Basic Information

Insect: Zaprionus capensis
Gene Symbol: L
Assembly: GCA_018903675.1
Location: JAEIFN010000605.1:9765872-9775239[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 9.5e-06 0.00067 19.8 2.9 1 23 172 194 172 194 0.98

2 17 0.33 23 5.6 6.2 1 23 200 222 200 222 0.97

3 17 1.6e-07 1.1e-05 25.4 3.2 1 23 228 250 228 250 0.99

4 17 1.2e-05 0.00082 19.6 0.4 1 23 256 278 256 278 0.99

5 17 0.065 4.6 7.8 0.1 2 23 363 387 362 387 0.91

6 17 0.0052 0.37 11.2 1.1 2 23 416 438 415 438 0.95

7 17 0.057 4.1 7.9 0.7 1 23 522 544 522 544 0.97

8 17 0.0032 0.23 11.9 0.1 2 23 552 573 551 573 0.92

9 17 0.00043 0.03 14.6 0.1 1 23 581 606 581 606 0.92

10 17 4.8 3.4e+02 1.9 1.6 2 23 642 664 641 664 0.95

11 17 0.0024 0.17 12.3 1.1 1 23 715 738 715 738 0.97

12 17 0.0046 0.33 11.4 1.2 2 23 919 941 918 941 0.96

13 17 0.11 7.6 7.1 0.1 1 23 947 969 947 969 0.92

14 17 0.95 68 4.1 1.6 2 23 977 998 976 998 0.96

15 17 0.69 49 4.5 0.5 2 23 1099 1120 1099 1120 0.94

16 17 0.033 2.4 8.7 0.0 1 23 1130 1152 1130 1152 0.96

17 17 0.0002 0.015 15.6 1.2 1 23 1157 1179 1157 1179 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	9.5e-06	0.00067	19.8	2.9	1	23	172	194	172	194	0.98
2	17	0.33	23	5.6	6.2	1	23	200	222	200	222	0.97
3	17	1.6e-07	1.1e-05	25.4	3.2	1	23	228	250	228	250	0.99
4	17	1.2e-05	0.00082	19.6	0.4	1	23	256	278	256	278	0.99
5	17	0.065	4.6	7.8	0.1	2	23	363	387	362	387	0.91
6	17	0.0052	0.37	11.2	1.1	2	23	416	438	415	438	0.95
7	17	0.057	4.1	7.9	0.7	1	23	522	544	522	544	0.97
8	17	0.0032	0.23	11.9	0.1	2	23	552	573	551	573	0.92
9	17	0.00043	0.03	14.6	0.1	1	23	581	606	581	606	0.92
10	17	4.8	3.4e+02	1.9	1.6	2	23	642	664	641	664	0.95
11	17	0.0024	0.17	12.3	1.1	1	23	715	738	715	738	0.97
12	17	0.0046	0.33	11.4	1.2	2	23	919	941	918	941	0.96
13	17	0.11	7.6	7.1	0.1	1	23	947	969	947	969	0.92
14	17	0.95	68	4.1	1.6	2	23	977	998	976	998	0.96
15	17	0.69	49	4.5	0.5	2	23	1099	1120	1099	1120	0.94
16	17	0.033	2.4	8.7	0.0	1	23	1130	1152	1130	1152	0.96
17	17	0.0002	0.015	15.6	1.2	1	23	1157	1179	1157	1179	0.97

