Basic Information

Insect: Zaprionus capensis
Gene Symbol: -
Assembly: GCA_018903675.1
Location: JAEIFN010000605.1:5917157-5919191[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0015 0.1 12.9 0.4 2 23 392 414 391 414 0.94

2 7 0.069 4.9 7.7 9.3 1 23 422 445 422 445 0.97

3 7 1.2e-07 8.4e-06 25.8 0.9 1 23 450 472 450 472 0.98

4 7 6.1e-05 0.0043 17.3 0.5 1 23 481 504 481 504 0.91

5 7 0.00021 0.015 15.6 0.7 1 23 510 532 510 532 0.98

6 7 4.1e-05 0.0029 17.8 1.8 2 23 539 560 538 560 0.96

7 7 0.00092 0.066 13.6 0.4 2 23 566 588 565 588 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0015	0.1	12.9	0.4	2	23	392	414	391	414	0.94
2	7	0.069	4.9	7.7	9.3	1	23	422	445	422	445	0.97
3	7	1.2e-07	8.4e-06	25.8	0.9	1	23	450	472	450	472	0.98
4	7	6.1e-05	0.0043	17.3	0.5	1	23	481	504	481	504	0.91
5	7	0.00021	0.015	15.6	0.7	1	23	510	532	510	532	0.98
6	7	4.1e-05	0.0029	17.8	1.8	2	23	539	560	538	560	0.96
7	7	0.00092	0.066	13.6	0.4	2	23	566	588	565	588	0.96

Sequence Information

Coding Sequence: ATGGTTATTTGTGGAACTCTTCTCGTTCGCAACAACAATTTTGAAGAGTTCTTTTTATCCTGTTCCCATGGCCAAAGTGGCTGCGACGTAGAAGTAAAACTTGAGAATTGGAAGGAATTTGTTTTGCATATAAAAAATGTACACGAGGCGGAAATCTTAGAGGACAGTTTGTCCAGCATTGAGTTTAAGTCGGAGCCGTTGCCAATAAACGAGTTTGAAGCCGAAATTGATGAGGATATCAATTCTGATGCTGAGGACAATGAGGATTGTCTGGCCGAGGCGGCGTTTGTAGATCTGGACATCATATCGGGAGACGAAGATGAAGACGTTGACATAGAATGCGATTTCGATTATGATGATGAAGATGATGATGAAGAGAGCGGTCCATCGATGTCAGTCGATTGTCAATTGGATGAACAATCCCAGACAAAGTCTAAGAATGGAACGAGTAACTTTACACCCACAGCTAAATTTAATCCCACATTCTACCGCCGCAATCCTCGGATCACACAATTCATTGAGCTGTACAAGGGGCAGCCTTGTCTGTGGGATCCCAAACACGCATCATACAAGAACAAGGAGAAACGCAGTGCAGCATATGTGACATTGCTGGAACAGCTAAAGAGTACCATAAATGTTCATCTCACTCCGTTTAAGCTGAAGAAGTGCATAGCTAGTCTGCACAGTCAATATGCGACTATAAGTCGTCAGAAGCGGACCAAGAAGCTGACGAAGTTACCTCTGTATTATCATGAAATGTACAGTTTCCTTGGGAAGCGCAGTGATGTGGACGATACGATGGATAGTGATGAGGACAGTGATGATAATAAAATTAAGTTGATTTTTACGGAGACTAACAAGTTGACAAGCTACTTTATAGAGCTATATTCCAAGTTCCCTCAGCTGTACGATCCTGAGCACAAGGACTTTGCCAATTTGAATGTCCGGCTAGGCGCCTACTTGGAAATGACTGATCTGCTGACGGCAGAAATCTCGATGGGCATCATTACGCACTACGATGTCTACGATAGCGTGCTTTTCCTGCGACAATGGTACTCGAGGAAAATCAAAGGACTCACCGAAACCCAGACTGTCGGCCTATTGAAGGCTGAGAAACGTTACATTGACACCTGCAAGAGTTTCCTGCGAACGAAAACATTCCGACTGAGTTTGCCTTGCGACATGTGCAAGGAGAGTTTCGGCACAGATCACGCACTGCAGGCGCACCAGTTTCGAGCCCATAAGGTGGGTAAAGGTGGCTGGTTTAAGTGCATGTTCTGTGAGACGCATTTCGAGCGACGTTGTCATCTACAGCAGCACACCCAGCGTGTGCATATGGGAAAAACCTTCAGCTGCAACATTTGTGAGCGGAGTTTTGCCTTCTCTAGCCAGCTAAGAGCACATCTACGCACCCACGACGAGGCACATGTGGCCAAACCGTTTGTGTGTGAATTCTGTGGCAAATCCTTCAAACAAAAGATCCAGATGAGCACCCATGTGACGGCAGTGCATACAAAAATTCGGGCATTCAAGTGCTCTATGTGCCCCAAAGATTTCCTCACGAATCGCGACCTCAAAGATCACATTAAAGCGCATCTTAATATACGTGACAAGGTATGTGAGACTTGCCAGAAGACGTTCACAAATGCAAATGCTTTGATCAAGCATCGACATATCCACAAGGAGAAGACGTTACAATGCAGCCTCTGCAATACAAGGTTCGCAGAGCGCGTAAGTTTGGGGGTTCACATGAAGCGAACGCACAAAATCATTCGAAATAATGTTAAAGTTTCAGCTTCGGAAGCAACAGAGTCCGCATTTCCAGAAACCGAAAACTTTTCAAATAAATAA
Protein Sequence: MVICGTLLVRNNNFEEFFLSCSHGQSGCDVEVKLENWKEFVLHIKNVHEAEILEDSLSSIEFKSEPLPINEFEAEIDEDINSDAEDNEDCLAEAAFVDLDIISGDEDEDVDIECDFDYDDEDDDEESGPSMSVDCQLDEQSQTKSKNGTSNFTPTAKFNPTFYRRNPRITQFIELYKGQPCLWDPKHASYKNKEKRSAAYVTLLEQLKSTINVHLTPFKLKKCIASLHSQYATISRQKRTKKLTKLPLYYHEMYSFLGKRSDVDDTMDSDEDSDDNKIKLIFTETNKLTSYFIELYSKFPQLYDPEHKDFANLNVRLGAYLEMTDLLTAEISMGIITHYDVYDSVLFLRQWYSRKIKGLTETQTVGLLKAEKRYIDTCKSFLRTKTFRLSLPCDMCKESFGTDHALQAHQFRAHKVGKGGWFKCMFCETHFERRCHLQQHTQRVHMGKTFSCNICERSFAFSSQLRAHLRTHDEAHVAKPFVCEFCGKSFKQKIQMSTHVTAVHTKIRAFKCSMCPKDFLTNRDLKDHIKAHLNIRDKVCETCQKTFTNANALIKHRHIHKEKTLQCSLCNTRFAERVSLGVHMKRTHKIIRNNVKVSASEATESAFPETENFSNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01554177;
90% Identity: iTF_01557042; iTF_01555618; iTF_01554177; iTF_01558530; iTF_01557783; iTF_01551952; iTF_01550487; iTF_01559936; iTF_01552668; iTF_01549075;
80% Identity: -