Basic Information

Gene Symbol
Gata6
Assembly
GCA_018904165.1
Location
JAEIFS010000741.1:23283934-23291845[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.4 6.6e+03 -3.3 0.1 4 15 401 412 400 414 0.60
2 2 3.4e-18 9.4e-15 53.8 6.8 1 34 452 484 452 486 0.97

Sequence Information

Coding Sequence
ATGGTTTGCAATAGCATCGCCATCGACATCAAGATGCAGCTGAAGATTGGCGAGGCAGATGAGCAGCAGGCACAGTACGTGGCAGTGAAGCCACGTGGCCAGAAGCGCCTCATACTGACCACAGCGGGAACACTTGAACCACGCGACATCGAGCACAGCGGCAACAACAGCAACGGCGGCAGCTCCAACTCGGCGCCGGACTCACACGTTGAGTACCAGCGCAGTGCGATCCACTCGCCCCATCACTACATACAGATGGCGCCCAGGAACGCGGCCGAGGTGGATGCCCAGCCGGGCACACTCTACAGCTACCCCACGGGGCAGATCATCTGCAGTGGGGACGATGTGGCGGCCATCAAGATCGAGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATCACACCGTGCGCTACGTCACCGAGGACGGACGCTTTGCGACGGCCAGCGGCGAACCGGAGACGCCCTCGGGCGCCAGTCTGTACTACGAGGCGCCCGTGGTGGATGCCAGTGTGCATGCGGCGAACGAGTCAAAGACCTATGCGGATCTGGGCAACGCGTACGCCCCCTTCCCGCCCAACTCGACGTTCAGCAGCAACAGCTACACGGCGACAACACTGCAGCAGGGCAACACCATATACAGTGTGCCAGGAGCGACGCAGTTCATCACCAAAACGGATCCCAATTTGAATCCTTTGCGCCAGAGTGCGCCATATCCGACCATATCCTTCCTGGACGGTGGCGGCAATGCCAACGATGCGGCCTTGTGGACCACAGCGGGAGCCGAGTACCAGAATGTCTCATTTTCCAACTATCATCCGCAGGTCGTCGATGATTATCCCGCGGGCACCATGACCACAGCCCATTGGCCGCCTGCCAGCTACGATCCCAGTAGCGCAATGAGCAGCGCCTCCACGCCCCCCACGCCTCATCATGGCCTGCCCGAGCTGAAGTGTGATGTCTGCCAGACATCGTACATGCGCAAGGGCACCGAGTGGTTCTGCCCGGTGTGCTCCAACTACGGTCGCGTCATGCAGCCGCGCATGCCGCAGCGCCAGAAGCCGAAGGCAGCCGCTGCGCCCAATAATCGCCGCAGTGGCGTCAACTGCGCCAACTGCCAGACCACTTCGACAACTCTCTGGCGGCGCAACAACGAGGGCAACCCAGTGTGCAATGCCTGCGGACTGTACTTCAAGCTGCACAACATGAATCGGCCGCTGTCCATGAAGAAGGAGGGCATCCAGAAGCGCAAACGTAAGCCAAAGAACAACGGAGCACCCATGGGAGCAACGCACAGGCCGCTGCCAAGCATGTCGCAAGGCGTCAATGCGATGATGAACAACGTTCCCCTGTATCCCTCCCAGGTGCCAGTGGGTCTGCTCCAGAGCCAGCAGCATAACGCGAGTCCTGAGCTACACGACATGTCCACCACAGGGCCAGCAGGTGCTGGCGGTGCACGCGTGCTCACTATTGTGAATCCCACCGTGCCCACCAGCTCGGATGGCACGCTTAATATGTCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCCAAACTCGAGCACACTGAATCGCCAGATCGCCCAATCTGTGCCGCCAATCGAGAGTGGACGTAGTTCACAAAGCGAACTGACTCCGAGCGTCATCACGCGCACTGGCCTGCCGGAGCGCACTTCGAATAACTGA
Protein Sequence
MVCNSIAIDIKMQLKIGEADEQQAQYVAVKPRGQKRLILTTAGTLEPRDIEHSGNNSNGGSSNSAPDSHVEYQRSAIHSPHHYIQMAPRNAAEVDAQPGTLYSYPTGQIICSGDDVAAIKIETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNHTVRYVTEDGRFATASGEPETPSGASLYYEAPVVDASVHAANESKTYADLGNAYAPFPPNSTFSSNSYTATTLQQGNTIYSVPGATQFITKTDPNLNPLRQSAPYPTISFLDGGGNANDAALWTTAGAEYQNVSFSNYHPQVVDDYPAGTMTTAHWPPASYDPSSAMSSASTPPTPHHGLPELKCDVCQTSYMRKGTEWFCPVCSNYGRVMQPRMPQRQKPKAAAAPNNRRSGVNCANCQTTSTTLWRRNNEGNPVCNACGLYFKLHNMNRPLSMKKEGIQKRKRKPKNNGAPMGATHRPLPSMSQGVNAMMNNVPLYPSQVPVGLLQSQQHNASPELHDMSTTGPAGAGGARVLTIVNPTVPTSSDGTLNMSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNSSTLNRQIAQSVPPIESGRSSQSELTPSVITRTGLPERTSNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_01551378;
80% Identity
-