Sequence Information

Coding Sequence: ATGATGGCCCTAAAGATGTTGTATCGCGGTCCCAGTTCGCGTTTGGAGAATTTAATCGAAAAGATTCAGGCAACGAAGGAGATTACGAACAACGACATGTACAGCACGCACACCTCGTCCAGTTACTCGCCCAGTATCTCGGACGGCACTTTGACGCCCAACTCACAACAACAACAGCAACCACAGCAGCAGCAGACACATTCACATCCACTGGGCGAAGATGCCGCCACGGAGGAGTCCAAGGCGAATGGCGACACGGCAGACAGGGAGGCCGCCAGCAAGGTGGGGAAGCGTCCCGGCCACGCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAAAATCAATAAGGAGGCGAAGCAAGCAGGCGTGGCAGGAGCAGGCACAGCCGGAGCTGCTGCAGGCGCAGGCGGAGGCGGAGCTGGCCACAAGTTTGATAAGTTGACAGGCGAAGGCATTAAGAGTCGAGGCGACGGCTCCTATCAGTGTCAGTTCTGTGATAAGTCATTTCCGCGCCTCGGTTACTTGAAGCATCACGTGCAGAGCCACGCCGAGCATTTGCCCTTCAAGTGCGAGTACTGCGCCAAGCTGTTCAAGCACAAACGCTCCAGGGATCGCCATAAGAAGCTGCACACCAACGAAAGGAACTACAAGTGTCCACACTGTGAGGCGGCTTTCTCCAGAAGCGATCACTTGAAGATCCACATGAAGACGCACGACATCCAGAAGCCCTTCCAGTGCAGCATGTGCAATCGTGGCTACAACACCGCCGCCGCCCTCACCTCGCACATGCAGAAGCACAAGAAGAACGCTGCCATACTGGCAGCAGGTGGCAACCCCAACGCACTCAACTACAGTCCCCGATCGACGGGCTCCGCCTCGATCTCCTCCAACGGCAGCCTGCACAAGCGACGCTATGCGCTGGCACTCGCCTCCGACAGCAGCCCGAGTCGCCTGGAGTTCCCCCCCAAGCGGGCACGTGCCGCCAGCTCAGCTGTGCCCAGCACGCCCACAACCACGCCCACACCCACACCGAATGCAGTGCAACTGCTGCGCTGCAGCTACTGCCCCAAGGCGACGGAGTTTGCCAGCCTGGAGCAGCTGAATGCGCATCTGCAGTTGGCGCACGACTCGCAGCAGGCGAGGAATGGCGCAGGGGAGTCGGGGAGTGCAGCAGAGCAGAGCAGTGCAGCAGGCAATGGCTTTCAGCTGAGCTGCGAATACTGCACCATGAGGTTCCACAACATTGCCGGCCTGTTCCAGCACATGCGGGCCACGCACTTGGATCGCCTGAGCAGCCCCAACTCGTACTACGAGCACTTCAATCGCCTCGCCACGGCGGGCACCTTCAGTCCGCGGCTGGCCCTGGAGCTGCCCAAACAGCTCAAGCAGGACTTGGCCAGTCCGCAGAGAACGGAGCAGCAGCAGCAGGATGTGCCCACCGATCTGAGCAGCAACAAGCGACGCACATTGACACCAACAGGAGGGGGAGGAGGAGCGCCACAGCCACCACCTGCGCCACCTGGCATCTTCTTCTGCAATCAGTGCAACGCTGGCCTGCCCGACTTCGAGAGCTTCCGCAATCATCTGAAGAGTCACATCGCTGAGGGCATGCAGCTGGTCTGCCCGCACTGCGGCCTCAGCCTGCCCGAGCAGAGCGAGTTCGAGCGCCATGTGGTGGCGCACTTTCTCATCGCGGGCAGCGAGTTCAACTGCAGCGTTGCCAGCTGCGGCAAAGCCTTTGCCAAGGCCGACGAACTGCAGCAGCATCTGAACCAGGAGCACGTGCACACGCTGCTCAAGTGCGGCATCTGTGCGGAGCTCTGTGAGAATCGCATGGCCATGCAGCTCCATCTGGCCTGCTCGCACTCGCAGGAGACGAAGCTGCTGCGCTGCAGCGCCTGCCTGGAGCTCTTTCGCAACGACACCGACTTCCATGTGCATGTCAAGACCAGGCACCAGTTGGCGACTACTGCCAGTGCTGCCTCTGGTGCTGGCACGCCCACAGCAGCCACGCCCACTGGCAACACACTGCAGTGCATGTTCTGTCGCGCCGTCTGCGCCTCCGAGCTGGAGATGCACTTCCATCTGGCAGCGCATGCACGCCAATTCCGCTGTCCCTCCTGCCCGGAGACTTTCCACGTGGAGTTCCTGTTGGATCGACACATGCAGAGCCAGCACGGGCAGGAGCAGAAGGAGCCAGCTAGCAGCGCCGGCTCACCCAGCATGGGCAGTCTCTATGTGAACGCGCTGCTGCCACCGCTGGCAGCTGCAGCCGCTGCCGCCGCCGCTGCGACCAACAACAACAGCAGCCTGCACATTGACTACAATCAGGCCTTCAAGGGACTCTTCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAAGTTCTACAGTCCGCTGCAGGTGGACACCAGCGCACTGAAGCCACAGCAGGCACCGCATCCCGCCCTCATGTACGGCCTCAGTCAGCGCTACCTTATGGAAATGTACGCAGCCAAGGCCACCTCGCCAGCAGCAGCAGCGGCAGCCGTGGCTCCACCCGCCGAGCAGCCTGCACCACCAGCTGCAGCTGGAAATGGAGCTCAGCTGAGCTGCGGCATGTGCGAGCGTCAGGATCTGCGCAGCGAGGCTGAGCTGCACTCGCACCGCAAGCTGGCGCACAATCTCAAGACCGGCGTCAGTCTGCGCTGTGCCTACTGCGCCGGCAACTTCAAGTCGCGCGCAGAGCTGGAGCAGCACATGAAGAGCTGCCACAACTCGAGTGGCAAGCACAAGTGTCTCATCTGCGACGAGATCTTCCCCTCGCCGGCCATACTGGCCGAGCACAAGCTGCAGCACTCCAAGGTGGGTCAGTCGGGCAAGTGTGCGCACTGTGGCCTGCAGCTGGAGCACGTGGCCGCCTACCGAGCGCATCTCTGCGAGCATGGCGGCGATGGCAGTCTGCCGCTGGCCTGCATCTGCTGCCGCCAGACACTGCACTCCGAGTTCGAGCTGAGTCTGCATGCCAAGTTCCACACGAAGTCGCCCAGCGGCGGCGGAGGCAGTCTGCAGGAGCCTGTGTGTGCTCTGTGCCTGGAGCCACTGCCAGGTGCGGCGGGTGAGACGGCCAAGCTGTGCGAGAAATGCTGTCGCAAGCACAATCTCAATGGCAAGAGGAGTAAGGAGGCAGCAGCTGCTCCTGCGCCGCCTCCCACTGCCAGCTCGCAGTCAAGTTATCTGGAGAATCGCTGCAATCTCTGCAAGATGATTCTGCCACACGCACAGAAGCTGCAGGAGCACCTGGTGGAGCACACGTTCGCCGGCACCGAGCAGCGCGGCTTCAACTGCTACATCTGCTCGGCCGTCTTCACCGCCCCCGCCGGCCTACTTAGCCACATAGCCGAGCACGGTGCGCGGCCCTACGACTGCAATCTCTGCCCGGAGAAGTTCTACTTCCGCGCCGAGCTGGAGCATCATCAGCGCGCCCACGAGCTGCGACCTGCTCCTGCCACAGCGCCCGTTCGCCTGGCCAAGCAGGAGCAGCTCAGCTCCCCCCTGGCCCTCAGTCCCAGTCATGTCAAGCAGGAGCTCTACGAATCAGAGACGGCGCCTGCTTCCCCGCCCGCCGCAGTGGAGCGAGAGAGGGAGCCTGCCCAGCAAGCAGCCGAGGATGAGGAGTACATTGAGGTCGAGCAGATGCCGCACGAGACACGCGCCGGCGATCTGCTGCCCTCCAGCCACACTGAGCGCTCCAGCAGCAGCGCCTGA
Protein Sequence: MMALKMLYRGPSSRLENLIEKIQATKEITNNDMYSTHTSSSYSPSISDGTLTPNSQQQQQPQQQQTHSHPLGEDAATEESKANGDTADREAASKVGKRPGHAXXXXXXXXXXXXXXXXXXXXXXKINKEAKQAGVAGAGTAGAAAGAGGGGAGHKFDKLTGEGIKSRGDGSYQCQFCDKSFPRLGYLKHHVQSHAEHLPFKCEYCAKLFKHKRSRDRHKKLHTNERNYKCPHCEAAFSRSDHLKIHMKTHDIQKPFQCSMCNRGYNTAAALTSHMQKHKKNAAILAAGGNPNALNYSPRSTGSASISSNGSLHKRRYALALASDSSPSRLEFPPKRARAASSAVPSTPTTTPTPTPNAVQLLRCSYCPKATEFASLEQLNAHLQLAHDSQQARNGAGESGSAAEQSSAAGNGFQLSCEYCTMRFHNIAGLFQHMRATHLDRLSSPNSYYEHFNRLATAGTFSPRLALELPKQLKQDLASPQRTEQQQQDVPTDLSSNKRRTLTPTGGGGGAPQPPPAPPGIFFCNQCNAGLPDFESFRNHLKSHIAEGMQLVCPHCGLSLPEQSEFERHVVAHFLIAGSEFNCSVASCGKAFAKADELQQHLNQEHVHTLLKCGICAELCENRMAMQLHLACSHSQETKLLRCSACLELFRNDTDFHVHVKTRHQLATTASAASGAGTPTAATPTGNTLQCMFCRAVCASELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSQHGQEQKEPASSAGSPSMGSLYVNALLPPLAAAAAAAAAATNNNSSLHIDYNQAFKGLFGXXXXXXXXXXXXXXXXXXXXXKFYSPLQVDTSALKPQQAPHPALMYGLSQRYLMEMYAAKATSPAAAAAAVAPPAEQPAPPAAAGNGAQLSCGMCERQDLRSEAELHSHRKLAHNLKTGVSLRCAYCAGNFKSRAELEQHMKSCHNSSGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCAHCGLQLEHVAAYRAHLCEHGGDGSLPLACICCRQTLHSEFELSLHAKFHTKSPSGGGGSLQEPVCALCLEPLPGAAGETAKLCEKCCRKHNLNGKRSKEAAAAPAPPPTASSQSSYLENRCNLCKMILPHAQKLQEHLVEHTFAGTEQRGFNCYICSAVFTAPAGLLSHIAEHGARPYDCNLCPEKFYFRAELEHHQRAHELRPAPATAPVRLAKQEQLSSPLALSPSHVKQELYESETAPASPPAAVEREREPAQQAAEDEEYIEVEQMPHETRAGDLLPSSHTERSSSSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01559205;
90% Identity: iTF_01550492;
80% Identity: -