Basic Information

Insect: Zaprionus ghesquierei
Gene Symbol: -
Assembly: GCA_018904095.1
Location: JAEIGP010000662.1:3256216-3259916[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.15 10 6.7 6.3 2 23 346 368 345 368 0.96

2 16 0.016 1.1 9.7 1.5 2 23 411 432 411 432 0.93

3 16 5.2 3.5e+02 1.8 3.0 2 17 443 458 442 469 0.75

4 16 0.023 1.6 9.2 0.3 3 23 502 522 500 522 0.95

5 16 0.00028 0.019 15.2 0.5 1 23 530 553 530 553 0.98

6 16 0.00085 0.059 13.7 0.5 2 23 558 579 557 579 0.97

7 16 0.00016 0.011 16.0 0.4 1 22 627 648 627 651 0.90

8 16 1.4 98 3.6 0.4 3 21 658 676 658 677 0.89

9 16 0.0089 0.61 10.5 1.0 1 23 696 721 696 721 0.96

10 16 0.019 1.3 9.5 0.7 2 23 737 759 736 759 0.93

11 16 0.0079 0.54 10.7 0.2 2 23 765 787 764 787 0.92

12 16 0.015 1 9.8 0.2 2 23 791 813 790 813 0.96

13 16 5.5e-05 0.0037 17.5 1.4 1 23 819 841 819 841 0.98

14 16 0.05 3.4 8.2 1.0 1 23 845 868 845 868 0.93

15 16 0.0035 0.24 11.8 3.0 1 23 874 897 874 897 0.96

16 16 0.0013 0.087 13.2 0.9 4 23 904 929 901 929 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.15	10	6.7	6.3	2	23	346	368	345	368	0.96
2	16	0.016	1.1	9.7	1.5	2	23	411	432	411	432	0.93
3	16	5.2	3.5e+02	1.8	3.0	2	17	443	458	442	469	0.75
4	16	0.023	1.6	9.2	0.3	3	23	502	522	500	522	0.95
5	16	0.00028	0.019	15.2	0.5	1	23	530	553	530	553	0.98
6	16	0.00085	0.059	13.7	0.5	2	23	558	579	557	579	0.97
7	16	0.00016	0.011	16.0	0.4	1	22	627	648	627	651	0.90
8	16	1.4	98	3.6	0.4	3	21	658	676	658	677	0.89
9	16	0.0089	0.61	10.5	1.0	1	23	696	721	696	721	0.96
10	16	0.019	1.3	9.5	0.7	2	23	737	759	736	759	0.93
11	16	0.0079	0.54	10.7	0.2	2	23	765	787	764	787	0.92
12	16	0.015	1	9.8	0.2	2	23	791	813	790	813	0.96
13	16	5.5e-05	0.0037	17.5	1.4	1	23	819	841	819	841	0.98
14	16	0.05	3.4	8.2	1.0	1	23	845	868	845	868	0.93
15	16	0.0035	0.24	11.8	3.0	1	23	874	897	874	897	0.96
16	16	0.0013	0.087	13.2	0.9	4	23	904	929	901	929	0.83

