCTACAGCTGCGAGCAGTGCAGCTTCCAGACACGCAACAAGAAGTCATTGTCGGTGCATGTGCTCGGCCAGCATTACAAACGTTTCGCCTTCGCGTGTAAGGTGTGTGACAAACGTTTCGGGCGCCGCCAGGGACTATCGAACCACATGCAACGTGTCCATGGTTCGAAGTACACGTGCCGTGACTTCTTCGATGGCGGTTGCAGCAAGTCCTTTGGATCAACCACACAGCTTAATGTGCATGTGCGTAAGGTGCACAACGGCAGCATCTTGTTCGACGATGATAACGATAACGACAAGGCTGATGAGGAGCAGGAAGATCAACAGGAGGAGGAGGAGGAGGAGGAGGAAGCGGATGGAGAAGTCGAAGCGGAGCAAAAAGAGGAACAAAATGCTGCAGGACCATCGACATCGAGAAAACGTTGCATTCGCATCAACGATGATACCCAAATTGAGTTCATTGGTGGCGAAGAAATCGAAGACGAAGTAGAAATGCTTGAGGAGATTCAGGAGTTGAAGAACGAGCGTAAAGCACCCCCAAAGAAGAAGCAGCGACGAGCTTAA
Protein Sequence: MSENLKINSETGPSCLHCRVHNSKQPYQEIFDEVGVEIELADLLAKYFQINVKPDPQKPQLLCQECVKTLIRFFDIDELQREQDAATKGATQARADPASVATPVAKKEAKTPVKKQTPPGTKTIVEPKTLPVVSKKLLPPADLQPTKSGPGVTPTQAISIRITRAKSQATTPKRLQITPKGKAGETAAGKGRKPREGEQEQISALIRDILDDEESPHDEKFAEAAATVRQLETQAGEEQEPEQEQEAVTEELHEQQQQEPENGDELEFLVEQDDDSSESEQRQFKVVKKAYPEDSQSANETQSEDESLKVEPFNFVLIKESDGIDDLMEYLGTVVKTCFETLTFDWATVCRHCSLKCSKYENLLNHMLKRHQLPEKRFKCPIDGCTAELKGCKYLAMHLVVLHAPVADIPIYGCCPECNMTFSNILQYNKHSCAHVIKKRRGIRLYCEMCGLEFPSWKRFNFHNQFHLERHRPRACFVCNYANNNIDDLFQHLHYSHEPEGTLFCDLCDRNFRDAAVFMEHNKSHANVSSTTYTCSECNANFDTRGRLNGHMRSIHGSIISCELCSREFATEATFNIHMKKHLIIEREVHVCNNCGMLSENHDKMLAHVDNEESACFGVDIYVELLRDAYICEYCSAYFKQKTDLRAHRDSGVHKNGMFWCQPCEKEFADMKLYRHHLRNYQLQRADVDHRKLEICLYFMCDFEDCLESYINWNSLYTHKRRTHDAAEKMEAKTKEGEWICQFCQKVCRSKMSLSVHVARSHNNNNVVCSLCKASYKDEEALKKHHAYWHEPMECALCLKIVKNRRNFDTHMNVVHSNNKRYKCSVCQKGFYHKSEMEAHQRLHNQLYSCEQCSFQTRNKKSLSVHVLGQHYKRFAFACKVCDKRFGRRQGLSNHMQRVHGSKYTCRDFFDGGCSKSFGSTTQLNVHVRKVHNGSILFDDDNDNDKADEEQEDQQEEEEEEEEADGEVEAEQKEEQNAAGPSTSRKRCIRINDDTQIEFIGGEEIEDEVEMLEEIQELKNERKAPPKKKQRRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01559910;
90% Identity: iTF_01550457;
80% Identity: -