Zgab004106.1
Basic Information
- Insect
- Zaprionus gabonicus
- Gene Symbol
- RREB1
- Assembly
- GCA_018903695.1
- Location
- JAEIFO010001440.1:8247503-8261811[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.026 1.9 9.0 0.8 1 21 113 133 113 135 0.93 2 11 0.78 55 4.4 2.9 2 19 219 236 219 239 0.94 3 11 0.0065 0.46 10.9 0.1 1 23 421 443 421 443 0.97 4 11 9.1e-06 0.00064 19.9 0.7 1 23 453 475 453 475 0.99 5 11 0.00061 0.043 14.1 2.0 1 23 481 504 481 504 0.97 6 11 1.1 80 3.9 0.3 1 16 792 807 792 809 0.89 7 11 6.4e-05 0.0045 17.2 0.3 2 23 1180 1201 1179 1201 0.97 8 11 0.11 7.5 7.1 6.3 1 23 1207 1230 1207 1230 0.97 9 11 6.3 4.5e+02 1.5 4.3 1 23 1358 1381 1358 1381 0.87 10 11 0.0062 0.44 11.0 0.5 3 23 1435 1455 1433 1455 0.96 11 11 0.00098 0.069 13.5 4.8 1 23 1461 1483 1461 1483 0.99
Sequence Information
- Coding Sequence
- ATGATTGCTGCCGGCGCCGCAGCCAGCGCCAGCATCGTTGTCGATTATAGCGCCAGTGGCGATGCGAGTTCGCTGCGCAAGAAGTTCCGCCTGAATCGCAGCAATGTCGCTGGCGAATTATCCGAATCGGGCTTTGTCGATGCCAGCGCCAACAGCGGCTTCTTGCTCGGCAACAGCAGCGCTGCAGTCGCTGCGCAGTCGGCGTCAGCATCGGCCTCGTCAGCACTGCTGCAGGCATCGTCGAGCAGCTCTGGCGGCTCATCGCCGCAACAGGGCGCCGGCCTGTGCCTATCAAGCGCCGAGTCTGGCATCGGAGCTGGGGAGGAACACATGAAGTATCTGTGCCCCATCTGCGAGGTCGTCTCGGCCACCCCACACGAGTTCACCAATCACATAAGGTGCCACAACTATGCGAACGGCGATACCGAGAACTTCACCTGCCGCATCTGCTCGAAGCACGAGCACGACGATCACGACGATGATCACGCCCACTCCGCCTCACACTCACTGGCCTCGACACCCTCGCCCACACCTCCGCCCCCTGCTGTCGCCTGCCTGACCTGCCCTGCCTGCCCCGCCCACCTGGCAGAGCCCTTCGAGACGTTGCCAGCACTGTGGCAGCATCTGGATGGGGAGCACGCCGATATACCCGCCAAGTGCCGTGACTGCGAGGTGATCTTTGCCAGTCATCGCCAGCTGCAGGTGCACAACTGCCACCAGCAACTGCGCCGTCGCCACCTGCTCCCTCCGCTGCTGGGCAACAGTTCCTCGCCCAAGCAGTTGCGGCCGGAGGAGGAGGACGACGATGAGGATGCTGAATACGATGAGGAGGAGGACGAGGATGCACAGCAGCAACGAGTCAAGCAGGAGGAGGATGAGGAGGACGCGGAGCAGCAGCAAGCTGATGACTTCTTTCAGCAATTTCAATATCTCAAGGGCAAAGCAGCGCAACATGCTGCCGCTGCCACCGCCGCTGCTGCTGCACATGCTCATGCCGCGGCCGCTGCACACGCTGCAGCTGTGGCTGCCTCCCAGCTACCGTCGCCCATCAAGCACGAGCCCATGGAGCGAGGAGAACCTTCGCGGGATCTTGCCGACATACAGAGCATTCTGAACATGACCAGCTCCAGCTGCACATCGAGTTTCCTCCGCAACTTTGAGCAATCGGTGAACACGCCCTGCTCCAGCCGCGATGGGGACGGGGAGGAGGCACAGGATGCCTTCACCAGTGAGTTCCGTCGCATGAAGCTGCGTGGCGAGTTCCCCTGCAAGCTCTGCTCGGCGGTGTTCCCCAATCTGCGTGCCCTCAAGGGACACAATCGGGTGCATCTGGCCGCAGTGGGTGCAGCGGGTCCGTTCCGCTGCAACATGTGTCCCTATGCTGTGTGCGACAAGGCGGCGCTGGTGCGGCACATGCGCACCCACAACGGCGATCGGCCCTACGAGTGCGCCGTCTGCAACTACGCCTTCACCACCAAGGCCAACTGCGAGCGGCATCTGCGCAATCGTCACGGCAAGACCAGCAGGGACGAGGTGAAGCGGGCGATCATCTATCATCCTGCAGAGGATGCCTCCTCGCAGGAGCAGGAGCAGCACAAGGCGGGCACAGATCTGGATCTGAGCTATCGCTCGCTTACTCCTCCCGTGGAGGCACCTCCTGCCTCGCAGCTCAAGCACATGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGTTGCAGATAAGCCAGCAACTGTTGCGCCTGCTGGCAACTCACTGCCCTTGTCGCTGGGCGTGCCCATGCCTGCGGCTGCCCCCGCCGGGCCCGTCAAGATGGTCATCAAGAACGGCGTGCTGATGCCCAAGCAGAAGCAGCGTCGCTACCGCACCGAGCGTCCCTTTGCCTGCGAGCATTGCTCGGCCCGCTTCACGCTGCGGAGCAACATGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCCGCCAGCAATGGCCACGCGCCGCATGCACAGCTAGACGATGATGAGCCGCCCAAGCTGATCATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGGAGCGTGAGCAAGAGCAGCCAAGAGAGCCACTCCCACGCAGCTCCACGCCCATTAAGCTGGCCAAGCAGGTGGCTGACAACATCCTCGAGCAAGCCATCAAGGCAGGCGCAGCTCCAGCGGAGTCCACTGCCCCCTCCTCGGCCTCAGCAGCCCCCACGGCCATGAAGTCAATGATAGCACAAGCAGATGCTGTGGCCAAGTCCCTCAAGGATGTGGCCAGTTCACCCTTCAAGGATGACTCACAGGATCTGGTGCCGGTGGCTAAGCTGGTGGACAATGCCACTAGCAATCAGTCGATGTCCTCGTTCAACAATTACTTTCGTCCCAGCGATGTGGTCAACCACATGGAGCAGAGCGACGAGGAGGGACTAGTCGCCTCGGGCAGTGCCAGCGAGAGCAACAACTCGGGCACCGAGGACGTGGCTGCCTCTGCCACGGCCAACGGGGGCTCCTCCTCGAGTGACACCAAGAAGAAGTCCGCTTACAGTCTGGCACCCAATCGGGTCAGTTGTCCCTACTGCCAGCGCATGTTCCCCTGGAGCAGCTCGCTGCGTCGCCACATACTCACCCACACCGGACAGAAGCCCTTCAAGTGCTCGCACTGTCCACTGCTCTTCACCACCAAGTCCAATTGCGATCGTCATCTGCTGCGCAAGCACGGCAACGTCGAGTCCGCCATGTCGGTCTATGTGCCCGCCGAGGATGTGCGTGAGCCCATTCCGGTGCCCAAGTCTGTGGAGGAGATCGAGCTGGAGGAGCAGCGTCGGCGACGTCGTGCCCTCGAGGAGGAACGTGAGCGGGAGAGGGAACGCGAGCGTGAGCTAAAGCGTGAGCGTGAACTAGAATTGGAGCGCGAGCGTGAGCTGGAACTGGAGCGGGAGAGGGAGCGAGAGCAGCTCATACAGCAGTTTGCGGCAGCGGCACAGCAAGTGGCAGCGGCGGCAGCAGCAGCCGCAGCAGCACAAGCCGGAGCTGCAGGCGGTGCATCCTCACCTGCACCGGGGGGTGCAGTCGATGCCCAGCTGGGTTCGGATCTGCCCTACAAGTGTCATCTGTGCGAGTTCTCCTTTGGCGAGCGGATGCAGTGCCTCGAGCACATCAAGCAACAGCACGCACAGGAGTTTGCCCTCCTGCTGGCCAAGGGTGCCATCGAAACGGAGCCAGCTACGCAGGCCGCTGCTGCTGCAGCACCTCCCTCTTCGGCTGCCCACTCGGATGAGGAGGGTGGCAAGGGGGGCAAGTACCCCGCGTACAGCAACCGCAAGGTGATCTGCGCCTTCTGCGTGCGTCGCTTCTGGTCCACTGAGGATCTGCGGCGCCACATGCGCACCCACTCGGGCGAGAGACCCTTCCAGTGTGAAATCTGCCTGCGCAAATTCACCCTGAAGCACTCCATGCTGCGCCACATGAAGAAGCACAGCGGCGGAGGGCGTGGCAGTGGAGGCAGTCACAATGGCGATGCGGGTTGCCAATCCGATTGCTCAGATGATGAACACTTGGGTGCCACACCCCCGACCACGCCTACACCAACGCCCACACCGTCGCTGGTGTTGCCCGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTGGTAACTTGCTTGGCATAAGCGATCAGGGCATACTGAACAAGCTGCTCTCCTCGGCGGATGAGGCAGCCAAGCTGCTCGGCGTGGATAAGTAA
- Protein Sequence
- MIAAGAAASASIVVDYSASGDASSLRKKFRLNRSNVAGELSESGFVDASANSGFLLGNSSAAVAAQSASASASSALLQASSSSSGGSSPQQGAGLCLSSAESGIGAGEEHMKYLCPICEVVSATPHEFTNHIRCHNYANGDTENFTCRICSKHEHDDHDDDHAHSASHSLASTPSPTPPPPAVACLTCPACPAHLAEPFETLPALWQHLDGEHADIPAKCRDCEVIFASHRQLQVHNCHQQLRRRHLLPPLLGNSSSPKQLRPEEEDDDEDAEYDEEEDEDAQQQRVKQEEDEEDAEQQQADDFFQQFQYLKGKAAQHAAAATAAAAAHAHAAAAAHAAAVAASQLPSPIKHEPMERGEPSRDLADIQSILNMTSSSCTSSFLRNFEQSVNTPCSSRDGDGEEAQDAFTSEFRRMKLRGEFPCKLCSAVFPNLRALKGHNRVHLAAVGAAGPFRCNMCPYAVCDKAALVRHMRTHNGDRPYECAVCNYAFTTKANCERHLRNRHGKTSRDEVKRAIIYHPAEDASSQEQEQHKAGTDLDLSYRSLTPPVEAPPASQLKHMLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVADKPATVAPAGNSLPLSLGVPMPAAAPAGPVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASNGHAPHAQLDDDEPPKLIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXREREQEQPREPLPRSSTPIKLAKQVADNILEQAIKAGAAPAESTAPSSASAAPTAMKSMIAQADAVAKSLKDVASSPFKDDSQDLVPVAKLVDNATSNQSMSSFNNYFRPSDVVNHMEQSDEEGLVASGSASESNNSGTEDVAASATANGGSSSSDTKKKSAYSLAPNRVSCPYCQRMFPWSSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNVESAMSVYVPAEDVREPIPVPKSVEEIELEEQRRRRRALEEERERERERERELKRERELELERERELELEREREREQLIQQFAAAAQQVAAAAAAAAAAQAGAAGGASSPAPGGAVDAQLGSDLPYKCHLCEFSFGERMQCLEHIKQQHAQEFALLLAKGAIETEPATQAAAAAAPPSSAAHSDEEGGKGGKYPAYSNRKVICAFCVRRFWSTEDLRRHMRTHSGERPFQCEICLRKFTLKHSMLRHMKKHSGGGRGSGGSHNGDAGCQSDCSDDEHLGATPPTTPTPTPTPSLVLPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIGNLLGISDQGILNKLLSSADEAAKLLGVDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -