Basic Information

Insect: Zaprionus indianus
Gene Symbol: -
Assembly: GCA_018904595.1
Location: JAEIHA010000140.1:6230486-6233110[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.066 4.7 7.8 5.9 3 23 266 286 264 286 0.96

2 12 0.01 0.73 10.3 0.4 1 23 292 317 292 317 0.92

3 12 0.0023 0.16 12.4 1.1 1 23 324 349 324 349 0.96

4 12 0.00024 0.017 15.4 2.0 1 23 361 383 361 383 0.98

5 12 2.3e-06 0.00016 21.8 0.2 1 23 390 412 390 412 0.98

6 12 0.0065 0.46 10.9 0.1 1 23 418 440 418 440 0.98

7 12 0.02 1.4 9.4 3.9 1 23 446 469 446 469 0.97

8 12 0.0085 0.61 10.6 3.9 1 23 475 497 475 497 0.96

9 12 0.00014 0.01 16.1 3.6 2 23 504 525 503 525 0.96

10 12 3.8e-05 0.0027 18.0 0.3 1 23 647 670 647 670 0.96

11 12 0.01 0.71 10.3 1.2 1 19 676 694 676 698 0.94

12 12 1.7e-06 0.00012 22.2 4.1 1 23 704 726 704 726 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.066	4.7	7.8	5.9	3	23	266	286	264	286	0.96
2	12	0.01	0.73	10.3	0.4	1	23	292	317	292	317	0.92
3	12	0.0023	0.16	12.4	1.1	1	23	324	349	324	349	0.96
4	12	0.00024	0.017	15.4	2.0	1	23	361	383	361	383	0.98
5	12	2.3e-06	0.00016	21.8	0.2	1	23	390	412	390	412	0.98
6	12	0.0065	0.46	10.9	0.1	1	23	418	440	418	440	0.98
7	12	0.02	1.4	9.4	3.9	1	23	446	469	446	469	0.97
8	12	0.0085	0.61	10.6	3.9	1	23	475	497	475	497	0.96
9	12	0.00014	0.01	16.1	3.6	2	23	504	525	503	525	0.96
10	12	3.8e-05	0.0027	18.0	0.3	1	23	647	670	647	670	0.96
11	12	0.01	0.71	10.3	1.2	1	19	676	694	676	698	0.94
12	12	1.7e-06	0.00012	22.2	4.1	1	23	704	726	704	726	0.99

Sequence Information

Coding Sequence: ATGTATGAAGGGAGTGAATACTCCATTCACACAATATGTCGGATCTGTTTGAATCACCTGCAAAACGATGCAGCCTACGACCTGTTCCTGGTACCGGGTCTGGCCAAGAAACTGTGTGTCTGCACCTCGCTGTCGGTGGAACAGCAGGACGGTTTTCCAACAAATCTGTGCACCCAATGTTACAGCCGGCTAAACGACCTGCATGACTTTCAGAAGCTGTGCGTGGACTCGGTACAAAAATTCCAGGAGATGGTCGCCAATAATTTCCTAACAAAATCGGGAACAGCTGTTCGCATTAATCAAGTCGACAATTTCGATGTGCTAAATGTGTCGGCACCTGACGGAGATTTGGTTGCCGAGGAAGAGGAGCGTATCAACTATGATCCTCTCCTTAATCACAAAATGGAGATTATAGAGAACGAAGAGGATGTCTTCAAAATGCTAGAACATTGCGACAAGGAGGCTGAGGAAGTTGAAAAGGAAGTTAAGCATGATGTGGAGGATCAAGGCGGAATATTGCCAATGTTTGACGATGATTCCTCTGTGGAAAGTAGCAATGAAAACGACAACGATTTGGACTTCGAACCAAACAGTAGTGACGGTGATGACGACATGCCGCTGGCGCAACGTCTGCGAGCAAATCCAAAAACAGGCAGAAATTCAAAAGCCAATAAGACTTCTGCAGATGACGATGATGAGGACTTCAGCTCAGGATCCGACGAGGAAGGAACGAAATCAAAGACTAAGCGGAAGCGAATTCCTGCAGCTGAGCGGCACCTTCATCGCATCATTGATTGCCACATCTGCCATCAGAAATTCAAGAAGGCCATACGCTATGAGGAGCACATGAAACACCACAACGATCTGCTGCCGTTCCAGTGCAAAGTGGAGAGCTGTCGCAAGGGATTCACAACGGCGGGTGGTTTGCGTCTGCATGTGGATCATGCACATACGGAACTCTCGGAAGTGCACACTTGCAGTGTAGAGGGTTGTGGCAAGACTTTCCCTAGAATTCGTTTGCTTACCTTCCATATGAAAAAGGTACACAACATCTCCAAGGCGGCGGCACCTCCAAGAGATTACCCCTGCACAGAGTGTGAGAAGGTGTTCCGTTGCCCCATGGCCCTCAAAAAGCACATGTACAAGCACGATGGCAAGGAGCTCCCATTTCCCTGCAACATCTGTGGCAAACGATTTGTGATTAATAGCGCTCTTAAGGATCATCTGATGCGACATGCGGGCATAAAGAACTATGTGTGTCCCTACTGTGGTGTGGGCAAGACAACGCGACAGGAATGGAACACACACATTCTAACACACACGCAGGAGAAGAAATTCAAGTGTCATATATGTGAGCACGCATCCCACAACAAACAAAGTTTGGCCAATCACGTCAAGATTGTACACGAGAAGATCAAGAACTATGCGTGTCAATATTGTGGCAAGACATTTGGTAAGTCGCATGCCTGCAAGATACACGAGATGACGCACACGGGGGAGAAACGATGCGAGTGCAAGGTCTGTGGCAAGAAGTTCCTCTACCCCAAGAGCCTAACGAAGCATTTGAAGACACACGAGAAGCGTGTACTACGCGCCATCGAGACGTATCGCCAGCGGCAAGTTGAGCTTGGTGAGGGTGCCTCAGGTACGCCAAGCGAGCCACAGGAGATATCGACAATAACTAATGCGGCTGTGACAGGAGGAGCCCCAGCAACAACTTCAGCAACAGCCGATGGCGTCGAAGTGATCATGTCCCAAAACGCAGCCGATGAGTTGCTGAAAGTGTGCGCTGAATCGGTGGCCACTATACCTAAGGATCCAAGACGAGTACAACGTGTAGATATCGCACAACTAGCTGGCACAGCTGTGAATCCGATACCATCTGTATCGGTGCCTTCTTGGTCGCCTCAAGTTAACTTCACGAAGAAGGAAGGCAAACACATTTGCCCCGGCTGTGGTCAGGGATTCAATAACATCGGCAACATGAAGCGTCATTATAAGATCATTCACGAGAAGGTGAAAGATTTCGCATGTCGTTTTTGTCCCAAAAGATTCGCAAAGGCGCAAACTTTGCGGCATCACGAATGGATACACACTGGGGAAAAGCCATTCGAGTGTAAGACTTGCGGCACACACTTCCGCCAGGAGACAGCGCTCAAACGTCATCAGAGAACACACGAGAATCGCCCACCAGTAATATCATCCAAGTTCTATGCAGCGCGCGAGGAACTGGAGGAACAGGAGCGAACGAAACGCGAGGCCAGGCGCAAAGCGGAAGCGAAACGTAAGGAAATTGCAGAGGCAGCAAAGGAGCAGCTCTCCTCACTGCATAAAATCGAAGCCACCGATAAGAATCTTCATTCGTACGACGAGTATCAGGAAGCTGCAGCTGAGCGTGCAGCAGCATCAGCTGAGCTGCAGGCACAGCAGTTCGAGGAGAACGAAGTGAAGCGCAGAGCAGACATGGAGAGATTGAAGATACAAGAGGCAGCCTATGAACAGTTGCAGAAACTGCAGCAACAGCAGGAAATCGAAAAGGCGCAAAGCTCCTACGATGGTTACTATGCACAAAAGGCGCATGCTGAGGGCTCCACACTCGATGATCTTAAGATCGATCATGTCTAA
Protein Sequence: MYEGSEYSIHTICRICLNHLQNDAAYDLFLVPGLAKKLCVCTSLSVEQQDGFPTNLCTQCYSRLNDLHDFQKLCVDSVQKFQEMVANNFLTKSGTAVRINQVDNFDVLNVSAPDGDLVAEEEERINYDPLLNHKMEIIENEEDVFKMLEHCDKEAEEVEKEVKHDVEDQGGILPMFDDDSSVESSNENDNDLDFEPNSSDGDDDMPLAQRLRANPKTGRNSKANKTSADDDDEDFSSGSDEEGTKSKTKRKRIPAAERHLHRIIDCHICHQKFKKAIRYEEHMKHHNDLLPFQCKVESCRKGFTTAGGLRLHVDHAHTELSEVHTCSVEGCGKTFPRIRLLTFHMKKVHNISKAAAPPRDYPCTECEKVFRCPMALKKHMYKHDGKELPFPCNICGKRFVINSALKDHLMRHAGIKNYVCPYCGVGKTTRQEWNTHILTHTQEKKFKCHICEHASHNKQSLANHVKIVHEKIKNYACQYCGKTFGKSHACKIHEMTHTGEKRCECKVCGKKFLYPKSLTKHLKTHEKRVLRAIETYRQRQVELGEGASGTPSEPQEISTITNAAVTGGAPATTSATADGVEVIMSQNAADELLKVCAESVATIPKDPRRVQRVDIAQLAGTAVNPIPSVSVPSWSPQVNFTKKEGKHICPGCGQGFNNIGNMKRHYKIIHEKVKDFACRFCPKRFAKAQTLRHHEWIHTGEKPFECKTCGTHFRQETALKRHQRTHENRPPVISSKFYAAREELEEQERTKREARRKAEAKRKEIAEAAKEQLSSLHKIEATDKNLHSYDEYQEAAAERAAASAELQAQQFEENEVKRRADMERLKIQEAAYEQLQKLQQQQEIEKAQSSYDGYYAQKAHAEGSTLDDLKIDHV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00575777;
90% Identity: iTF_01554862;
80% Identity: -