Zgab016059.1
Basic Information
- Insect
- Zaprionus gabonicus
- Gene Symbol
- -
- Assembly
- GCA_018903695.1
- Location
- JAEIFO010000226.1:17004508-17010751[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.036 2.5 8.6 0.2 1 23 1051 1074 1051 1074 0.94 2 13 5.8 4.1e+02 1.6 0.2 1 23 1236 1258 1236 1258 0.91 3 13 0.00013 0.0091 16.3 2.7 2 23 1261 1282 1261 1282 0.97 4 13 5e-05 0.0035 17.6 0.2 3 23 1290 1310 1288 1310 0.98 5 13 4.1e-07 2.9e-05 24.1 4.1 2 23 1317 1338 1316 1338 0.97 6 13 3.7 2.6e+02 2.2 0.4 5 23 1351 1369 1348 1369 0.95 7 13 0.97 69 4.1 5.4 3 23 1376 1397 1374 1397 0.93 8 13 0.1 7.3 7.1 0.2 2 23 1408 1428 1407 1428 0.96 9 13 4e-05 0.0028 17.9 0.4 1 19 1434 1452 1434 1456 0.95 10 13 1.1e-05 0.0008 19.6 0.5 1 23 1464 1486 1464 1486 0.98 11 13 7.4e-05 0.0052 17.0 7.6 1 23 1492 1514 1492 1515 0.96 12 13 0.00014 0.01 16.1 5.9 1 23 1520 1542 1520 1542 0.98 13 13 0.021 1.4 9.3 8.2 1 23 1548 1570 1548 1571 0.95
Sequence Information
- Coding Sequence
- ATGGTTGAGAGCATGCAGTGCCCCGTGTGCACCCTCTACCTGCATGCGGGTATGAATCTCTCCGACCATTTGGAGACACATCCCAAAGAGCAGGTGATCAAGGCTTTGGTGCAGATGACTATTGTTGGCAACAATGTGGGAGGCAGTTCCTTGGCTACAGCTGTGCTCTCCACTGCCGCCGGTTGTGGCACAGCCGATGGTGGTGGCAGTGGTGGCAGCGGTAGCACTACATCCTCCACTTCCTCATCGGCGTTGTCCTTGTCGCTGTTGTCGACTGCAGTTGATCAGCCTGGACACTTTGCTGCCCAACAACAACAACAGTCGCCAATGAAATACGCATATACAGCGCATGCAACGCTGCCTCCTCCGCCACCGCCTCCACTGCAGCTCTTTGCGCAACAGTCGACGACAACGCTGTCGCATCAGAAGCCCCCACCCGCCTATGGCGCCGCCATCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAACGTTAACCTTGCACCACCGAGCGGGAAACATAGCAAAATTCATACGGATATCTTTCTAAATCCACCGCCACCACCACCGCCACAGTCCACGTTGCCGACGACGTCGTCAGCCTCCTCCACAAGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTTGTCAAACACATCAACTGGACGTAACATGAGCAGCCGGCAATCGACCAATTCTCCATTTGGTGCACTCTTAAATGCTGCCGCACAAGCTGCCTACGTTCCACCTGCCACTGGGGCACCGTCTGTGCTGCGCTATGCCGAATCACCTGTGGCCCACTACTTGGAGCGCGATAATGGCGATTTTATTGTTCAAGAGACGCCTAAGCATATTGTGGAATGCGTTGAAAAGGAGGATGGTCAATTCTCTGTCATTGAACGCATCTATCAATCGCCGCCCAGCGTGTTGCACATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTCGGAGGACAAGGTACACAACTGGACGCATAGCGAGGATGAGGATCAGTCAAAGGTGTCACATAGCCATGTGGAAGATGGCGATGATGAGCGCGAGGATAGCCGCAGTAGAGTTGGCATCAAGCAGACTACGAAAAGAACATCGCGCAAAACTAAATCCGGGGGAAGGATAAGCAAACGCACCTCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGCCTCAAGTGCTGTACATGCAACCTCATCGTCCTCATCATCTTCACAGCATCTCTCCACGGCGCCCTCAACCTCAGCTGCAGCTGCTGCCGCTGCCAACAGTGGTGCCTCATCTGCAGCGGGTAGTTCCAGCGGGGCCACCAAGTCGAAAAAGAATCGCGTGACGGTGCTGAGTGATGTGCCGCTAAATATGAATGAGTATTTGGATTTGGTTGGCAACATTGTGGCATCAAGTCGCATTGGTGCGGCACGTCCGTTTGCTGCCGTGGCACCAATACCGCTGCTTAAGGTAGAGAAGGAGGAGCCACTGGACGATTACGATGTGCTACTGGAATTTGCCAACTCCAATTCAAAGCAGCAGCAGACCCAATCGGGCACTACGTTTGTTGTGAATGCGGCAAGTTTTGCCTCGGCCGGATCCGTCTTTGCTGTCAATGCCGTCGGCAATGCGAATGCAAAGAAGGCAAACAATACGCAGGGCGAAGAATATATATTGCCCGATGATAACAATCTGGAAGTGGATGAAATTGTGATATCCTCCTCGTCTTCCTTTGCCTCCTCCTCTCAGCAACAACAGGAACAGACGCAACACCAGCACCACCATCAGCCAACGTCGACAACGCAGGCGCATTTGCAGCCTCCGCCAGGCTTCAATGATTTTAACTTTCTGTACCATCACCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATGCTGCTACACTTGCCTCATCCTCAAGCAATTCATCAGCATTGGATCATGATTCATCCATGAATGCCACATTTCGTGTGGATAGGCCACAGTCCACACTGGGCACGTGGTATCACGCCCATGATCAAGCCGAACCTCAATCACAGCAGCAACAACAACAGCACCAACAGGCATCAACATCCTCCTCGCATGGCCAGCAGCAGGTAGAGCAATCAAGTAATTTTATTGCCGCCTTGGCTGCTGTTGATTGTTGCAGCGTGGCGGCAGTTGATAGTGATGCTAGCGATGCCAAATATTTGGATTTGGATACGTGCAAGCGGGAACAATTGAGCAATAGCAGCAGCCATTTGCCATCGGTATCGGCCTCCACATCGACCACGTCCTCATCATTTGCTGCTGCTGCAACGGAAAGCAGTTTAGTCGGTGGTTTAGGTCTCAACATACGCACGGATGAGAAGATGCCAGCCAAAGGGGAAATATCTGAGCAGGAGAGCAATTGTGACATTGAAAACTCCTGGAGTCAATCGGTAGGTATGTACGGCGACATATCACAGCGTTACTTTAGAAATCAGTTCTCAGATGGGTACAATCAACAAATGGCCGATTGGCGTCAGGATTACTATCCGGCGCAAGATCTCAGTGGCCAGCAATCACAGCAGGAGCAGCGTGAGCACAAACGCACTTTTGATTTTAATGCCGTCGCTTCGGACTATGCCCAAGCGGGTGATCTGGACGCCTCTTCGAGCTCGGCGAGAAGCAACAATCATTTGTTAGATGCTCAACCCACCACCTCATCATCGTCATCGGCATTGCTGGCTGGTCCACCAATTGCCTCGACTTCTCGCGCCGCAGCCGAAGCAGAAGCAGCTGTTGCAGCTGCGTTGGCACAACGCAAACCGCCGCGTCGCAAGATCTACAAGTGCCCGCATTGTGTGGCTATCTTTGAAAAACTGAAGGAGCGCAATGCTCACATGATTGGCGAGCACAATTATGTGCGGCAGAATCGTCGTTTAATCTGTACACAGCCACTGGTTAGTGGCACAATTATGTCGCAGCCACATGATGCGCAACATCAGCAGGCGCAGCAATTATCTCTGCAACCGGAGTCAAACGATGTTGCTGTTCTGCAAGAGGATTCCAAGGATGGCATAGTGAAGATCAAGCAGGAACATTGTCAAGATAAGCAAGATACGTCAGGGCAGATGATAGATCAAATGGAGCTACCCGATGTGAAGGATGCCGATTTACTTGATGTGAACGGTTCAAACGGACGCGATGCCGACATGAAACCACCGACAAGCACCACTGAAATAGATCAGAAGCCAACAATGGCACCATTGGCAATTACCACACCTGCTGCCAAATTGGCGGCACTTTATCGCATGCTTATTTCCTACAATGAATCGAAACTGGGGCAGGAGCGTAACAATCTCAGCGAACTGGAGCAGAAGGCCATGGAGAAGTCCATATTTCTTTGCTATGTTTGTCGTACGGATTTCCCTTCGGTTAAACTCTACGACGCCCATTTAACGGAACATCCCGCCGAGTGTTTTACGTGCGGCAAGAAATTCTATCGATGGAAGAACTTCTCATTGCATCTGAAGCGTCATCTCGGCTGGAAGGAGTTTGGCTGCTATGTCTGTGACAAGAAGTTCGTGGTGCGCAGTGCTCTGGTTGAGCACATGCGTATGCATACGGGGCAGAGTCCACTCAAGTGCAAGATATGTGGCAAAAAATTCAAGCGTTATTCTAATTTAACGCAACATCGCAAGAGACACACCAAAATGATGGTGCGCAAAAAGGAATATGTCTGTCACTGCGGCGAAGTGCTGCCGTCGAAGGCACGTTTTCTGTGGCACAAGGAGACGCACGATCTGAAGCCTAAATGCTGTCCCTATTGCTGCGATCGTTTCGTGCACGCCAACTCGCTACGTCGCCATATACGACTGGCGCATTCGGATAAGTTTGACTATGCCGAGCCAATGGAGTGTCCCATGTGCAAGCAAATATTCGCCAAGACATCGATAAAGGCGCACATGGCAACGCACTCGACAGATCCGCAATACGATTGTGCTATCTGCAACAAAAGTTTCTCCACCAAATGGAATCTCAAAATACATTCGTGGGTGCATGCGAATCGCACCGCCAAACCCTTCAAGTGCGAGTACTGCCCCAAGGCATTTGTGCGTGAGCTGGACTTTAAGAACCATATGAATGCACACAAGCAGATCAAACCGTACACCTGTGAGTATTGTGGTTGCAAGTTCATACGCAAGTACAACTATATGCGGCATCGGCGGGAGCATCATGGCAACAAGAAGTTCACCTGCGATCAGTGCGACAAATCCTTCCATCGGCATTACTATCTGATTGAGCATCGGCGCATCCACACCGGGGAAAGGCCTTTCCATTGCACGATTTGTGGCAAGAGCTCCACCACGAAAACCAATCACAACAAGCATCTGAAGATTCATCATTCGCGCGATCCCTTCACAGTGGAGGTTTAA
- Protein Sequence
- MVESMQCPVCTLYLHAGMNLSDHLETHPKEQVIKALVQMTIVGNNVGGSSLATAVLSTAAGCGTADGGGSGGSGSTTSSTSSSALSLSLLSTAVDQPGHFAAQQQQQSPMKYAYTAHATLPPPPPPPLQLFAQQSTTTLSHQKPPPAYGAAIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVNLAPPSGKHSKIHTDIFLNPPPPPPPQSTLPTTSSASSTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLSNTSTGRNMSSRQSTNSPFGALLNAAAQAAYVPPATGAPSVLRYAESPVAHYLERDNGDFIVQETPKHIVECVEKEDGQFSVIERIYQSPPSVLHIXXXXXXXXXXXXXXSEDKVHNWTHSEDEDQSKVSHSHVEDGDDEREDSRSRVGIKQTTKRTSRKTKSGGRISKRTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNASSAVHATSSSSSSSQHLSTAPSTSAAAAAAANSGASSAAGSSSGATKSKKNRVTVLSDVPLNMNEYLDLVGNIVASSRIGAARPFAAVAPIPLLKVEKEEPLDDYDVLLEFANSNSKQQQTQSGTTFVVNAASFASAGSVFAVNAVGNANAKKANNTQGEEYILPDDNNLEVDEIVISSSSSFASSSQQQQEQTQHQHHHQPTSTTQAHLQPPPGFNDFNFLYHHQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAATLASSSSNSSALDHDSSMNATFRVDRPQSTLGTWYHAHDQAEPQSQQQQQQHQQASTSSSHGQQQVEQSSNFIAALAAVDCCSVAAVDSDASDAKYLDLDTCKREQLSNSSSHLPSVSASTSTTSSSFAAAATESSLVGGLGLNIRTDEKMPAKGEISEQESNCDIENSWSQSVGMYGDISQRYFRNQFSDGYNQQMADWRQDYYPAQDLSGQQSQQEQREHKRTFDFNAVASDYAQAGDLDASSSSARSNNHLLDAQPTTSSSSSALLAGPPIASTSRAAAEAEAAVAAALAQRKPPRRKIYKCPHCVAIFEKLKERNAHMIGEHNYVRQNRRLICTQPLVSGTIMSQPHDAQHQQAQQLSLQPESNDVAVLQEDSKDGIVKIKQEHCQDKQDTSGQMIDQMELPDVKDADLLDVNGSNGRDADMKPPTSTTEIDQKPTMAPLAITTPAAKLAALYRMLISYNESKLGQERNNLSELEQKAMEKSIFLCYVCRTDFPSVKLYDAHLTEHPAECFTCGKKFYRWKNFSLHLKRHLGWKEFGCYVCDKKFVVRSALVEHMRMHTGQSPLKCKICGKKFKRYSNLTQHRKRHTKMMVRKKEYVCHCGEVLPSKARFLWHKETHDLKPKCCPYCCDRFVHANSLRRHIRLAHSDKFDYAEPMECPMCKQIFAKTSIKAHMATHSTDPQYDCAICNKSFSTKWNLKIHSWVHANRTAKPFKCEYCPKAFVRELDFKNHMNAHKQIKPYTCEYCGCKFIRKYNYMRHRREHHGNKKFTCDQCDKSFHRHYYLIEHRRIHTGERPFHCTICGKSSTTKTNHNKHLKIHHSRDPFTVEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01558467;
- 90% Identity
- -
- 80% Identity
- -