Zgab002724.1
Basic Information
- Insect
- Zaprionus gabonicus
- Gene Symbol
- retn
- Assembly
- GCA_018903695.1
- Location
- JAEIFO010000401.1:20481627-20501015[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-26 8.9e-23 80.3 0.0 2 89 363 448 362 448 0.96
Sequence Information
- Coding Sequence
- ATGTGGAGACGCGCAACTTGTGAGTTGCAACTTGTGACTTGCCCTGCCCCATGCTCCCTATCCCAGCCCGGGCCTGGCCCAGCCCGGCCTGGGCACTTCTCATTTAATGGCCTCGCGCTCAGCTGGACTGGATGCCATTACCGGTCCCACGGCGATCGAACTGATGACGAGATGCGCGACTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGCGGGCCTCAACTTTGCCAGTCCCGAACAGCAAACAGAACTGTCTCTCAGCCACCATCATCAATTGCCCCCGAATCATCCGCTCAATGCACTGGGCAGCTTCATGGGCATTGGGGGGCTACACAGCATTCCAAATCTGCAGCATAGCGATGTCCTGGAGAAGCTTAAGATGCAGGTGCGCGACATGAAGGTGGGCCTAATGGAACAGGATTACGCTGCAGCAGCGCATGCGGCAGCCTTTGGAGTGAACATGTTGCCCACCACGATCAGTTCGGCCTTTCCGTTGCCCCACAATTCGGTGGCAGCAGCAGCAGCGGCAGCCACATTTGGACATGCTGCAGTGCAAGCGCCGTCGGTGCAGTCGGCCAGCAATGGAGGTAGCTACAATGGAGCTGGAGCGGGAACAGGAGCAGGTACAGGAGCTGGAGGAGCAGCGGGCACAGGAGCAAGTGGCACAGGCACAGGAGCTTCTGCAAACAGTGGTGCAGGTGGAGGAGGTACCGGAGGAGGAGGAGGTGGTGCTGGAACTGGAGCTGGCAATACCAACAGTACTAACAGCGCCAACAATGGCCACGCCTTCTCGTTTGCATCGCCCACCGCGCCCAGCGCCAAAGAAGCACGCCAATTTACAGCTAATTCCGCATCGAACTCATCGACATCCAGCGAGGCATCCAACTCGTCGCAACAGAATAATGGCTGGAGCTTTGAAGAGCAGTACAAACAAGTCAGACAGCTCTACGAAATCAACGATGATCCCAAGCGCAAGGAGTTTCTCGATGATTTGTTTTCGTTTATGCAAAAGCGCGGCACGCCCATCAATCGACTGCCGATAATGGCCAAATCGGTGCTGGATCTATATGAGCTATATAATCTGGTTATAGCGCGCGGCGGCCTTGTCGATGTGATCAACAAGAAGCTATGGCAGGAGATCATCAAGGGGCTGCATCTGCCGTCGAGCATCACCAGTGCCGCATTCACGCTACGCACCCAATACATGAAGTACTTGTATCCATACGAATGCGAGAAGAAGAACCTCAGCACACCAGCGGAGCTGCAGGCGGCCATCGATGGCAATCGCCGTGAAGGACGTCGCTCTAGCTATGGACAGTACGAGGCTATGCACAATCAGATGCCATTGACACCCATTTCACGCCCCTCGCTACCCGGTGGCATGCAACAGATGTCCCCGCTGGCGCTGGTCACACACGCCGCTGCAGCCAACAATCAACAGGCACAGGCAGCAGCAGCGGCAGCAGCAGCGCATCGTCGCCTGATGGGCGGCCCCGCCTTCGGGCAGATGCCGAATCTGGTGACACAAGAGATCGAGAATCGCATGATGGAGTATCTACAGCTCATACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTCAGTGCGCAGGTGGCACTGTGGCAAATGTACCATAACAGCAGCCCAACCGGTTCGGCACACACCTCACCACAGCAACGCGAAGCTTTGAACCTATCCGACTCACCGCCCAATCTCAACTTAAGTCACATCAAGCGAGAACGTGATCGTGATCCTACGCCTGAGCCAGCGGATCACGAGGAGGCACCACCGCCAGCAAAGCGTGTGGGCAGTGGCCTGATGCCACCAGGTTTTCCTGCCAATTTCTATTTGAATCCACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTACGGGGCGGGAGAGCACAACATCACAGGCAACTCTTCGTCGCTGCAAGATGACAGTGAACCACAGCAGCTGAACGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGGACAAGTCTGATGATTCTGCCATCGAGAACTCACCCAGCACATCCAACACAACCGCCGCATCCGCTTCGGGTGGAGGCAATCGACACAGTTCGCCTGTGTCCACCAAGAAGAAGAGCAACTGCAGCAGCAAACAAACACAGTCCAGCAGCAGCAAGGAGCAGCAGCAGAAGGCACAGCAGGAGGTGGGAGGTGCAGCAGTTAAGCTGAATCCGCTAGAGACACTCAGTCTGCTCTCAGGCATGCAATTCCAAGTGGCACGCAATGGCACCGGTGCAAATGGTGAACAACAGTTGATTGTGAACCTGGAGCTGAATGGCATCAAATACACTGGAGTGCTGGTGGCCAATGCAGCAGGAGCAGCACATGGTGGCAACAACGATGATGATGAGGAGGAGGAGGAGGCACAGCATGAGGAGGCAACAGCAGCTGACAAGTGTGAGGCGGAGCAGTCTTCACCACGCTCTGATGTGGTGAAGTTGGAGAAGCGTCAGGAAATGAACCAACAGGAGGCACACGACGAACAGGTTGAGACGCCACCATCGCCTCCACTGACCGATAAGAATGGTGCGGGGGAAAATGAGACGGCAACGAGTGTGGGTGCACTGGGTATGGGGGGCGTGGTAGGCGGAGTAGCCGTAAATATGCTAAAAGATGCTGTGGTCAGTTCGTAA
- Protein Sequence
- MWRRATCELQLVTCPAPCSLSQPGPGPARPGHFSFNGLALSWTGCHYRSHGDRTDDEMRDCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGLNFASPEQQTELSLSHHHQLPPNHPLNALGSFMGIGGLHSIPNLQHSDVLEKLKMQVRDMKVGLMEQDYAAAAHAAAFGVNMLPTTISSAFPLPHNSVAAAAAAATFGHAAVQAPSVQSASNGGSYNGAGAGTGAGTGAGGAAGTGASGTGTGASANSGAGGGGTGGGGGGAGTGAGNTNSTNSANNGHAFSFASPTAPSAKEARQFTANSASNSSTSSEASNSSQQNNGWSFEEQYKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKNLSTPAELQAAIDGNRREGRRSSYGQYEAMHNQMPLTPISRPSLPGGMQQMSPLALVTHAAAANNQQAQAAAAAAAAHRRLMGGPAFGQMPNLVTQEIENRMMEYLQLIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAQVALWQMYHNSSPTGSAHTSPQQREALNLSDSPPNLNLSHIKRERDRDPTPEPADHEEAPPPAKRVGSGLMPPGFPANFYLNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYGAGEHNITGNSSSLQDDSEPQQLNGXXXXXXXXXXXXXXXXXXXXXXXXXLDKSDDSAIENSPSTSNTTAASASGGGNRHSSPVSTKKKSNCSSKQTQSSSSKEQQQKAQQEVGGAAVKLNPLETLSLLSGMQFQVARNGTGANGEQQLIVNLELNGIKYTGVLVANAAGAAHGGNNDDDEEEEEAQHEEATAADKCEAEQSSPRSDVVKLEKRQEMNQQEAHDEQVETPPSPPLTDKNGAGENETATSVGALGMGGVVGGVAVNMLKDAVVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01558811;
- 90% Identity
- -
- 80% Identity
- -