Sequence Information

Coding Sequence: ATGTCGGAGAGTTTGAAAACAAAGAGCGAAACTGGGCCTAGCTGCCTGCATTGCAGAGTGCACAATTCAAAACTGTCGTATCAGGAGATATTTGATGAAGTGGGCCTTGAGATCGAACTGGCCGATTTGCTGGCCAAATATTTTCAGATAACTGTAAAACGTGACCCCCAAAAGTCGCAGCTGCTGTGCCAGGAGTGCGTTAAGACGCTTATACGATTTTTCGATATTGACGAACTGCAGCGGGAGCAAGATGCCGCCACCAAAAAGGGGACGAAAGCTGTGTCAGAGCCCGCGCCTGTGGCAACTCCCGTTGCCAGGAAGGAAACAAAGTCCGCCGGAAAAAAACAGACGCCGCCAGCACCTAAGGCTATTGTTGAGTCAAAAACCAAACCAGTCGCATCGATAAAGTTGACGCCTGCAGCCGATTTGCAGCCGGCAAAATCTGTCCCACTTGAACCTCAAACGAAACCGTTTTCCATACGTATAACCAGGGCAAAAACTCTGGCTACGGCGCCTAAGCGTTTGCAGATTATACCCAAAGGCAAAGTCGCCGAAAAGCCTGCGGGAAAGAGTAAAAAAACCCGAGAAGGCGACCAGGAGCAAATAAGTGCGTTAATACGTGATATACTTGACGACGAGGAGTCGCCGCACGATGAGAAATTCGCTAAGGCGGCTGACACAGTGCGCCACCTAGAGACTCAGGCTGGCGACGAGCAGGAGCTGTCGCTAGAAGCGGTTGTCGAGGATCCGGAGGAGCAGCAGCAAGAGCCCGAAAATGGAGATGAGTTGGAGTTTTTAGTTGAGCACGAAGACGATTCGTCTGCATCGGACGAGCGCCCGTTTAAAACGATTAAGATGGCACACCCGGATGATTCACAGTCTGCAAACGAGACGCAAAGCGAGAATGAATCCCTAAAAGTGGAACCATTTAATTTTGTGTTGATCAAGGAATCTGATGGCATTGACGATTTGCTGGAATATCTGGGAACTGTGGTGAAGACTTGCTTTGAGACCCTCACCTTCGATTGGTCCACTGTATGCCGGCACTGCTCGTTGAAGTGCAGCAAATTCGAGAACCTGCTGAACCATATGCAAAAGCGCCATCAGTTGCCGGAGGAGCGCTTCAAGTGCCCCATAGACGGTTGTACAGCAGAGCTGAAGGGCCACAAGTTCCTGGCCATGCATTTGGTAGTGCTGCATGCGCCAGTTGCAGACATTCCCATCTATGGTTCTTGTCCCGAGTGCAACATTACTTTCTCCAATATATTGCAGTACAACAAGCATTCGTGTGCCCATGTGATCAAGAAACGTCGTGGCATACGCTTGTACTGCGAGATGTGCGGCTTGGAGTTCCCTTCCTGGAAGCGTTTCAATTTCCATAATCAATTCCATCTGGAGCGCCATAGACCGCGCGCTTGTTTCGTGTGCAACTATGCGAACAACAATATCGACGATCTCTTCCAGCATTTGCACTACTCCCACGAACCCGAGGGTACGCTCTTCTGCGATCTCTGTGATCGCAACTTTCGTGATGCAGCCGTTTTTATGGAGCACAACAAGTCGCACGCCAACGTCAGCAGCACCACCTACAGCTGCAGCGAATGCAACGCTAACTTTGAGACCCGTGGACGCCTTAACGGTCATATGCGCTCCACACATTCCTCCGTTATTAGCTGCGAGCTATGCAGCCGCGAGTTTGCCTCAGAGACCACCTACAACATTCACATGAAAAAGCATTTGATTATCGAGCGTGAGGTGCACGTTTGCAGCAGCTGTGGCACGCTCAGTGAGTACCACGATAAGATGGTGGCACATGTAGAAAACGAGAATTCAGCTTGCTTTGGCGTCGATATCTACGCGGAACTGCTGCGTGATGCCTACATCTGTGAATACTGCTCGGCATACTTCAAGCAAAAGTCCGATCTGCGCGCTCATCGCGATTCAGGCGTGCATAAGAATGGCATGTTTTGGTGTCAGCCATGTGAGAAGGAGTTTGCGGACATGAAGCTCTATCGCCATCATGTGCGCAACTATCAGCTACAGCGCTCCGATGTGGAGCATCGTAAATTAGAGATTGGTCTGTACTTTATGTGCGATTTTGAGGAATGCTACGAGTCATACATCAATTGGAATTCGCTGTACACGCACAAGCGTCGTACGCATGACCCCGTCGAAAAAATAGAATCTAAAATGAAGGATGGTGAATGGATCTGCCAGTTCTGCCAGAAGGTGTGTCCCTCCAAGATGTCGCTATCGGTGCATGTGGCCAGAAGTCACAATAACAACAATGTAGTCTGTCCGTTGTGCAAGGCTTCGTATAAGGATGATGAGGCGTTGAAGAAACATCATGCCTACTGGCACGAGCCGATGGAGTGTGCGCTGTGTCTGAAGGTTGTCAAGAATCGCCGTAACTTCGATACGCACATGAATGTGGTGCACTCGGACAACAAGCGGTATAGGTGCGCTGTCTGCCAAAAAGGATTCTATCACAAGAGCGAAATGGAGGCACATCAGCAGCTGCATAATCAACTCTTCAGCTGCGAGCAGTGCAGCTTTCAGACGCGCAACAAGAAGTCGTTGTCAGTGCATGTGCTCGGCCAGCATTTGCAGCGCTTCGCCTTCAAATGCAATATGTGCGATAAGCGCTTTGGACGTCGTCAGGGACTGTTGTGTCACGTGCGGCGTGTCCATGGATCGAAGTTCATGTGCCGTGACTTTTTTGCCGGCGGCTGCACCAAGGCCTTTAGATCAACCGCACACCTTAATGTGCATGTGCGTAAGGTTCATAACGGAAGCATCGCATGTGACGACGAAAACGATAAAGTTGGGGAAGAGCAGGTGGAGCAACAGGAGAAAGAGGAGAACGAGGACGCAGAACTGGATGCAGAGCAGGTGCACAAAGTAAAACAGGATACCGCTGGTCCGTCTACATCGAAGAAACGTTGCATTAGCGTCTTTAATGATACAGAGATTGAGTTCCTAGGCGGCGATGAAGACGAAGACATGGAGATGCTTGAGGAGATTCAGGAAATAAAAAACCAGCGAAAAGCGCCCCCGAAGAAGCAAAAACGTACATAA
Protein Sequence: MSESLKTKSETGPSCLHCRVHNSKLSYQEIFDEVGLEIELADLLAKYFQITVKRDPQKSQLLCQECVKTLIRFFDIDELQREQDAATKKGTKAVSEPAPVATPVARKETKSAGKKQTPPAPKAIVESKTKPVASIKLTPAADLQPAKSVPLEPQTKPFSIRITRAKTLATAPKRLQIIPKGKVAEKPAGKSKKTREGDQEQISALIRDILDDEESPHDEKFAKAADTVRHLETQAGDEQELSLEAVVEDPEEQQQEPENGDELEFLVEHEDDSSASDERPFKTIKMAHPDDSQSANETQSENESLKVEPFNFVLIKESDGIDDLLEYLGTVVKTCFETLTFDWSTVCRHCSLKCSKFENLLNHMQKRHQLPEERFKCPIDGCTAELKGHKFLAMHLVVLHAPVADIPIYGSCPECNITFSNILQYNKHSCAHVIKKRRGIRLYCEMCGLEFPSWKRFNFHNQFHLERHRPRACFVCNYANNNIDDLFQHLHYSHEPEGTLFCDLCDRNFRDAAVFMEHNKSHANVSSTTYSCSECNANFETRGRLNGHMRSTHSSVISCELCSREFASETTYNIHMKKHLIIEREVHVCSSCGTLSEYHDKMVAHVENENSACFGVDIYAELLRDAYICEYCSAYFKQKSDLRAHRDSGVHKNGMFWCQPCEKEFADMKLYRHHVRNYQLQRSDVEHRKLEIGLYFMCDFEECYESYINWNSLYTHKRRTHDPVEKIESKMKDGEWICQFCQKVCPSKMSLSVHVARSHNNNNVVCPLCKASYKDDEALKKHHAYWHEPMECALCLKVVKNRRNFDTHMNVVHSDNKRYRCAVCQKGFYHKSEMEAHQQLHNQLFSCEQCSFQTRNKKSLSVHVLGQHLQRFAFKCNMCDKRFGRRQGLLCHVRRVHGSKFMCRDFFAGGCTKAFRSTAHLNVHVRKVHNGSIACDDENDKVGEEQVEQQEKEENEDAELDAEQVHKVKQDTAGPSTSKKRCISVFNDTEIEFLGGDEDEDMEMLEEIQEIKNQRKAPPKKQKRT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01559910;
90% Identity: -
80% Identity: -