Basic Information

Insect: Zaprionus capensis
Gene Symbol: -
Assembly: GCA_018903675.1
Location: JAEIFN010000040.1:7577494-7587798[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.8e-05 0.0013 19.0 2.1 1 23 277 299 277 299 0.97

2 18 6e-06 0.00042 20.5 0.4 1 23 305 327 305 327 0.97

3 18 0.00088 0.063 13.7 0.9 1 23 333 355 333 355 0.95

4 18 1.3e-05 0.0009 19.4 3.1 1 23 361 383 361 383 0.97

5 18 2.9e-05 0.002 18.3 4.7 1 23 389 411 389 411 0.99

6 18 5.3e-05 0.0037 17.5 5.7 1 23 417 439 417 439 0.97

7 18 2.6e-07 1.8e-05 24.8 4.3 1 23 445 467 445 467 0.98

8 18 9.2e-08 6.6e-06 26.2 2.4 1 23 473 495 473 495 0.97

9 18 5.4e-05 0.0038 17.5 6.7 1 23 502 524 502 524 0.97

10 18 9.4e-05 0.0067 16.7 6.5 1 23 530 552 530 552 0.98

11 18 8.4e-06 0.00059 20.0 4.5 1 23 558 580 558 580 0.98

12 18 6.1e-06 0.00043 20.5 8.1 1 23 586 608 586 608 0.98

13 18 4.9e-06 0.00035 20.7 7.6 1 23 614 636 614 636 0.97

14 18 5.5e-07 3.9e-05 23.7 7.7 1 23 642 664 642 664 0.98

15 18 0.00017 0.012 15.9 9.5 1 23 670 693 670 693 0.95

16 18 6.1e-05 0.0043 17.3 0.9 1 23 699 721 699 721 0.98

17 18 0.00067 0.048 14.0 3.4 1 23 731 753 731 753 0.97

18 18 7.6e-06 0.00054 20.1 1.6 1 23 759 782 759 782 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.8e-05	0.0013	19.0	2.1	1	23	277	299	277	299	0.97
2	18	6e-06	0.00042	20.5	0.4	1	23	305	327	305	327	0.97
3	18	0.00088	0.063	13.7	0.9	1	23	333	355	333	355	0.95
4	18	1.3e-05	0.0009	19.4	3.1	1	23	361	383	361	383	0.97
5	18	2.9e-05	0.002	18.3	4.7	1	23	389	411	389	411	0.99
6	18	5.3e-05	0.0037	17.5	5.7	1	23	417	439	417	439	0.97
7	18	2.6e-07	1.8e-05	24.8	4.3	1	23	445	467	445	467	0.98
8	18	9.2e-08	6.6e-06	26.2	2.4	1	23	473	495	473	495	0.97
9	18	5.4e-05	0.0038	17.5	6.7	1	23	502	524	502	524	0.97
10	18	9.4e-05	0.0067	16.7	6.5	1	23	530	552	530	552	0.98
11	18	8.4e-06	0.00059	20.0	4.5	1	23	558	580	558	580	0.98
12	18	6.1e-06	0.00043	20.5	8.1	1	23	586	608	586	608	0.98
13	18	4.9e-06	0.00035	20.7	7.6	1	23	614	636	614	636	0.97
14	18	5.5e-07	3.9e-05	23.7	7.7	1	23	642	664	642	664	0.98
15	18	0.00017	0.012	15.9	9.5	1	23	670	693	670	693	0.95
16	18	6.1e-05	0.0043	17.3	0.9	1	23	699	721	699	721	0.98
17	18	0.00067	0.048	14.0	3.4	1	23	731	753	731	753	0.97
18	18	7.6e-06	0.00054	20.1	1.6	1	23	759	782	759	782	0.96

Sequence Information

Coding Sequence: ATGCAGCACGTGAGCGCTGCCAGTTCGGCACCTTCGGTGGTTTCAGCACCGGTGGTGACCACTGGCGGTGGCACCACCATCACCTTGGGCGGAGGACATCCCCCAATAATACCCAGTAAAGGACACGGCGGCAGCGATAATCATCATAATCATAAGGAGGACGGTAGCGGTAAACCGCCGCACGGCATTGAAATGTATAAAGTGAACATTGAGGATATATCACAGTTATTTACGTATCACGAAGTCTTTGGTAAAATCCATGGCGATGTGGTTAATCATGTGGCGGCGGTGCATGGCAGCCAATTGCCACCGCCTCAGTTGCCACCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGTGTGACGGTATCGGGTGAGTTGCTAATGCCTAAAATGGAGGGCGGCATACATGGCGTCGATGGTCAGTCGAGTGTATCGTTGGCGCCCGATGGGACGCCGATAGCGACTGGTACGCATGTATGCGATATTTGTGGCAAGATGTTCCAATTTCGTTATCAGCTGATTGTGCACCGTCGCTACCACAGCGAGCGTAAGCCGTTCATGTGTCAGGTGTGCGGTCAGGGTTTTACCACATCGCAGGATTTAACCCGTCATGGTAAAATTCATATTGGCGGTCCCATGTTCACCTGCATTGTCTGTTTCAATGTGTTCGCAAATAATACAAGCCTGGAGCGACATATGAAGCGACATTCGACAGATAAACCATTCGCCTGCACTATTTGCCAAAAGACATTTGCACGCAAAGAGCATCTGGACAATCATTTTCGTTCCCATACGGGCGAAACGCCGTTCCGTTGCCAGTACTGCGCCAAGACGTTTACGCGCAAGGAGCACATGGTCAATCATGTGCGCAAACACACGGGTGAGACGCCACATCGTTGCGATATTTGTAAGAAGTCCTTTACGCGCAAGGAACACTATGTTAACCACTACATGTGGCACACTGGTCAAACACCGCATCAGTGCGATGTCTGTGGCAAGAAATACACACGCAAGGAGCATCTAGCCAACCATATGCGCTCCCACACCAACGAGACGCCGTTCCGTTGTGAGATCTGCGGCAAGAGCTTTAGCCGCAAGGAGCACTTCACCAATCACATACTCTGGCATACAGCAGGCGAGACGCCACATCGGTGCGATTTCTGCTCCAAGACGTTTACGCGCAAGGAACATCTGTTAAATCACGTGCGTCAGCACACCGGGGAGTCGCCGCATCGCTGCTCGTACTGCATGAAGACGTTTACGCGCAAGGAGCATCTGGTGAATCATATACGCCAGCACACGGGTGAGACACCGTTCAAGTGCACGTACTGCACGAAAGCGTTCACTCGCAAAGATCACATGGTTAATCATGTACGGCAACATACAGGCGAATCGCCGCACAAGTGCACATACTGCACCAAGACGTTTACACGCAAGGAGCATTTGACGAATCATGTGCGTCAGCACACGGGCGATTCGCCGCATCGTTGCAGCTATTGCAAGAAGACCTTTACCCGCAAGGAGCATTTGACGAATCATGTTCGTCTCCATACAGGTGATTCGCCGCACAAATGTGAATACTGTCAGAAGACGTTTACGCGCAAGGAGCATCTCAATAATCATATGCGCCAACATTCGAGTGACAATCCCCATTGCTGCAATGTGTGCAACAAGCCGTTCACACGCAAGGAGCATCTGATCAATCATATGTCCCGTTGCCACACCGGCGATCGTCCCTTCACCTGTGAGACGTGTGGCAAATCCTTTCCCCTCAAAGGCAATCTGTTATTCCATCAGCGCAGCCACACCAAGGGACAGGAGTGTGAGCGTCCGTTTGCCTGTGAGAAGTGCCCCAAGAATTTCATATGCAAAGGTCACTTGGTCTCGCACATGCGCTCCCATTCGGGTGAGAAACCACACGCGTGCACACTGTGCAGCAAGGCTTTCGTCGAGCGCGGCAATTTGAAGCGCCACATGAAGATGAATCACCCGGATGCTATGATGCCGCCACCACCCGTGCATCCGCATCCGCAAATACCGGCTGGTGTGCTGACCCAAGTCAAGCAGGAAGTGAAACCGATCATAATTCCCCATCACTCGGCGACGACCACGATGCATACCATCCAACAGATAACAGCGGGCGCAGCAGCGGCTGGCGCCGGTGCCGTCCAGCTAACGCCAGGCCTGGTGCCGCTGACTCTGCTGGCCTGGCGCCCGCTTGCGCAACGTGCAATACAAGAAAGAAAAACACATCTCATAGTTACCCTTCAAACTGTTCTCTAA
Protein Sequence: MQHVSAASSAPSVVSAPVVTTGGGTTITLGGGHPPIIPSKGHGGSDNHHNHKEDGSGKPPHGIEMYKVNIEDISQLFTYHEVFGKIHGDVVNHVAAVHGSQLPPPQLPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVTVSGELLMPKMEGGIHGVDGQSSVSLAPDGTPIATGTHVCDICGKMFQFRYQLIVHRRYHSERKPFMCQVCGQGFTTSQDLTRHGKIHIGGPMFTCIVCFNVFANNTSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGQTPHQCDVCGKKYTRKEHLANHMRSHTNETPFRCEICGKSFSRKEHFTNHILWHTAGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCSYCMKTFTRKEHLVNHIRQHTGETPFKCTYCTKAFTRKDHMVNHVRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGDSPHRCSYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFTCETCGKSFPLKGNLLFHQRSHTKGQECERPFACEKCPKNFICKGHLVSHMRSHSGEKPHACTLCSKAFVERGNLKRHMKMNHPDAMMPPPPVHPHPQIPAGVLTQVKQEVKPIIIPHHSATTTMHTIQQITAGAAAAGAGAVQLTPGLVPLTLLAWRPLAQRAIQERKTHLIVTLQTVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01559167;
90% Identity: iTF_01559167;
80% Identity: -