Zghe002995.1
Basic Information
- Insect
- Zaprionus ghesquierei
- Gene Symbol
- -
- Assembly
- GCA_018904095.1
- Location
- JAEIGP010000662.1:3792959-3796475[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3.1e-12 7e-09 35.1 0.0 1 41 244 285 244 288 0.90 2 4 2.4e-14 5.4e-11 41.9 0.1 2 39 299 336 298 339 0.94 3 4 4.2e-18 9.5e-15 53.9 0.0 1 45 353 398 353 398 0.98 4 4 2.6e-20 6.1e-17 60.9 0.0 1 43 405 448 405 450 0.96
Sequence Information
- Coding Sequence
- ATGACTAGTTTAGGCATGGGCATGAACGGCGGTCTGTTGGGCGTGCCCATGGGATTTCTGGACTTCACACCGGAACCACCAGCACCATCGGCCACACCAGTTACCGTTACGTCGGAACACGTCGATCTATCGTGCAACCCCAGTACCGATACACGCGATCTATCAAATCCCACCGAACCGCTCGACATAGACAATCATTTGGCTCAGCAAATCCATCGGCTCGATCAATCTCCCATGCACTCGATAGCGCATCATCACACGACCGGAGACGAGAGCAACTCGAATCTGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACTGTCATGGAGATTGATCCGAGCCAAATCAAACACGAGCCAGGCATGATTATAACGCCAGAGATTGTCAATATGATGTCCACTGGGCATATGGGTCAGTTTAATGGTCCCAAAGCTTGGACACAAGATGATATGAATTCAGCTTTAGATGCATTAAAGAATCAAAACATGAGCCTGACGAAAGCATCTGCCATTTATGGCATACCCTCGACAACATTATGGCAACGTGCACATCGTCTGGGCATCGAAACGCCCAAGAAGGAGGGCGGTACCAAATCATGGAATGAGGATGCCCTGCAGAGTGCACTGGAGGCATTGCGTTCGGGTCAAATATCGGCTAATAAAGCATCGAAAGCCTTTGGTATACCCTCATCGACGCTCTACAAGATAGCGCGTCGGGAGGGCATACGGCTGGCGGCGCCATTCAATGCCGCACCAACCACGTGGACACCCGAGGATTTGGAGCGTGCATTGGAGGCGATACGTGCCGGCAATACGTCCGTGCAAAAGGCGAGTGCTGAGTTTGGCATACCGACAGGAACACTTTATGGACGCTGCAAACGGGAGGGCATCGAGCTATCGCGTTCAAATCCAACACCTTGGTCCGAGGATGCCATGAATGAGGCATTGAACTCAGTGCGCGTTGGCCAAATGTCCATCAATCAGGCGGCCATACACTATAACCTGCCCTACAGCTCGCTCTACGGGCGCTTCAAGCGCGGCAAATATGATGTGGCCAACATGAGCGGCATTTCGGTGCTTAACGCTTCGGGCAACACCACCGGCAGCATTGAGATTATCGAACATAGTCAGGAGAATTCGGTAGGTTATCCCTTTCCCCGGAGATAA
- Protein Sequence
- MTSLGMGMNGGLLGVPMGFLDFTPEPPAPSATPVTVTSEHVDLSCNPSTDTRDLSNPTEPLDIDNHLAQQIHRLDQSPMHSIAHHHTTGDESNSNLVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVMEIDPSQIKHEPGMIITPEIVNMMSTGHMGQFNGPKAWTQDDMNSALDALKNQNMSLTKASAIYGIPSTTLWQRAHRLGIETPKKEGGTKSWNEDALQSALEALRSGQISANKASKAFGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLERALEAIRAGNTSVQKASAEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMNEALNSVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDVANMSGISVLNASGNTTGSIEIIEHSQENSVGYPFPRR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -