Zghe006049.1
Basic Information
- Insect
- Zaprionus ghesquierei
- Gene Symbol
- hang
- Assembly
- GCA_018904095.1
- Location
- JAEIGP010000394.1:20708731-20718961[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.2 14 6.3 1.0 3 23 326 347 325 347 0.93 2 15 0.14 9.9 6.7 3.5 3 22 454 473 452 473 0.89 3 15 0.00043 0.029 14.7 3.3 1 22 576 597 576 599 0.90 4 15 0.049 3.4 8.2 0.1 2 21 611 630 610 631 0.93 5 15 0.00049 0.034 14.5 0.2 2 23 768 790 767 790 0.95 6 15 0.0014 0.097 13.0 0.1 1 23 798 821 798 821 0.96 7 15 1.2e-05 0.00079 19.6 0.1 2 23 907 928 906 928 0.97 8 15 0.0002 0.014 15.7 2.9 2 23 1042 1064 1041 1064 0.97 9 15 0.016 1.1 9.7 0.2 2 23 1073 1095 1072 1095 0.95 10 15 0.0015 0.11 12.9 0.1 1 23 1108 1131 1108 1131 0.97 11 15 8.9e-05 0.0061 16.8 1.1 1 23 1205 1227 1205 1227 0.99 12 15 0.0014 0.094 13.1 0.9 1 23 1235 1258 1235 1258 0.96 13 15 0.039 2.7 8.5 0.7 2 20 1266 1284 1266 1286 0.94 14 15 5e-05 0.0034 17.6 0.4 3 23 1399 1419 1398 1419 0.98 15 15 0.0036 0.25 11.8 0.1 1 23 1454 1476 1454 1476 0.97
Sequence Information
- Coding Sequence
- ATGCGAGTGGTTTTTGGTCGTCTCTCGGTCTCTCTCTTGGTTCGAGCAGAGCAGATTAACCTGGTGCTGCTGGGGCTGGTGCTGGTGCTGGTGCTGGTGCGCATTGAACACGGGCATATGGAAAAAATTACGGCATTGGATCGCCTCTCGCTGTACATATGCCATGCCTGCATCAGCTATTTGAACTCTTGGCAGAGCTTCAAGAATCGCTGCCTCACCTCGCAGAGCAAACAGCGTCAATGGCTTGACTCTGATCGGAACAAGCAGCAGACGCTTTTGGGCTACTTGGACTTAAACAGGGCCGAGAATGGCAACGCCGTTGATCAACAACAACAACAACAGCAGCAGCAATCCGAATTGAAAATCGATTCGGCGACGGCTGCAGTCGATAAGGTGTCCGCCAACATATTGGATGGCATACCCTCCCAAAATCCGAATGTGAATCTGAACCCGGTTCAGAATCAGAATCAAAGTCTGCGATGTAGCAACGTTATGCCGACGCCACCGCTGCCGCTGCCGCAGTCACAGCAGTCGCAGTTATCGCAAACTTCAGCTGCAACAATGACTAGCAACGTCTTGGCCACCGCCTGTGCCGCTGGCACTGCCACAGCGTCAGCCTCAGCTGCCTCTGCCTCAGCTGCCTCTGCCTCAGCCTCTGCTTCGGCGACTTCGTCTGTCTCTGCTGCAGTCACGACTCCGTTGCTCATGCCTCCGCTGCCTGCCGTGCCCATTAAAGATGAGCCCATGGATGACACGGACGATGACTTTCAAATGAAGTGCATTGACGAGTCCGATGACATGATGGATCCCACAATGTTCCTAGAGCGCTCCGAGCATGAAGGCGATGTGCCAATAATGACCTCCGAATATGATTATGCGACGCAGCATGGCGTAACGGCAGTTGCGGCCGCAGCAACGCTACCCGCCACTGCCGTGGCAAATGTGGCAGCCGCTGGTGATTCCAAGGTGGCCAGTTGCCGCGCATGTAGTCTGCAATTCTCGACGCGGGCGAATGCACGACGTCACGAACGCAATCTGCATCCGAATCTATTTCAATTGTCAACAGATTCACCCAATAATACGCCCATAACAAAACCGACCCCAGCACTAGCGGCCGCACTGGAGATACAACGAGCCGCCGCAGCGGCGGCAGCAACAGCGGAGGCAACAAAAGCCGCTGCCGGTGGAAATATATCGACACAAAAATACCGCCAGGTGGTCATGAATACGTTCATCAAGTGTGAAAACGGCGGCTATGACTATGACAATCCGGAGCAATATCAGCAGTTGTTGACGCGCGACAAGGTCGAATTCATTCGAGAGAATAGCGAATTTCTGGAACAATACCAGACAATGACATGTCGTTGTTGCAACAAATTTTTCAGCACATACAAGAACTTTATGGCGCATGTAAGGAAAAAGTATCCGCTTTTGCCGCGCAACTTATGTTTTAATTGCCTCAAAATGAACGATTCCAAGGCGTTGTTCATATCGCATCTTAAGAAGCGCAATTGCATCAATTTGTATCGTGTACTGAATGCTTTGCGTGCCAAACAGCCCAGTTTTGCTCATGCCACAGCCGGCGGAGGAGGAGGAGGAGGAGGAGGGTCAGCAGATCAGCAGCAGCACCTACAGCTATCTACGTCGCTTACCTCGTCGGCACATGATACATCCGCAGATCGGCCAGAGAAGCTGCGCGCCAAGGAGCTGCTGGTGAATAAACTCTACGAATGTAAACTCTGCCCCAAGGGATTTCGCACCAAGCACGAGTTTCGCACCCATGTCTATGATAAACATGCGGATGTGCAGCGCAAGGATAACAATTCGATACAGTGTAGTTTCTGTGGCCTGGACTTTGCCGATCCAGTGGATCGACGTCGGCATTACAACAATATGGACTGCATTGTGCGGCTGCGCTGCATGACCTGTGATGCCAAGCTGGAGACGCATCAGCGTTTCCTCGACCATGTGTATCAGGATCATTTGGGCGGTGTGAGCAGCGATAATGCGTCGACTGCAAACAGCGGCCTGGATCATTCGCCTGGCAAGCGCAGCCTATTGGGTGCACTGGGCATTGGGATTAGTCAATCGTCTAACGAAGAGTCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGACGCTGCACCCAAGTCGCAGTATTTTTCACGCATGCCCCAAGTGTGTCCGATCTGTGGTCAGCAGTACAACAACTACAACAATGTGTTGCGACACATGGAGTCGAAGCATCCCAACAAATTGCCCGAAACCTACAAGTGTGTACGCTGCGGATTGGGCTATCCGCGCATCTCTTACCTGCGCGAGCACATGATCAATGTGCATGGCGTGGATAAGAATCGACATTCGGGCGGATTTGAGTATATTGTAAATGCGGATGCAGTCAAATTGGCGGATGGCAGTACACCCAATGTCTATACGGGACGTTATGACTATGTGATGAAGGATTTGATGTCCATAACAAATGGTGGGACACTCGATGATGATGACGAGGAGACCGGCAACATAGCCAAAAAGATGCGTCTAGACGACAGCAGCAACAATAGCAGCATCAACACAAGCATTGCCAATCAACAGAAGGAGTGTCCCATCTGTAATGCGGTGTTTAGCAACAACATTGGATTGTCCAATCACATGCGGTCCCACTACACCGCCTCGACGGCAACAAATGCAGCCTTGGCGGCGGCAAATCGCATGACGCCCAAATCGTTGACAATTACCGCAACGCCGCCACTGGACACGTCTGTAGGAGGAGGAAACACAACAGCTGCGGCAAGTCAATCGATTACAACCATAACTGCAGAGGGTGAAGATGCCATGGATGGCCCAGTGGGTGTAGGAGCAGGAGTGTCTGGAGCAGCAGCGGCGGCGGCGGTGACTCCCTCTGGCAGTTTACCGCCCGCCATGGCGCATCAAACACCACAGGAACAGGCCGTCTTTCGACGTAGTCTGGATCAGGCAGCAGATCGTCGCTTTCGCCGCATGCGTTGTCGCATCTGTCAGCGTCGCTTTAGCTCCAAAAAATCCTATCGCTATCACATGCTAACCGATCATCAGGTGCAGAACGTGCAGTTCATCAAGTGTAAGCTATGCAATGCCGAATTCGCTTACGAGAAGGGGCTGAAGGTGCATCTGTTCAAAGTGCACGGACGTGCCATTAAGGATGAGATGATTGTCAAGCAATTCGAATGTGATGTCTGCTCCATTGTTTACAGCTCGGAGCTGGAGTTGCAGCAACATAAACGTAGTGTGCATAAATCCCAATTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCCGCTCTACTGGTATCAGTGCAAGTATTGTCCATCCAATTTCAATACCAACAAGAAGCTAGCGATTCATATCAATTCGCATGATGAGTTCGATTCGAATGATTATTCGTGCAAGGATTGCGGCAATGTGTACAGCGGACGTAAGAGTTTATGGGTGCATCGCTATAAGAAGCATCCGCAGGTGCCAGATCCCGCTGAGTGCACGCTGTGCCGTAAAATGTTCTTTGATCGCCAAATGCTGGAGAATCATACGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAGCAGCTGCTAATGCTAGATGACGCCACTGGAGCAGGAGTAGGAGGAGGAGGTGGCGGCATTGCTGGTGCTGGCGATGCAGCCGATAGCAATGGTGGCAAGACTAAGAATTCCAGCACAAGCACCATCAACACAAGCACACTGAAGATACGCATACCCGAAGTGGCATGCACCATTTGTGGGGCACGTTTCACAGATCAGGAAATGTTTAGCAAACACATACAGCGACACGAACAGGAACTCTATGTGGACAATCCGCTGGCAGCGATGTTCGATGATGGACCCGCCGATGCTGGACAATTTCAGGTGGAGCGACAAAATGAGAATGGGGAATATGCGTGCGACTTATGCGCCAAGACGTTCCCGCAGGTGATCGCGCTCAAGGTGCATCGCAAGTGGCATTTCAGAGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAA
- Protein Sequence
- MRVVFGRLSVSLLVRAEQINLVLLGLVLVLVLVRIEHGHMEKITALDRLSLYICHACISYLNSWQSFKNRCLTSQSKQRQWLDSDRNKQQTLLGYLDLNRAENGNAVDQQQQQQQQQSELKIDSATAAVDKVSANILDGIPSQNPNVNLNPVQNQNQSLRCSNVMPTPPLPLPQSQQSQLSQTSAATMTSNVLATACAAGTATASASAASASAASASASASATSSVSAAVTTPLLMPPLPAVPIKDEPMDDTDDDFQMKCIDESDDMMDPTMFLERSEHEGDVPIMTSEYDYATQHGVTAVAAAATLPATAVANVAAAGDSKVASCRACSLQFSTRANARRHERNLHPNLFQLSTDSPNNTPITKPTPALAAALEIQRAAAAAAATAEATKAAAGGNISTQKYRQVVMNTFIKCENGGYDYDNPEQYQQLLTRDKVEFIRENSEFLEQYQTMTCRCCNKFFSTYKNFMAHVRKKYPLLPRNLCFNCLKMNDSKALFISHLKKRNCINLYRVLNALRAKQPSFAHATAGGGGGGGGGSADQQQHLQLSTSLTSSAHDTSADRPEKLRAKELLVNKLYECKLCPKGFRTKHEFRTHVYDKHADVQRKDNNSIQCSFCGLDFADPVDRRRHYNNMDCIVRLRCMTCDAKLETHQRFLDHVYQDHLGGVSSDNASTANSGLDHSPGKRSLLGALGIGISQSSNEESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDAAPKSQYFSRMPQVCPICGQQYNNYNNVLRHMESKHPNKLPETYKCVRCGLGYPRISYLREHMINVHGVDKNRHSGGFEYIVNADAVKLADGSTPNVYTGRYDYVMKDLMSITNGGTLDDDDEETGNIAKKMRLDDSSNNSSINTSIANQQKECPICNAVFSNNIGLSNHMRSHYTASTATNAALAAANRMTPKSLTITATPPLDTSVGGGNTTAAASQSITTITAEGEDAMDGPVGVGAGVSGAAAAAAVTPSGSLPPAMAHQTPQEQAVFRRSLDQAADRRFRRMRCRICQRRFSSKKSYRYHMLTDHQVQNVQFIKCKLCNAEFAYEKGLKVHLFKVHGRAIKDEMIVKQFECDVCSIVYSSELELQQHKRSVHKSQLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNVYSGRKSLWVHRYKKHPQVPDPAECTLCRKMFFDRQMLENHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQLLMLDDATGAGVGGGGGGIAGAGDAADSNGGKTKNSSTSTINTSTLKIRIPEVACTICGARFTDQEMFSKHIQRHEQELYVDNPLAAMFDDGPADAGQFQVERQNENGEYACDLCAKTFPQVIALKVHRKWHFRGXXXXXXXXXXXXXXXX
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -