Zcam014275.1
Basic Information
- Insect
- Zaprionus camerounensis
- Gene Symbol
- Mblk-1
- Assembly
- GCA_018904165.1
- Location
- JAEIFS010000006.1:6334784-6349750[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.17 3.9e+02 0.7 0.0 16 35 353 372 349 376 0.85 2 2 5.4e-19 1.3e-15 56.7 0.0 1 43 547 590 547 592 0.95
Sequence Information
- Coding Sequence
- ATGCGCCTAGAACGTGTCGCTGAGGAATTAATGGGTCGCAGGAAATGGAAACATTATCAAGATCAAGTGACGCGCAATCAATTGAATATTGCCGAGCAACAGCCCATATCAATAACGCAAGAGACCGAAGAGGACAGTCAGAAGAGCGAACACCGCAAACCAACACTGAACCACCGTTTAGAGCAGCCCAACGGCAACAGCAACAGCAACAACAACCAGGGCTTACTGCAATTTGAAAGAGATTTTGACAAGCAGCAAACATCACACGAACACGACTCAAGTGCAACATCACGTAGCTCAGGCTCACCTTCACCACCACCGCCAGAACCCAACGATTGGATACCGTCTGATAAGTGCAATTTCTGTATTAATGGTCGCCTGCTAACGGTAAACGCCCAAGGCGAATTGGTGGCCGAAACAACAACAGCAACAACAACTCACAACTGCAGCACCAGCACCAGCAATATTTACAGCGGCATAACTGTGCAGCAGCACGACAGCGACAGCAACTCGAGCGCATCGCTGCACAATAGCAGCAGAAACTACAACAGCAGCAACAACAAGAATCAGAAGCATAGAGCAACACGGAATACCCCCGTCGCCCCAACAACTCCCTTTGAACTGTACAAGTTGCTGACGCAGCAGCAGCAACAGCAGCAACAGAAACAACCGTCTAAGATGACATCAATGGAATCAATGGCCGAAAAACTGGCCAAGTTCACCATGATGACCGACTTTAATCTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACAACACCATACTAACTCTGTAACGCCATCTACCTCAGATGTATCTGCAGTCGTCGCTGCTGCTGACGCTGCCACTGGCAGTCCCACACTCAAAGATACTCCCAGTCCCAGTGCAGATGCGCCCCTGGATCTGAGCAGCAAACCATCGCCAAATTCATCCATAAGCGGCGACAGCAAGACAGTCAGACACTCGGACTGTGGTGCATCCATGCCAGCGTCAGCCACGCGCTGCATCAGCGAGCCACTGTCCAAGCACAAGCTTGGCGGGCGACGTGCATCCGGTTATTACCAAGGACCGCGCTCGACGATGCTGCGCAACAAACTGTGCAAGTTGTCGTCGCCCGAACTGAAGCGAGAGCCACAGCACGAGTTGCAGCACGAGCACGACGGCGCCAGCTCCGGGCTGGGGGCAGAGGAGCAAGATGAGTCTGGTGACGAGGTCGGAGATGGCGGTAGCAATGCATCGACGCCGCCATCGACAGGCTTTCAGGAGTTCGCCCAACACAATGGCAGCGAGCTGGGTGACGATCTGGAGTCGGGTCAAATGTCGCCCAAGCTGATGCGGCCACAGAGCACAGGCACACCCACGGCGGGCGCTGCTGGGCTGCAGGGAGCGACAGCGGCAGCGATGGCAGCCAGCGCCGCAGGGTTGCCCATGCACATCGATACCAATGTGTTGCTGCAAACGTTGCTGCTGGCGACGGGCATCGTTATGCCCAATCCGGATGATACACAGCGACTGGGAGATCTGATCAAGACACTGATACTGGCGAATAGTGGAGGCATTCTGAATGAGAGACTTGGAACGCGACCAAAGCGCGGCAAGTACCGCAACTACGATAGGGACAGTCTGGTCGAGGCGGTCAAGGCGGTGCAGCGTGGCGAGATGTCGGTGCATCGTGCGGGCAGCTACTACGGCGTGCCGCACTCTACACTGGAGTACAAAGTGAAGGAGCGTCATCTGATGAGGCCGCGCAAGCGTGAGCCAAAACCTCAACCGGATCTCGTCGGCCTGACAGGGGCAGCGAATAAATTAAACCCCAATATACATGGCCTGAGTCATATGGACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTGCCCATGTTCGATACTGCCTCCCCGTTGTCGTTCCAGCCCAGCATGTTCTGGGCGCAGCCCAATGCGGGCGCCAACTATGCCCTGGACTTCAATCGGAATCCCGAATTTCTAAAGTCGCACCTTGCCGAGGTGATGCGCAGCAGTCCGCTGGCCAATCATCATGCCGTTCATGCAGGCTCTGCCGCAGCGGGGGGCATGAAGAGTGCGCTGGAGTTCACCGAGAATATGTACGATGGCATTATCCGCAAGACGCTCAATAATGATGGCGACATGGGGGGAGCGACCAGCGGCACGGGCAACGGCAATGCGCTGCTGGATCAGCTGCTGGTGAAGAAGACGCCTCTGCCGTTTACCAATAATCGCAGCAACGATTATCTGGCTGCCACCTGCTCCTCCAGAGAGGGCGCTGAGGGTGTCAAGCGGCCGGGCAGTCCTCTGGGTGGCGGCGGCGTAGGAGGCGCCTATGCGGACATCAAGCGCGAACGACTCAGTCCTATGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGACGTCACGCGACTCGGAAACGGACGCCAGCAGCTTGAAGAGCGAACTGTCGCACAGCTCGGCTCGCCTGGCCAGCAAAATGATGGATCTCAATGGCAGTTCGAGCATCAAATTCGAGCCAGAGCTGCAGCACGAACCTGCAGCAGGGACGCCGACAGCGACGTCGACAGCAATATCGCCCGGCAGTTCCATACTGCACGAGAAGCTGGCACAGATCAAGGCCGAGCAGAGCGACTATGCTGCCAGCGATGAGCAGTTATAG
- Protein Sequence
- MRLERVAEELMGRRKWKHYQDQVTRNQLNIAEQQPISITQETEEDSQKSEHRKPTLNHRLEQPNGNSNSNNNQGLLQFERDFDKQQTSHEHDSSATSRSSGSPSPPPPEPNDWIPSDKCNFCINGRLLTVNAQGELVAETTTATTTHNCSTSTSNIYSGITVQQHDSDSNSSASLHNSSRNYNSSNNKNQKHRATRNTPVAPTTPFELYKLLTQQQQQQQQKQPSKMTSMESMAEKLAKFTMMTDFNLXXXXXXXXXXXXXXXXXXQQHHTNSVTPSTSDVSAVVAAADAATGSPTLKDTPSPSADAPLDLSSKPSPNSSISGDSKTVRHSDCGASMPASATRCISEPLSKHKLGGRRASGYYQGPRSTMLRNKLCKLSSPELKREPQHELQHEHDGASSGLGAEEQDESGDEVGDGGSNASTPPSTGFQEFAQHNGSELGDDLESGQMSPKLMRPQSTGTPTAGAAGLQGATAAAMAASAAGLPMHIDTNVLLQTLLLATGIVMPNPDDTQRLGDLIKTLILANSGGILNERLGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQPDLVGLTGAANKLNPNIHGLSHMDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPMFDTASPLSFQPSMFWAQPNAGANYALDFNRNPEFLKSHLAEVMRSSPLANHHAVHAGSAAAGGMKSALEFTENMYDGIIRKTLNNDGDMGGATSGTGNGNALLDQLLVKKTPLPFTNNRSNDYLAATCSSREGAEGVKRPGSPLGGGGVGGAYADIKRERLSPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSRDSETDASSLKSELSHSSARLASKMMDLNGSSSIKFEPELQHEPAAGTPTATSTAISPGSSILHEKLAQIKAEQSDYAASDEQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01552377;
- 90% Identity
- -
- 80% Identity
- -