Basic Information

Gene Symbol
ct
Assembly
GCA_018904165.1
Location
JAEIFS010000739.1:2927069-2968664[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 4.7e-27 3.8e-23 81.2 0.0 3 72 475 545 473 550 0.95
2 3 4.6e-32 3.7e-28 97.2 0.0 3 77 859 934 857 936 0.96
3 3 2.8e-31 2.3e-27 94.7 0.0 3 76 1161 1235 1159 1238 0.96

Sequence Information

Coding Sequence
ATGAGCAAAAACTTCTTGCGCGATGTTGCCGATGCGCACGCGAGCATCAGCAATTGCAATGACGATGATGAGGACGATGACGAGGAGGATGCATCGATGCAATCGAATGTGGCACATGCCGATGCTGATCTGGATGATGATGATATGGAGCTGGAGCCGGAGCATGTTGCTGATGCCGGCAGCAGCAGTGCTGTTGCTGCCGTTGAGCAATCAGCAAGAACTGAAAGTGTTGCCGATGCACATGCGAATGCAGCAGCCGATGAAGATGAGGATGAGGATGATGTGGAGGAGGCGGCGATTGCTGCAACAGTTGCTGGCATCGATGTTGCTGCGGTAAGCAACTCCTCCTGCCACGCGCTGACTAGCATTAAAGCACTGCTGGATGAGCTGCAACGCCTACGCGCATTGGAGCAGACTCACCTGGTACAAATCCATCAGCTCGAGGAGCATCTAGAGGTGAAGCGTCAGCACATAATGCGACTGGAGGCGCGTCTTGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTGCGTGGCGTAGATGATGATGAGGATATGGAAGCGTCAACTCAGCACAACAATCGGCATGTGCTGAACAACGATGAGGAGCAGGAGGATGAGGAGTTGGAGGCCGATGGTGATGATGCCGATATGTCCAGTGCCGGCGCGACAGCAGAGAGCAGCAACGAGCTAAAAATCAAAAAGGAGCAACACAGTCCACTGGACCTGAATGTGCTCAGTCCACAGTCGGCCATCGCTGCCGCCGCCGCAGCCGCGGCAGCAGCTGCCTGCGCCAACGATCCCAACAAATTCCAAGCTCTGCTCCTGGAGCGGACCAAAGCTCTGGCCGCGGAGGCGCTCAAGAATGGCGCCAGCGATGCAGCCAGCGAAGTTGCCGAGGACAACAACAACAGTCTGACACCGAATGCAAATGCCGCCGCCGTGATGGCTGCACATGCACAGCATGCAGCCGCCGCTGCCCTGGGTGCGCCCAGTTTCTTGCCCAATTTACCCAATCTGCCCAGTTTGCCAGCATTCCAATTTGCAGCAGCCGCTGCAGCTGGACAGGATCCGCGTGCGCATTTCCGTTTCGCCGATGCCGAGCTGCAACTGCAGCCTGGCGTATCGATGGCCGGTCGCTTGGGTGAATCCCTGATACCCAAGGGTGATCCCATGGAGGCCAAACTGCAGGAGATGCTGCGCTACAATATGGATAAATATGCCAATCAGGCACTGGACACGCTGCACATCTCACGTCGTGTGCGGGAACTGCTCTCGGTGCACAACATTGGCCAGCGATTGTTTGCCAAATACATACTCGGCCTATCGCAGGGCACCGTCTCGGAGCTGCTCAGCAAACCGAAGCCCTGGGACAAGCTGACGGAGAAGGGACGCGACAGCTACCGCAAGATGCACGCCTGGGCCTGTGATGATAATGCGGTCATGCTGCTCAAATCGCTCATACCCAAGAAAGACTCCGGCTTGCCACAATACACTGGACGCGGCGCCGGGGGCGATGATTCCATGTCAGAGGATCGCATTGCACACATACTCAGCGAGGCATCGTCACTGATGAAGAGCAACGCTGATAAGATGGCGCGTCTGTATCAGGAGCTGATGGCGCGCACGCCACGCGAAGCTGCATTTCCAAGCTTCCTGCTGTCGCCCTTCTTTGGCGGCGCTGCCGGCATGCCGGGCGCAGCGGCCAATCACTTTCCCACCATGGCCGCCGACGAGAACATGCGACACGCCGTCGAGCGTGAGATTGCCAAGCTGCAACAGCAGCACCAGCAGCAGGCGGCGCAGGCACAAGCCGCCAGTTTCCCCAATTTCTCCAGTTTGATGGCACTGCAGCAGCAGGTGCTGAACGGCGCACAGGATCTGTCGCTGGCCGGCAAGGATATCAAGTTGAACGGTCAGCGCTCCTCCCTCGATGCCCTCAGCGGCAGCAGCAGCTCCAAGGATGGCGGCGAGCGTGGCGACGATGTTGTGGAGCGCAGCAGCTTCGGCTCATCTCGGCCACAGCATGCCATGAAATCCGAAGGTGGCGGCGGCAACACACCCGCACCCCCAGCACCACCAGCACCGCCAGCTCCAGCAGGCAGCAATCCCGTTGCTGTCGCTGCTGCCGCCGCTGCTGCCGCAGCTGCTGCTGGCAGCAACTCAGCAGCGCCAAGTCCCCTAAGCAATTCCATATTGCCGCCAGCTCTGAGCAGCCAAGGTGAAGAGTTTGCGGCCACAGCGAGTCCGTTGCAACGCATGGCCTCGATCACCAACTCGCTGATCACACAGCCCCCCGTGACGCCGCATCACTCGCAGCCGCAGCGACCCACCAAGGCGGTGCTGCCGCCCATTACGCAGCAACAGTTCGATATGTTCAACAACCTCAACACGGAGGACATTGTGCGTCGCGTCAAGGAGGCCCTCTCCCAGTACAGCATCTCACAGCGACTCTTTGGGGAGTCGGTGCTGGGCCTGTCGCAGGGCTCCGTCTCCGATCTGCTGGCCAGGCCCAAGCCATGGCACATGCTCACACAGAAGGGTCGCGAACCCTTCATACGCATGAAGATGTTCCTCGAGGATGAGAATGCGGTGCACAAACTGGTCGCCAGCCAGTACAAGATTGCGCCCGAGAAGCTCATGCGCACGGGCAGCTACAGCGGCAGTCCACAGATGCCCCAGGGCTTGGCCAACAAGATGCAGGCCACGCTGCCCATGCAGAAGATGATGAACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATATGCTGCTCACCTCGCCCGGCCTGCCGCCACAGCATGCAATCAGTTTGCCAGCGGCTAGCACGCCCGTCAGCGGTGTCAGCGTTGTGCCCGGTGGCAACACAGTCGGAGGCGGCTCCAGCTCGGAGAAGAAACCAATGCTGATGCCCGTGCATGGCGGCGCACATGGCCCCAATGCCATGCGCAGTCTGCACCAGCACATGTCGCCCACAGTGTACGAGATGGCTGCCCTCACACAGGATCTGGACACGCACGACATCACCACCAAGATCAAGGAGGCACTGCTGGCCAACAACATTGGCCAGAAGATCTTTGGCGAGGCGGTGTTGGGTCTGTCGCAGGGCTCCGTGTCGGAGCTGCTGAGCAAACCCAAGCCGTGGCACATGCTGTCGATCAAGGGACGCGAACCCTTCATACGCATGCAGCTCTGGCTGAGCGATGCCAACAATGTGGAGCGACTGCAGCTGCTGAAGAACGAGCGGCGGGAGGCAAGCAAGCGACGCCGCAGCACCGGACCCAATCAGCAGGACAACAGCAGCGACACGTCCAGCAATGATACAAATGATTTCTATACAAGCAGTCCGGGACCCGGCTCGGTGGGCTCATCCGTTAGCGGAGCCCCGCCAAGCAAGAAGCAACGTGTGCTCTTCTCCGAGGAGCAAAAGGAGGCACTCCGCTTGGCCTTTGCCCTCGATCCGTATCCGAATGTCGGCACCATTGAGTTTCTGGCCAACGAGCTGAGTCTGGCCACGCGCACCATCACCAACTGGTTCCACAATCATCGCATGCGCCTCAAGCAGCAGGTGCCACATGGCCAGCCAGGCCAGGATAATCCCATACCCAGTCGCGAGAACACCAATGCCACGCCCTTTGATCCCGTCCAGTTTCGCATACTCCTCCAGCAGCGTCTCGTCGAGCTGCACAAGGAGCGCATGGGCCTAAGCGGTGCGCCCATACCATACCCACCGTACTTTGCTGCGGCTGCTCTGCTTGGTCGCAGCTTGGCCGGCATACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGGGCGCCGCTGGCGGCGATGAACTGCAGGCTCTTAATCAGGCATTCAAGGAGCAAATGAGCGGCCTGGATCTGTCCATGCCGACGCTGAAGCGCGAACGCAGCGATGACTATCAGGATGAGCTGGAGCTGGATGCCAGTGCGCACAATATGAGCGACAATGAATCACTCGAGGGTGCTGGCCACGAGTCGCAGCTGGACAGCTCTGCCGTCTCCGAGTACGAGAAGGTATTGCAGAAGTCAGCGCTGGCCTCGGCTGCGGCTGCCGCCGCGTACATGAGCAATGCGGCACGCAGCTCCAGGCGCAAGCCCGCTGCACCACAGTGGGTCAATCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCAGTGGGGAGAACAGCAGCAGCAGTGAGCGCATCATCAACGGCGTCTGTGTCATGCAGGGATCGGACTACAGTCGCGACGATGGCGACAGTGTCAAGGGGGATGCGGGCGGCGATGCCGAGCATGCGGATCATTCGCATCTGGAGATCGAACAGAGTTTCATGGAGCCCGAGGTGCACATCAAACAGGAGGAGGACGATGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAACTTTTAA
Protein Sequence
MSKNFLRDVADAHASISNCNDDDEDDDEEDASMQSNVAHADADLDDDDMELEPEHVADAGSSSAVAAVEQSARTESVADAHANAAADEDEDEDDVEEAAIAATVAGIDVAAVSNSSCHALTSIKALLDELQRLRALEQTHLVQIHQLEEHLEVKRQHIMRLEARLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGVDDDEDMEASTQHNNRHVLNNDEEQEDEELEADGDDADMSSAGATAESSNELKIKKEQHSPLDLNVLSPQSAIAAAAAAAAAAACANDPNKFQALLLERTKALAAEALKNGASDAASEVAEDNNNSLTPNANAAAVMAAHAQHAAAAALGAPSFLPNLPNLPSLPAFQFAAAAAAGQDPRAHFRFADAELQLQPGVSMAGRLGESLIPKGDPMEAKLQEMLRYNMDKYANQALDTLHISRRVRELLSVHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAVMLLKSLIPKKDSGLPQYTGRGAGGDDSMSEDRIAHILSEASSLMKSNADKMARLYQELMARTPREAAFPSFLLSPFFGGAAGMPGAAANHFPTMAADENMRHAVEREIAKLQQQHQQQAAQAQAASFPNFSSLMALQQQVLNGAQDLSLAGKDIKLNGQRSSLDALSGSSSSKDGGERGDDVVERSSFGSSRPQHAMKSEGGGGNTPAPPAPPAPPAPAGSNPVAVAAAAAAAAAAAGSNSAAPSPLSNSILPPALSSQGEEFAATASPLQRMASITNSLITQPPVTPHHSQPQRPTKAVLPPITQQQFDMFNNLNTEDIVRRVKEALSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGSYSGSPQMPQGLANKMQATLPMQKMMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMLLTSPGLPPQHAISLPAASTPVSGVSVVPGGNTVGGGSSSEKKPMLMPVHGGAHGPNAMRSLHQHMSPTVYEMAALTQDLDTHDITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQLLKNERREASKRRRSTGPNQQDNSSDTSSNDTNDFYTSSPGPGSVGSSVSGAPPSKKQRVLFSEEQKEALRLAFALDPYPNVGTIEFLANELSLATRTITNWFHNHRMRLKQQVPHGQPGQDNPIPSRENTNATPFDPVQFRILLQQRLVELHKERMGLSGAPIPYPPYFAAAALLGRSLAGIXXXXXXXXXXXXXXXXVGAAGGDELQALNQAFKEQMSGLDLSMPTLKRERSDDYQDELELDASAHNMSDNESLEGAGHESQLDSSAVSEYEKVLQKSALASAAAAAAYMSNAARSSRRKPAAPQWVNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGENSSSSERIINGVCVMQGSDYSRDDGDSVKGDAGGDAEHADHSHLEIEQSFMEPEVHIKQEEDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01550891;
90% Identity
iTF_01550176;
80% Identity
iTF_01550176;