Basic Information

Gene Symbol
ken1
Assembly
GCA_018903695.1
Location
JAEIFO010001573.1:17492091-17494307[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 4.3 3e+02 2.0 0.5 5 16 56 67 54 69 0.86
2 13 0.11 7.6 7.1 4.8 1 23 216 238 216 238 0.97
3 13 0.0016 0.11 12.8 2.0 1 23 244 269 244 269 0.92
4 13 0.00016 0.011 15.9 2.4 1 23 276 301 276 301 0.95
5 13 0.00047 0.033 14.5 5.1 1 23 311 333 311 333 0.97
6 13 9.4e-05 0.0066 16.7 1.4 2 23 341 362 340 362 0.96
7 13 0.014 0.97 9.9 0.5 1 23 368 390 368 390 0.97
8 13 0.023 1.6 9.2 1.9 1 23 396 419 396 419 0.97
9 13 0.076 5.4 7.5 3.7 1 23 425 447 425 447 0.95
10 13 0.0033 0.23 11.9 0.6 2 23 454 475 453 475 0.95
11 13 0.00014 0.0098 16.2 0.8 1 23 551 574 551 574 0.96
12 13 0.0015 0.11 12.9 3.0 1 23 580 602 580 602 0.95
13 13 2.6e-05 0.0018 18.5 1.1 1 23 608 630 608 630 0.98

