Basic Information

Insect: Zaprionus camerounensis
Gene Symbol: -
Assembly: GCA_018904165.1
Location: JAEIFS010000001.1:4748124-4750036[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 4.3e-06 0.0003 20.9 0.8 1 23 252 274 252 274 0.99

2 6 4.5e-06 0.00032 20.9 2.3 1 23 280 302 280 302 0.98

3 6 2e-06 0.00014 22.0 1.8 1 23 459 481 459 481 0.98

4 6 3.5e-05 0.0025 18.1 1.8 1 23 487 509 487 509 0.98

5 6 0.2 14 6.3 2.7 1 23 515 537 515 537 0.98

6 6 0.0051 0.36 11.2 4.3 2 23 571 592 570 592 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	4.3e-06	0.0003	20.9	0.8	1	23	252	274	252	274	0.99
2	6	4.5e-06	0.00032	20.9	2.3	1	23	280	302	280	302	0.98
3	6	2e-06	0.00014	22.0	1.8	1	23	459	481	459	481	0.98
4	6	3.5e-05	0.0025	18.1	1.8	1	23	487	509	487	509	0.98
5	6	0.2	14	6.3	2.7	1	23	515	537	515	537	0.98
6	6	0.0051	0.36	11.2	4.3	2	23	571	592	570	592	0.96

Sequence Information

Coding Sequence: ATGGAGCTGGGCTCTGCCAACTGTGCCGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGATCCCATCAAGTACGAGTACCACGAGCCCGAGGAGAACTTTGTGTCGATCGATGATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGATATCCAGCTTATTCCCACCAAACAAGTGGAGCAGCGTGTCGTGGCCAGAATCGATCTCATCGACAGTGAGTGCGAATTTGTGGACGAGGAAGCGGAGGAGGACGATGATGATGAAGAGGATTTGCCGCTGGCTGCCGTTAGCTGCGAGCTGAAAGAAACTGCGCAGTTGATTGTGCTGCAAACGGACGACGACGAAGATGATGAGGACGACGACGGCGACGTCGAGCAACGCCAGCAGCGCAGCAGCAGCAAGACGACGTCACGCAAGCGTGCACCACGTCCCTACATCAAGCGACGCATACGTCATTACTATCAGTGCCAGGCGTGCGGCAAGAAGGTGCAGTCCAACTACAATCTGCGACGCCACATGATGATACACACAGGCGAGCGTCCCTTTCCCTGCGATCTCTGCGATCGACGCTTTCGTGAGTTCAGCGATCTGAAGAAACATCGTCGGCGGCATCTGAATGATCCGCGCTATATCTGCATGATCTGTCGCCAGCAGCCGCCCATGGAGCAGGACTCGACGCGCTGTGCGGAGTGCGAGGGCAAGAATCTGTTGCTCAGTCCGCAGCACTGCGAAGTGGAGACGCTGCAGCAGGCAACAGTTGCACAGGAACAGAATCAGGAACAAGATCAGACAGATGCAGAGCAGGAGCTGGAGGCGGAGGCGGAGGAAGAGCAGGAGGAGAAACAGCCAAAAGGCAATACAAGACTTGCTCCATCCCCGCCCGTTTTAATGGTCACTCTGGTGCCTACACCAGCAGCACCACCACCACCTAAACCTTCACCTGCACCTGTAACTGTTACTCTTACTGCCCCCGCTCCTCCACGTCCTCCACCAGCGCGCAGCTGCAGCAGCGCCAACTCCTCCTCCTCGGCACTAAGCAACGATGCGGCACCACATCCACCAAGACGCAACGAACGCAGCTATCCCTGTACCGTGTGTAATCGTCCCTTTGGCACACGACACAATCTCAAGCGTCACTACATGATCCACACGGGTGAGAAGCCCTTCAGCTGCAGCAAGTGCCGCAAACCCTTCCGCGAGGGCTCCACCTTGAAGAAGCACATGGTGACCCACAGGCGTGAACGTTGGTACAAGTGCCTGCGCTGTCCCGCCAAATTCCAGGATTATCTGCACTACACGGATCACAAGGCGACACACGCAGGTACGGATGCGGCACAGCCCGCCGTGACCATCAAACGCCTGCGACCACGTTCATCTGACAGCGAGGATGGCGATAGTTCTGTGGAGGATTGGCTGGAGTGCTGCGAGTGCCAGTGTCGCTTTACACAGCTGGACGAGTACACAGCGCATCTAAAGCAACACGATCTGGAGCAATACGGCATGAGTGTTGATGATCTGGACGATGAGGAGGATCAGGATGTCGATGTGGCCTAG
Protein Sequence: MELGSANCAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPIKYEYHEPEENFVSIDDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDIQLIPTKQVEQRVVARIDLIDSECEFVDEEAEEDDDDEEDLPLAAVSCELKETAQLIVLQTDDDEDDEDDDGDVEQRQQRSSSKTTSRKRAPRPYIKRRIRHYYQCQACGKKVQSNYNLRRHMMIHTGERPFPCDLCDRRFREFSDLKKHRRRHLNDPRYICMICRQQPPMEQDSTRCAECEGKNLLLSPQHCEVETLQQATVAQEQNQEQDQTDAEQELEAEAEEEQEEKQPKGNTRLAPSPPVLMVTLVPTPAAPPPPKPSPAPVTVTLTAPAPPRPPPARSCSSANSSSSALSNDAAPHPPRRNERSYPCTVCNRPFGTRHNLKRHYMIHTGEKPFSCSKCRKPFREGSTLKKHMVTHRRERWYKCLRCPAKFQDYLHYTDHKATHAGTDAAQPAVTIKRLRPRSSDSEDGDSSVEDWLECCECQCRFTQLDEYTAHLKQHDLEQYGMSVDDLDDEEDQDVDVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01551249; iTF_01551247;
90% Identity: iTF_01551249;
80% Identity: -