Basic Information

Insect: Zaprionus ghesquierei
Gene Symbol: -
Assembly: GCA_018904095.1
Location: JAEIGP010000103.1:3798891-3801164[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 2.6e-05 0.0018 18.5 2.5 1 23 414 436 414 436 0.97

2 7 2.2e-05 0.0015 18.7 0.4 1 23 442 465 442 465 0.98

3 7 0.019 1.3 9.4 0.7 1 23 471 494 471 494 0.92

4 7 1.7e-05 0.0012 19.0 0.9 1 23 528 550 528 550 0.95

5 7 0.00019 0.013 15.7 2.2 1 23 556 578 556 578 0.98

6 7 9.7e-05 0.0067 16.7 0.8 1 23 584 606 584 606 0.98

7 7 0.0011 0.073 13.4 2.7 1 22 612 633 612 636 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	2.6e-05	0.0018	18.5	2.5	1	23	414	436	414	436	0.97
2	7	2.2e-05	0.0015	18.7	0.4	1	23	442	465	442	465	0.98
3	7	0.019	1.3	9.4	0.7	1	23	471	494	471	494	0.92
4	7	1.7e-05	0.0012	19.0	0.9	1	23	528	550	528	550	0.95
5	7	0.00019	0.013	15.7	2.2	1	23	556	578	556	578	0.98
6	7	9.7e-05	0.0067	16.7	0.8	1	23	584	606	584	606	0.98
7	7	0.0011	0.073	13.4	2.7	1	22	612	633	612	636	0.91

Sequence Information

Coding Sequence: ATGAAGTGCGCGGTGCATAACTGCGCCAACAAATTTAAGGCGAAAAAAAAACATTCGCAACAATTTAGTTTTTTTAGCTTTCCCAAAAACCCAGATATTTTAAAAGAATGGATTTCATTTTGCCGAAAGCACAACAAAGATAAACAAAGGAAAACCTACCAGAAGAGTGTCATTTGCAACGAGCACTTCAATGATGAGGACATCCAGGGGGGCTTGCAATTTCAAATGGGACTCTGTACGAAGAGAACGCTCCGGCCCGGCGCAATACCATGCATTAATAAAAACAATATAAGCTTAGCTGAACGGGAGCGTTCAGAGAAACGTAAGAACCAGAAACTGGTTGCCGAACTGCTAGAAGAAGCAGCTGTGCGTGAGGAAGCTGAAGCCAATGGGGCAATTGTTGTTGCCCCAGGATTTGTCCGTAATACTGGCATAGTCTCTGTTCCTGATTTTGTTAGCGCCACCGGAAATGCCTTCGATCCATCTTCGCATGTGCCCGGTGAGAATGATCCTTTGGCCGAGGAACTGGAGGAGATGCATGCTTCCACAAAAATCATTGAGAGAGTTCCAACTCCTAATGAGCAAAAGAAATGTCGCACATGCTATCGACAGTTTGTGATAGATGAAAAGGCGAAAGATCTCTGTGAAGAACAAAACGCGGTCATGCTGTATCATATTGAAGTAATTACCGGAATATGGATCCAATGCCAATCAGAGACCTATCAGTTTATGTGCCCAACTTGTGTTGATAACTTACGCATTGCCATCGAATTTCGAGAAACATGTATACAGACTGAACTGCAACTTGCTGGTGGCGATAACCTACCGATTCAAACCGACGATGAAGTATTCGAGGTGGAGCCCCAAGCGAAAAATGAAAATGATATCAAGGATGATTTCGTTTCCGTATTTCCCGCAGATAAAGAGAACGGTTCAACAATTGTAGTCGAATCTTTGTCAACTGCAAGAACAAATCAAATTATTCAAGGATTACATCCAGCGGCTGCAGATCCAAATAGTATAGCATTGGGTGCACAAATCTATGAGGATCTTCTTAATGAATATAAGGGTAACGAAAAAACAATTCGACCTAAAACACGACATATACCAGTCATAAGGGGAGAGAAGAAAAAACCAAAGCGGCCAAGACCTTCAGAGCCAAAACCCAAACGGGAGAAACGCAGCAGAGAAGAGAAAAATCGAATACGTCGCGAACATATCAGAGCCTTGCCGCTGAATCATGTGTGCGATCAGTGTGGCGCATCGTTTCGTGTCAGGTGTAACCTTACCATACATATGCTGCGTCACACACAGACAAAAAACTTTAAATGTCCCGAATGTCCCAAGCAGTTCTATGATGCCTATATGCGAAATATTCACATACGAGTCCGTCATCGAGGCGAACGGCCCTTTGTATGCAATTACTGTCCGAAGGCATATGGCTCATCCAATACACGTTATCTGCATGAAAAAAAAGTACATGGAGCAGGACCGAGGATACACAGAAACTTGAATAAAGTAAACCAAAAGCTTGAGATAAAGAAAAACCAAGAGCTGGGTGAGTCCCGGGAAAATGTCCGTCATTTTTGTGAATACTGCGATAAAAGTTATGCAACAAAATATGCTCTAAATGGACATATAAATGCGCACATGGGCGTAAAACCTTACAAGTGCAAACTGTGCGACATGAGATTTTCAGATCCGCAATCGAAAAAGAAGCATGAAATGCGACACGATAGTAAACGTCCATTCGAATGTGACATTTGTTTGAAAGGATTCTATACACGAACCAAACTAAAAGAGCATGAGCGAATTCACACCGGCGAACGTCCGTATAGATGTGATGTATGCGACGCCTTTTTCCGGTATAAGTTCAACCTGTATTCACATCAGTTTAGTAAAATGCATAAAGAGAATTTGCAGAAGACGCAAAAGATTGAAGCTGTCGAGGACTCACTTTAA
Protein Sequence: MKCAVHNCANKFKAKKKHSQQFSFFSFPKNPDILKEWISFCRKHNKDKQRKTYQKSVICNEHFNDEDIQGGLQFQMGLCTKRTLRPGAIPCINKNNISLAERERSEKRKNQKLVAELLEEAAVREEAEANGAIVVAPGFVRNTGIVSVPDFVSATGNAFDPSSHVPGENDPLAEELEEMHASTKIIERVPTPNEQKKCRTCYRQFVIDEKAKDLCEEQNAVMLYHIEVITGIWIQCQSETYQFMCPTCVDNLRIAIEFRETCIQTELQLAGGDNLPIQTDDEVFEVEPQAKNENDIKDDFVSVFPADKENGSTIVVESLSTARTNQIIQGLHPAAADPNSIALGAQIYEDLLNEYKGNEKTIRPKTRHIPVIRGEKKKPKRPRPSEPKPKREKRSREEKNRIRREHIRALPLNHVCDQCGASFRVRCNLTIHMLRHTQTKNFKCPECPKQFYDAYMRNIHIRVRHRGERPFVCNYCPKAYGSSNTRYLHEKKVHGAGPRIHRNLNKVNQKLEIKKNQELGESRENVRHFCEYCDKSYATKYALNGHINAHMGVKPYKCKLCDMRFSDPQSKKKHEMRHDSKRPFECDICLKGFYTRTKLKEHERIHTGERPYRCDVCDAFFRYKFNLYSHQFSKMHKENLQKTQKIEAVEDSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01554732;
90% Identity: iTF_01553265;
80% Identity: iTF_01553265;