Zind013801.1
Basic Information
- Insect
- Zaprionus indianus
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018904595.1
- Location
- JAEIHA010000938.1:137800-150964[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.37 8.7e+02 -0.4 0.2 16 39 274 297 270 301 0.82 2 2 4e-19 9.4e-16 57.1 0.0 1 43 539 582 539 584 0.95
Sequence Information
- Coding Sequence
- ATGGCCGACAGTTCGAGCCTAGAACGTGTCGCTGAGGAATTAATGGGTCGCAGGAAATGGAAACATTATCAAGATCAAGTGACGCGCAATCAATTGAATATTGCCGAGCAACAGCCCATATCGATAACGCAAGAGAGCGAAGAGGACGCTCAGAAGAGCGAACACTACAAACCAACACTGAACCACCGTTTAGAGCAGCCCAACGGCAACAGCAACAGCAACAGCAACAACAACCAGGGCTTACTGCAATTTGAAAGAGATTTTGACAAGCAGCAAACATCACAGGAACACGACTCAAGTGCAACATCACGTAGCTCAGGCTCACCTTCACCACCACCGCCAGAACCCAACGATTGGATACCGTCTGATAAGTGCAATTTCTGTATTAACGGTCGCCTGCTAACGGTGAACGCCCAAGGCGAATTGGTGGCCGAAACAACAACAACAACAGCAACACACAACAGCAACATTTACAGCGGCATTGCTGTGCAGCAGTTCACCATGATGACCGACTTCAATCTGATTAGCACGCTGGCCAATCAACAGCAACAGCAGCAACAACAACAACAGCAACACCATACTAACTCGGTAACGCCATCTACCTCAGATGTATCTGCAGTCGTCGCTGCCGCTGCCACGGCAAGTCCCACACTGAAAGATACTCCCAGTCCCAGTGCAGATGCGCCCCTGGATCTGAGCAGCAAACCATCGCCAAATTCATCCATAAGCGGCGACAGCAAGACAGTCAGACTCTCGGACTGCGGCGCGTCCGTGGCAGCGTCAGCCACGCGCTGCATCAGCGAGCCACTGTCCAAGCACAAGCTTGGCGGCCGGCGTGCATCGGGCTATTACCAAGGTGCGCGCTCGACGATGCTGCGCAGCAAGCAGTGCAAGTTGTCGTCGCCCGAACTGAAGCGAACGCCACAGCACGAGCTGCAGCAGGAGCACGACGGTGCCAGTTCAGGGCTGGGAGCAGAGGAGCACGACGAGTCGGGCGATGAGGTTGGCGATGGCGATAGCAATGCATCGACGCCGGCATCGACAGGCTTTCAGGAGTTGGCCCAACACATTGCGGCCAGCGAGCAACTGCGCAAGCTAAGCGGCATGTCCGAGCACAATGGCAGCGAGCTGGGCGACGATCTGGAGTCGGGTCAGATGTCGCCCAAGCTGATGCGACCACAGAGCACAGGCACACCCACGTCGGGCGCTGCCGGGCTCCAGGGAGCGACAGCGGCGGCGGTGGCAGCCAGCGCTGCAGGATTTCCCATGCACATCGATACGAATGTGTTGCTGCAAACGTTGCTGCTGGCGACGGGCATCGTTATGCCCAATCCCGATGATACACAGCGACTGGGAGATCTGATCAAGACACTGATACTGGCGAACAGTGGAGGCATCCTGAATGACAGACTTAAGCCAAGCATTTCAGTGGCCAAAATCATTGGCGGCACTGACACGTCACGCTTTGGCGCCTCACCCAATCTGCTCGCGCAGCAGCATCACAGTCATCTGCCGCCCTCGCACCATCAGCAGCAGCAGTTGAGTGCACAGGATGCTGCCGCACTGGCCGCTGGCAAGGGAACGCGACCGAAGCGCGGCAAGTACCGCAACTACGATCGGGACAGTCTTGTGGAGGCAGTGAAGGCGGTGCAGCGTGGCGAGATGTCGGTGCATCGTGCTGGCAGCTACTACGGCGTGCCGCACTCCACTCTGGAGTACAAGGTGAAGGAGCGTCATCTGATGCGGCCGCGCAAGCGTGAGCCGAAACCTCAACCGGATCTCCCGAGCATGTTCTGGGCGCAGCCCAATGCGGGCGCCAACTACGCGCTGGACTTCAATCGCAATCCCGAATTCCTTAAGTCGCACCTGGCCGAGGTGATGCGCAGCAGTCCGCTGGCCAATCATCATGCCGGGCATGCCGGCTCTGCCGCGGCAGCGGGTGGCATGAAGAGTGCGCTGGAGTTCACCGAGAATATGTACGATGGCATCATTCGCAAGACGCTCAACAGCGACGGCGACTTGGGGGGCGGGCCGAGCAGCGGCACGGGCAATGGCAATGCGCTGCTGGATCAGCTGCTGGTGAAGAAGACGCCGCTGCCGTTTACCAATAATCGCAGCAACGATTATCTGGCTGCTGCCACCTGCTCTGAGGGTGTCAAGCGGCCGGGCAGTCCGGGCACCTATGCGGACATCAAGCGCGAGCGGCTCAAGCTGCTGCAGCAGCAGCACGAACCAGCAGCGACGTCCACGACGGCCAGTTCGATACTGCACGAGAAGCTGGCGCAGATCAAGGCCGAGCAGAGCGACTATGCGGCCAGCGATGAGCAGTTATAG
- Protein Sequence
- MADSSSLERVAEELMGRRKWKHYQDQVTRNQLNIAEQQPISITQESEEDAQKSEHYKPTLNHRLEQPNGNSNSNSNNNQGLLQFERDFDKQQTSQEHDSSATSRSSGSPSPPPPEPNDWIPSDKCNFCINGRLLTVNAQGELVAETTTTTATHNSNIYSGIAVQQFTMMTDFNLISTLANQQQQQQQQQQQHHTNSVTPSTSDVSAVVAAAATASPTLKDTPSPSADAPLDLSSKPSPNSSISGDSKTVRLSDCGASVAASATRCISEPLSKHKLGGRRASGYYQGARSTMLRSKQCKLSSPELKRTPQHELQQEHDGASSGLGAEEHDESGDEVGDGDSNASTPASTGFQELAQHIAASEQLRKLSGMSEHNGSELGDDLESGQMSPKLMRPQSTGTPTSGAAGLQGATAAAVAASAAGFPMHIDTNVLLQTLLLATGIVMPNPDDTQRLGDLIKTLILANSGGILNDRLKPSISVAKIIGGTDTSRFGASPNLLAQQHHSHLPPSHHQQQQLSAQDAAALAAGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLPSMFWAQPNAGANYALDFNRNPEFLKSHLAEVMRSSPLANHHAGHAGSAAAAGGMKSALEFTENMYDGIIRKTLNSDGDLGGGPSSGTGNGNALLDQLLVKKTPLPFTNNRSNDYLAAATCSEGVKRPGSPGTYADIKRERLKLLQQQHEPAATSTTASSILHEKLAQIKAEQSDYAASDEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -