Basic Information

Insect: Zaprionus davidi
Gene Symbol: -
Assembly: GCA_018903715.1
Location: JAEIGL010000004.1:1944559-1947009[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 6.5 4.5e+02 1.5 5.0 2 23 241 263 240 264 0.93

2 10 0.051 3.6 8.1 2.3 6 23 272 289 271 289 0.98

3 10 0.00012 0.0086 16.3 2.8 1 23 295 318 295 318 0.93

4 10 0.00014 0.0096 16.2 2.3 1 23 326 348 326 348 0.97

5 10 6e-05 0.0042 17.3 0.4 2 23 354 376 353 376 0.96

6 10 0.13 8.9 6.9 0.1 2 23 382 403 381 403 0.95

7 10 0.55 38 4.9 4.4 2 23 412 433 411 433 0.91

8 10 8.7e-05 0.006 16.8 0.9 2 23 441 463 440 463 0.95

9 10 5.7e-06 0.0004 20.5 1.7 1 23 469 491 469 491 0.97

10 10 0.0009 0.063 13.6 8.9 1 23 497 520 497 520 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	6.5	4.5e+02	1.5	5.0	2	23	241	263	240	264	0.93
2	10	0.051	3.6	8.1	2.3	6	23	272	289	271	289	0.98
3	10	0.00012	0.0086	16.3	2.8	1	23	295	318	295	318	0.93
4	10	0.00014	0.0096	16.2	2.3	1	23	326	348	326	348	0.97
5	10	6e-05	0.0042	17.3	0.4	2	23	354	376	353	376	0.96
6	10	0.13	8.9	6.9	0.1	2	23	382	403	381	403	0.95
7	10	0.55	38	4.9	4.4	2	23	412	433	411	433	0.91
8	10	8.7e-05	0.006	16.8	0.9	2	23	441	463	440	463	0.95
9	10	5.7e-06	0.0004	20.5	1.7	1	23	469	491	469	491	0.97
10	10	0.0009	0.063	13.6	8.9	1	23	497	520	497	520	0.98

Sequence Information

Coding Sequence: ATGATTTGCCGTCTGTGCCTGAACAGCGCCAACGACACCATACAAATATTCGAAGGTGTTGGCTTGTCCCTGAACGTTGCCGTGGTGCTGGCCAAATACTTTTGGTTTCAGCCCAAAAGCGATGATCCCATATCGACAGAGATCTGCGTTGGTTGTTGGACACGTGTCAACGACTTCAACGAGTTCTACACGAGTGTGGAAAAGGCGCATCGTTTGCTCACCGAACGCTTCTCGTTGAAAGGAGGTGAGCAGCAGGAGAAGCTCCCGGCGAGCAGCCCGAAGCAGGAGCAGCCAAGCGATGAGGCCAAAGAGTTGTCTGACGATGACTTCATCGGGCAGGATGAGGCGCTGTATGTGGCGAGCGGCGGTGAGAGCGAAGCAGCGGCCTCCTTCAGCAATGAACAGTTCCTCAACGATGTGCTGGCCACGCAGCAGCCAAGTGAGAAGTGTGAGGAGCAAGTGCCACAGCTGGAAGCACAGCCTGAGCGCCGTGAGACACGTGCAACACGTGCCAAGAGCAAAGCCATGAATGAATCTCTGCCGTCGCCAGCTGTGAAAACATCGACCACGCCCGTTGTCAAACGACGTGGCAGATCGAAGTCAGAAAAGTCCAGCAAGGAAGTCAGCAGCATGGAGGAGGTGCCAAAGAGCAAGCGCTATGTGGACTACAAGAAATCCATGTTGGAGATTGATGCAAAGATAGCAAAGCACATGCGGCTCACCTGCAACGTGTGCCACGAAGTGCAGGAGACCTTTCTGCTGCTCTGCAAGCACATGATGCAGACGCATCACTGCAAGGGCTACGCCATGTGCTGCAACAAGAAGTTCTACAAGCGTTCCTTTCTCACCGATCACATTGATCGTCACTCGAATCCCGAGAAGTTTAAGTGTGATCTGTGCGACAGAACCTTTGCGGACAAGCAGTGCCTGCGCAACCATGAGCTGCTAAAGCATCAGCCGGATGAGCAGAAGATTTTCATGTGCGAGCACTGCCCCAAGCGCTATACCAAGCAGTATTTGTTGGATCAGCATCGCATCATACACAAGGAGCGCAATGTGCCCTGCGATATATGCGATAGACGCTTTCCCAACGTATCCATGCTCTGCACGCATGTAAAGATGGTGCACGGCAATTATGGCACCATGTGCGACATCTGTGCGCAGGTCATACGCGGACGTGCTGCCTTCCAGCGTCATCAGCTGGAGCACGCTGGCATTACAGAGCCCAAGGTGCAGTGTGATATCTGTGGTTCGTGGCACAAGAACAAGTACAGTCTGAAGAAGCATGTGCGCCGGCACAATGGTTCCTCCGAGGAATGCACCTGCAACATCTGTGGCAAAGTCTCCCCTAATCGTAGTGCGATGCTCAGTCATCAACGCTATGTGCACAACGCTGATCGTGTGCATGTGTGCAGTGTGTGCTCCAAGAAGTTCAAGAAGGCCATCAATCTCAAGGAGCACATGGCCACGCACACTGGCGAGGTGCTCTACAAGTGTCCACACTGTCCCAAGACCTTCAATTCGAATGCGAACAAGCATTCGCATCGCAAGAAGTGCCATCCCAAGGAGTTCGAGGAGGCGCGCAAGGCACGCATGCAGAATCGCATGGCACCCGTGCAGGCAGGGGAAACCAAGTCCAGTTTGATTACCATCACCACCACTGGCGACACAGATGGGCAGCTGGAGACGCACAACATACTTGTGACCACAACGGAGGACACTGAGGATCAGGAAGGGTTTAAGGGTGAAGAGATTGACTTTATGCTCTCGCTCAGTCCGCAGCCGGCGACGGAGTAA
Protein Sequence: MICRLCLNSANDTIQIFEGVGLSLNVAVVLAKYFWFQPKSDDPISTEICVGCWTRVNDFNEFYTSVEKAHRLLTERFSLKGGEQQEKLPASSPKQEQPSDEAKELSDDDFIGQDEALYVASGGESEAAASFSNEQFLNDVLATQQPSEKCEEQVPQLEAQPERRETRATRAKSKAMNESLPSPAVKTSTTPVVKRRGRSKSEKSSKEVSSMEEVPKSKRYVDYKKSMLEIDAKIAKHMRLTCNVCHEVQETFLLLCKHMMQTHHCKGYAMCCNKKFYKRSFLTDHIDRHSNPEKFKCDLCDRTFADKQCLRNHELLKHQPDEQKIFMCEHCPKRYTKQYLLDQHRIIHKERNVPCDICDRRFPNVSMLCTHVKMVHGNYGTMCDICAQVIRGRAAFQRHQLEHAGITEPKVQCDICGSWHKNKYSLKKHVRRHNGSSEECTCNICGKVSPNRSAMLSHQRYVHNADRVHVCSVCSKKFKKAINLKEHMATHTGEVLYKCPHCPKTFNSNANKHSHRKKCHPKEFEEARKARMQNRMAPVQAGETKSSLITITTTGDTDGQLETHNILVTTTEDTEDQEGFKGEEIDFMLSLSPQPATE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01553461;
90% Identity: iTF_01555635;
80% Identity: -