Sequence Information

Coding Sequence
ATGGATGAAGAGAGTCAGGTCTCTGTGGATACAACATGTCGCACCTGCCTGTCAAGCTTGCATCACGTTGCAGCCTACGATTTGTTCATGCTCCCGGGGCTGGCAAAGAAACTTTGCGTCTGCACTTCCCTCTCGGTGGAACAATACGATGGCTACCCAAAAAGTCTTTGTACAAAGTGCTTCAATCGCTTGAATGATCTACATGATTTCCAGAAACAATGTGTGGATTCTATGCAAAAGTTCAAGGAGCTGTTGGTCAAAAGTGATAACCAACTGGTGGAGACATATGAAGTGCATCAGTTTGCCGATGTGCCCGTCGAGGAGGAGGACATTAATTTTGACCCACTGTTAAGTACCAAAGTGGAGATTGTCGAGAATGAAGTGGATGCTTTTGAAATGCTTGCAAATGCCGATCTAGAACCAGAGGACGCCAAGTCCGTCAGTTCTGAAGAAGATGGTGCAGAGGATGTGGATGACGATGAGGATTCGGACTTTGATGCAAGCAGCAGCGATTCGGATGACTCTATGCCTCTGTCCCGTTTGCGTAGTGGAGATAGTCCCACAAAGGCAGCCACCAAGGGAAAGGGGAAACCCAAAGCCACCGATGAAGATAAGCCCAAAAAACCCTCAAGCCGTCAACCATCCTTCGAGTGTCACATTTGTCGTCAGAACTTTAAGGTTGCTACCCGCTATGATGATCACATGAAGCACCACAATGAGGAACTACCATTCCAGTGTACAGTGGAGACGTGTAAGAAGGGATTCACGACAGCAGCAGGTTTGCGGCATCATGTCGATCACACGCACTGGGAGCTCTGCACCTTGCATCCTTGCACCGTGGAGGGATGTGATAAATCCTTTCCACGCACTCGTATGCTCAACCATCACTTGAAGAAGGATCATAAGATAATTATGCCTGAGGTTCTGGAACATCCATGCACCGAATGCGATAAGGTATTCCGCTGTTCAACGGCGCTGAAGAAACATATGTATAAGCACACAGGAGAGGAGCTGCCAATCTCATGCAATATCTGCGACAAAAGATTCCATATTAACAGCGAACTAAGGGATCACCTGCTGCGACATGCTGGCGTCAAGAATCACGTGTGTCCCTACTGTGGTGTGGGCAAGACCACACGTCAGGAAATCAATAAGCACATCTTGACCCACACCAGGGAGAAACAGTTCCAGTGTCGCCAGTGCGATCACGCCTCACACAACAAGCAGGCACTGGCCAATCACGTCAAGGTGGTTCACATGAAGATCAAGAACTTCGCTTGCCAGTTCTGTGGCAAGACCTTTGGCAAATCCTTTGCCTGCAAACTACACGAGAGACGTCACACAGGAGAAAACATCTCAGTCTGCAACATTTGTGGAAAGACGTTTCTGTTCGAGAAGAGACTTATTAAGCATTTGCAACTACATGAGCAGCGGGATGTACCACCTGAACCGGAGCTAGTTGATGAACCACAGGGCGATGAAGGTGGAGAAGCGAAACCTAAGGCTGCACCAGCTAAAAAGAAGAGATGCAATAAAGTGGAGCGTGTGGATATTTCCCAGTTGGCAGGCACCGTTATTAATCCCATACCATCTGTTACCGTTCCATCCTGGTCACCGCAAACGCCCGTCTTTACCAAGAAGGAAGGGCAGCACATTTGTCCTGGTTGTGGACGTGGCTTCAATCACATTGGAAATATGAAGCTTCACTATAAGGTTATTCACGAAAAGATCAAGGACTTCGCCTGTCGCTACTGCCCCAAACGATTTGGCAAGGCTCAATATCTGCGGCATCATGAATATACCCATACGGGAGAGAAGCCCTATGAATGTACAATGTGTGATGCACGGTTCGCTCATGAAGCATCTTTAAGAAGACACAAAGAGACCCATACGAAACCGCCAAGAGTTAAAAAACCCAAAGTACCCAAGAAGAAAATTGACCCGAAGCAGAGCCTTCGCAAGAAAGTTTTCGAAGAGTTTAAAGATCCGGAGGCAGAACGTGCGGCAGCTAAGGCCCAGTTGCAAGATCAAAAACGGGAGGAGCACGAAGCAAAACGAAAAAAGGAGGAAAAGCTTCAAAAGATTCAACAGGCTGCCTGTCAACAGCTTCAGGAGTTGCAGAAGCAGTTGCTCATCGAGAAGCTTCCTCATGGTAGCTTCACTGTCCCTGAAACTGGTATTGTTGATGCACTGAAAAAGGATATTACTGAGACATAG
Protein Sequence
MDEESQVSVDTTCRTCLSSLHHVAAYDLFMLPGLAKKLCVCTSLSVEQYDGYPKSLCTKCFNRLNDLHDFQKQCVDSMQKFKELLVKSDNQLVETYEVHQFADVPVEEEDINFDPLLSTKVEIVENEVDAFEMLANADLEPEDAKSVSSEEDGAEDVDDDEDSDFDASSSDSDDSMPLSRLRSGDSPTKAATKGKGKPKATDEDKPKKPSSRQPSFECHICRQNFKVATRYDDHMKHHNEELPFQCTVETCKKGFTTAAGLRHHVDHTHWELCTLHPCTVEGCDKSFPRTRMLNHHLKKDHKIIMPEVLEHPCTECDKVFRCSTALKKHMYKHTGEELPISCNICDKRFHINSELRDHLLRHAGVKNHVCPYCGVGKTTRQEINKHILTHTREKQFQCRQCDHASHNKQALANHVKVVHMKIKNFACQFCGKTFGKSFACKLHERRHTGENISVCNICGKTFLFEKRLIKHLQLHEQRDVPPEPELVDEPQGDEGGEAKPKAAPAKKKRCNKVERVDISQLAGTVINPIPSVTVPSWSPQTPVFTKKEGQHICPGCGRGFNHIGNMKLHYKVIHEKIKDFACRYCPKRFGKAQYLRHHEYTHTGEKPYECTMCDARFAHEASLRRHKETHTKPPRVKKPKVPKKKIDPKQSLRKKVFEEFKDPEAERAAAKAQLQDQKREEHEAKRKKEEKLQKIQQAACQQLQELQKQLLIEKLPHGSFTVPETGIVDALKKDITET

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2