Basic Information

Gene Symbol
ct
Assembly
GCA_018903675.1
Location
JAEIFN010001073.1:7394693-7427475[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.5 8.1e+03 -3.2 0.0 5 33 421 451 418 453 0.79
2 4 7.4e-27 4e-23 81.1 0.0 3 72 569 639 567 644 0.95
3 4 7.3e-32 4e-28 97.1 0.0 3 77 954 1029 952 1031 0.96
4 4 4.5e-31 2.4e-27 94.6 0.0 3 76 1255 1329 1253 1332 0.96

Sequence Information

Coding Sequence
ATGCAATCGAATGTGGCACATGCCGATGGTGATCTGGATGATGATGACATGGAGCTGGAGCCGGAGCCGGAGCATGTTGCTGATGCCGGCAGCAGCAGCACTAATGTTGCTGCCGTTGAGCAATCAGCAAGAACTGAAAGTGTTGCCGATGCACATGCGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGAGGAGGCGGCAACAGTTGCTGGCATCGATGTTGCTGCGATTAAAGCACTGCTGGATGAGCTGCAACGCCTGCGCGCCTTGGAGCAGACTCACCTGGTACAAATCCATCAGCTCGAGGAGCATCTGGAGGTGAAGCGTCAGCACATTATGCGACTGGAGGCGCGTCTTGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGATGATGATGAGGATATGGAGGCGTCAGCTCAGCACAACAATCGGCATGTGCTGAACAACGATGAGGAGCAGGAGGATGAGGAGTTGGAGGCCGATGGTGATGATGCCGAGATGTCCAGTGTCGGCGCGACAGCAGAGAGCAGCAACGAGCTAAAAATCAAAAAGGAGCAACACAGTCCACTGGACCTGAATGTGCTCAGTCCACAGTCGGCCATCGCTGCCGCCGCCGCAGCCGCGGCAGCAGCTGCCTGCGCCAACGATCCCAACAAATTCCAAGCTCTGCTCCTGGAGCGGACCAAGGCTCTGGCCGCGGAGGCGCTCAAGAATGGCGCCAGCGATGCAGCCAGCGAAGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATCATCATCATGCTGCACATGCTGCCCATGCTGGCCACACACAGCTGCTGCATGCCGCACACCATCTGCACCATGGCGGCGGCGACTCCAACTCGTCCAGCGCCACCAGCACACCCAACAGCACCGCCCAGCTGGCAGCAAGCATTGCCAGCACACTCAACGGCAACAAGTCGCTGCTGCAGCAGGCGGCAGTGGCGGCCAATGTGGCTGCCGCTGCTGTTGCCGTTGCCGAGGACAACAACAACAGTCTGACACCGAATGCAAATGCCGCCGCCGTGATGGCCGCACATGCACAGCATGCTGCCGCCGCTGCCCTGGGTGCGCCCAGTTTCTTGCCCAACTTACCCAATCTGCCCAGTTTGCCAGCATTCCAATTCGCAGCAGCCGCTGCCGCTGGACAGGATCCGCGTGCGCATTTCCGTTTCGCCGATGCAGAGCTGCAACTGCAGCCCGGCGTATCGATGGCCGGTCGCTTGGGTGAGTCGCTGATACCCAAGGGGGATCCCATGGAGGCCAAACTGCAGGAGATGCTGCGCTACAATATGGATAAATATGCCAATCAGGCTCTGGACACGCTGCACATCTCGCGTCGTGTGCGGGAACTGCTGTCGGTGCACAACATTGGCCAGCGGCTGTTTGCCAAATACATACTCGGCCTGTCGCAGGGCACCGTCTCGGAGCTGCTCAGCAAACCGAAGCCCTGGGACAAGCTGACGGAGAAGGGACGCGACAGCTACCGCAAGATGCACGCCTGGGCCTGTGATGATAATGCGGTCATGCTGCTCAAATCGCTCATACCCAAGAAAGACTCCGGCTTGCCACAATACACTGGACGCGGCGCTGGCGGCGATGATTCCATGTCAGAGGATCGCATTGCACACATACTCAGCGAAGCATCGTCGCTGATGAAGAGCAACGCTGATAAGATGGCGCGTCTGTATCAGGAGCTGATGGCGCGCACGCCACGCGAAGCTGCATTTCCAAGCTTCCTGCTGTCGCCCTTCTTTGGAGGCGCTGCCGGCATGCCCGGCGCAGCGGCCAATCACTTTCCCACCATGGCCGCCGACGAGAACATGCGACACGCCGTAGAGCGCGAGATTGCCAAGCTGCAACAGCAGCACCAGCAGCAGGCGGCGCAGGCACAAGCCGCCAGTTTCCCCAATTTCTCCAGTTTGATGGCACTGCAGCAGCAGGTGCTGAACGGCGCACAGGATCTGTCGCTGGCCGGCAAGGATATCAAGTTGAACGGTCAGCGCTCCTCCCTCGACGCCCTCAGCGGCAGCAGCAGCTCCAAGGATGGCGGCGAACGTGGCGACGATGTTGTGGAGCGCAGCAGCTTCGGCTCATCTCGGCCACAGCATGCCATGAAATCCGAAGGTGGCGGCGGCGGCAACACACCCGCACCCCCAGCACCACCAGCACCGCCAGCTCCCGCAGGCAGCAATCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGCAACTCAGCAGCGCCAAGTCCCCTAAGCAATTCCATATTGCCGCCAGCTCTGAGCAGCCAAGGCGAAGAGTTTGCGGCCACAGCGAGTCCGTTGCAGCGCATGGCCTCGATCACCAACTCGTTGATCACACAGCCCCCCGTGACGCCGCACCACTCGCAGCCGCAGCGACCCACCAAGGCGGTACTGCCGCCCATTACGCAGCAACAGTTCGACATGTTCAACAACCTCAACACGGAGGACATTGTGCGTCGCGTCAAGGAGGCCCTCTCCCAGTACAGCATCTCACAGCGCCTCTTTGGGGAGTCAGTGCTGGGCTTGTCGCAGGGCTCCGTCTCTGATTTGCTGGCCCGGCCCAAGCCATGGCACATGCTCACACAGAAGGGTCGCGAACCCTTCATACGCATGAAGATGTTCCTCGAGGATGAGAATGCGGTGCACAAACTGGTCGCCAGCCAGTACAAGATTGCGCCCGAGAAGCTCATGCGCACGGGCAGCTACAGCGGCAGTCCACAGATGCCGCAGGGCTTGGCCAACAAGATGCAGGCCACGCTGCCCATGCAGAAGATGATGAACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCACAATTGCTCCATCATCAGAATATGCTGCTCACCTCGCCCGGCCTGCCGCCACAGCATGCAATCAGTTTGCCCGCGGCCAACACGCCCGTCAGCGGTGTCCCCGGGGTGGGCAACACAGTCGGAGGCGGCTCCAGCTCGGACAAGAAACCGATGCTGATGCCGGTGCATGGCGGCGCACACGGGCCCAATGCCATGCGCAGCCTGCACCAGCACATGTCGCCCACAGTGTACGAGATGGCTGCCCTCACACAGGATCTGGACACGCACGACATCACCACCAAGATCAAGGAGGCACTGCTGGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGCTGGGTCTGTCGCAGGGCTCCGTGTCGGAGCTGCTGAGCAAACCCAAGCCGTGGCACATGCTGTCGATCAAGGGACGCGAACCCTTCATACGCATGCAGCTCTGGCTGAGCGATGCCAACAATGTGGAGCGACTGCAGCTGCTGAAGAACGAGCGGCGGGAGGCGAGCAAGCGACGCCGCAGCACCGGACCCAATCAGCAGGACAACAGCAGCGATACGTCCAGCAATGATACAAATGATTTCTACACAAGCAGTCCGGGACCCGGTTCGGTGGGCTCCTCCGTTAGCGGTGCCCCGCCGAGCAAGAAGCAGCGTGTGCTCTTCTCCGAGGAGCAGAAGGAGGCACTGCGCTTGGCCTTTGCCCTCGATCCGTATCCGAATGTCGGCACCATTGAGTTTCTGGCCAACGAGCTGAGTCTGGCCACGCGCACCATCACCAACTGGTTCCACAATCATCGCATGCGCCTCAAGCAGCAGGTGCCACATGGCCAGCCCGGCCAGGATAATCCCATACCCAGTCGCGAGAACACCAATGCCACGCCCTTTGATCCCGTCCAGTTTCGCATACTCCTCCAGCAGCGTCTGGTCGAGCTGCACAAGGAGCGCATGGGCCTAAGCGGTGCGCCCATCCCATACCCACCGTACTTTGCTGCGGCTGCTCTGCTTGGTCGCAGCTTGGCCGGCATACCGGGCGCAGCAGCAGCGGCGGGCGCAGCAGCTGCCGCAGCGGCAGCAGTGGGCGCCGCGGGCGGCGATGAACTGCAGGCTCTAAATCAGGCATTCAAGGAGCAAATGAGCGGCCTGGATCTGTCCATGCCGACGCTGAAGCGCGAGCGCAGCGATGACTATCAGGATGAACTGGAGCTGGATGCCAGTGCGCACAATATGAGCGACAATGAATCACTCGAGGGCGCTGGCCACGAGTCGCAGCTGGACAGCTCTGCCGTCTCCGAGTACGAGAAGGTGTTGCAGAAGTCAGCGCTGGCCTCGGCTGCCGCTGCCGCCGCGTACATGAGCAATGCGGCACGCAGCTCCAGGCGCAAGCCCGCTGCACCACAGTGGGTCAATCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGAGCGCATCATCAATGGCGTCTGTGTCATGCAGGGATCGGACTACAGTCGCGACGATGGCGACAGTGTCAAGGGGGATGCGGGCGGCGATGCTGAGCATGCGGATCATTCGCATCTGGAGATCGAACAGAGTTTCATGGAGCCCGAGGTGCACATCAAACAGGAGGAGGACGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGCCAGCNNNNNNNNNNNNNNNNTGAAGGTGATCAACGAGGAGAAGCTGCGTCTGGTGCGCGTGCGGCGTCTGAGCAGCAACGGCGATGCTGAGGAGCATTGTGCCGCCGCGCAGCAGGCAGCGACTGCAGCGACGCCAGCGGCAGCAGCGTGGAACTTTTAA
Protein Sequence
MQSNVAHADGDLDDDDMELEPEPEHVADAGSSSTNVAAVEQSARTESVADAHAKXXXXXXXXXXXXXXEEAATVAGIDVAAIKALLDELQRLRALEQTHLVQIHQLEEHLEVKRQHIMRLEARLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDDEDMEASAQHNNRHVLNNDEEQEDEELEADGDDAEMSSVGATAESSNELKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASDAASEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHHHHAAHAAHAGHTQLLHAAHHLHHGGGDSNSSSATSTPNSTAQLAASIASTLNGNKSLLQQAAVAANVAAAAVAVAEDNNNSLTPNANAAAVMAAHAQHAAAAALGAPSFLPNLPNLPSLPAFQFAAAAAAGQDPRAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYTGRGAGGDDSMSEDRIAHILSEASSLMKSNADKMARLYQELMARTPREAAFPSFLLSPFFGGAAGMPGAAANHFPTMAADENMRHAVEREIAKLQQQHQQQAAQAQAASFPNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRSSLDALSGSSSSKDGGERGDDVVERSSFGSSRPQHAMKSEGGGGGNTPAPPAPPAPPAPAGSNPXXXXXXXXXXXXXXXSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQLLHHQNMLLTSPGLPPQHAISLPAANTPVSGVPGVGNTVGGGSSSDKKPMLMPVHGGAHGPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIPGAAAAAGAAAAAAAAVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASAHNMSDNESLEGAGHESQLDSSAVSEYEKVLQKSALASAAAAAAYMSNAARSSRRKPAAPQWVNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSERIINGVCVMQGSDYSRDDGDSVKGDAGGDAEHADHSHLEIEQSFMEPEVHIKQEEDDEXXXXXXXXXXXXXXXXXXXXDASXXXXXXKVINEEKLRLVRVRRLSSNGDAEEHCAAAQQAATAATPAAAAWNF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01550891;
90% Identity
iTF_01550891;
80% Identity
iTF_01550891;