Basic Information

Insect: Zaprionus capensis
Gene Symbol: -
Assembly: GCA_018903675.1
Location: JAEIFN010000605.1:5912803-5914648[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.046 3.3 8.2 0.5 2 23 363 385 362 385 0.94

2 7 4.1e-06 0.00029 21.0 0.5 1 23 392 415 392 415 0.98

3 7 1.2e-06 8.5e-05 22.7 2.4 1 23 420 442 420 442 0.98

4 7 0.00019 0.013 15.8 0.2 3 23 449 470 448 470 0.91

5 7 1e-05 0.00072 19.8 0.7 1 23 476 498 476 498 0.99

6 7 9.4e-05 0.0067 16.7 3.3 3 23 506 526 505 526 0.97

7 7 7.4e-05 0.0052 17.0 0.7 1 23 532 555 532 555 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.046	3.3	8.2	0.5	2	23	363	385	362	385	0.94
2	7	4.1e-06	0.00029	21.0	0.5	1	23	392	415	392	415	0.98
3	7	1.2e-06	8.5e-05	22.7	2.4	1	23	420	442	420	442	0.98
4	7	0.00019	0.013	15.8	0.2	3	23	449	470	448	470	0.91
5	7	1e-05	0.00072	19.8	0.7	1	23	476	498	476	498	0.99
6	7	9.4e-05	0.0067	16.7	3.3	3	23	506	526	505	526	0.97
7	7	7.4e-05	0.0052	17.0	0.7	1	23	532	555	532	555	0.97

Sequence Information

Coding Sequence: ATGGAAACTGAAACCTGTGGCTATATTATGAGCAGGGGACCAGATTTGGATAGTTTCCTAATGCGTTGTTCACAGTGTACGATAGACGTGGAGATTGACAAATGGCAAGAGTTTGTTTTACACTTTCGTAATACGCACGGTTCCCCAGCCCCACAGAAGGAGGATAGTTGCTTACAAATAGAGGAGATTGTAGTTAATGAAAGCTTTATCAATGAAGAGGTCATAAATGCCTTACCAGAAGCAGAGGAACAGCAGTTACAATCTGAGCCTGAAATATCGAGACCTTGCTCCTCCATTTCGGAAACAAGTTTAAGTGAGAACGAGTCAATTGGAACGATGAGTGAATCCTATGCTCAATTTGCAGAGGAAGCAGAACAAGACATACAAGAACAGGCTTCGACTACGCTTACCTATAGGTTCAATCCATCCTTTTTTCGACGGGATCCACGAACATTACAGTTCATTGAGTCATATAAGAGTCAGCCCTGTCTATGGAATCCTGGTGTGAGCAAATATAAAGATCCCTTTGCATGCAAAGCAGCCTATCAACAACTCATCAAGGAACTGGAAAGCAAGATCAGCGTATTGTTTTCAGAATATTCTCTTAGGACAGCCATCAAAAAGTTACACATTCAATATAACACTGTGGAAAAGAGGGTTGTGAACGGCAGCCAAAAGCCTAATTCGGTTGCCTTCAATCACTATATAAGCTGTAGCTTCCTAAAGGAATGTAAAGATCAAACGAATTCTTATAGAAATAACATAATGCAGTTGGATTTTGCGAAAAGGAATAAACCTACTTCCGACTTTATAGGGCTTTATTCTAACTTTCCGCAGCTATACGACAACAAGCACAAGGATTTCTCAAGCATGAGTTGTCGCAAACAGGCCTACGAGTTGATGACAGCCGAAGCTAGAGTCCATCACGCGGATTTGAGCACCGACGATATATATTTAGCCATACAGTGCCTACGTCAATGGTATTATAAGAGCACAAAGCATGCGATTAAAGCGACAAATGAGTCGGAAGAGTATTATTTGAAAGCGTGCTCGTTCCTGCCATCGAAAATGTTCAAGCAAAAGCTAATCTGTGAGATATGCCAGCAAGAAACGTCCTCAGATCATGTACTACAGGCACACATGTACAAGACGCACAACATCGGTGAGTTGCCCTTCAAGTGCACCATGTGTGATCGCAGTTTTACTGGACGCGGTGACCTGGGGACGCATATGCAACGTGTTCATATTGGAAAGACTCACAAGTGTCAGTACTGCGAAAGGACATTCGCTGTTAACTCGGATCTGAGTCTTCATATGCGCACCCACACTGGGAATAATATTCTGTGTGAACTGTGCGGCAAGGCCTTCCGATTGAGATCACAGTTAAAGCTGCATGTAACAGCAATACATACGAAAATCAGAGCATTCAAGTGCACCATGTGCCCAAAGGATTTCATAAAGAAGGTCGACCTGTCGGATCACATTAAGAGCCACCTTAACATACGAGATAAAATCTGTGCAACATGTGGTAAGGGATTCACCAGTTGCCACTCACTTATCCGGCACCGCCAGATACACGCGGAAGTAAAGAAATTTGCCTGTAAATTATGTGATGCCCGGTTCTCGCAGTTCGTTGGCCTTAACTCACATATGAAGCGAACGCACAATATTATTCGCAGCAATGTACAAAAACAAGCAGAGACTATAATTACCGAACAATCGATTAGTTGA
Protein Sequence: METETCGYIMSRGPDLDSFLMRCSQCTIDVEIDKWQEFVLHFRNTHGSPAPQKEDSCLQIEEIVVNESFINEEVINALPEAEEQQLQSEPEISRPCSSISETSLSENESIGTMSESYAQFAEEAEQDIQEQASTTLTYRFNPSFFRRDPRTLQFIESYKSQPCLWNPGVSKYKDPFACKAAYQQLIKELESKISVLFSEYSLRTAIKKLHIQYNTVEKRVVNGSQKPNSVAFNHYISCSFLKECKDQTNSYRNNIMQLDFAKRNKPTSDFIGLYSNFPQLYDNKHKDFSSMSCRKQAYELMTAEARVHHADLSTDDIYLAIQCLRQWYYKSTKHAIKATNESEEYYLKACSFLPSKMFKQKLICEICQQETSSDHVLQAHMYKTHNIGELPFKCTMCDRSFTGRGDLGTHMQRVHIGKTHKCQYCERTFAVNSDLSLHMRTHTGNNILCELCGKAFRLRSQLKLHVTAIHTKIRAFKCTMCPKDFIKKVDLSDHIKSHLNIRDKICATCGKGFTSCHSLIRHRQIHAEVKKFACKLCDARFSQFVGLNSHMKRTHNIIRSNVQKQAETIITEQSIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01553454;
90% Identity: iTF_01549066;
80% Identity: -