Basic Information

Gene Symbol
osa
Assembly
GCA_018904165.1
Location
JAEIFS010000741.1:10000751-10015817[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.2 5.1e+03 -2.2 0.0 12 46 764 801 759 804 0.80
2 2 6.8e-25 1.6e-21 76.4 0.0 3 89 1012 1098 1010 1098 0.92

Sequence Information

Coding Sequence
ATGAATGAGAAAATAAAATCACCATCGGCACAGGGTGTAGGTGTAGGTGGCAGTGCTGGTGCCGGTAGTTCGGCTGGTGGAAACGTAATGCCAGCGGGTGCACCAAACGCAGGTGGCGCCACACCACCCACATCAGGTCCTCCTACACCAAACAACGGCAGTGATCCAACCATACAGCAAAGTAGTACTGTACCACAACCCTATGGTGCTCCGCCACCTGGCTCGGCACCTGGCGTACCTCCAGACCCAGCATCTGTAATGTCACACTACCACCATCTACACCAACAACAGCAGCAGCAGCAGCCACAACATCCGCAAGGTCCTCCATTGCCACCACACATGCAGCATCACGGTGGACCACCGCCGCCACAGGGACCACTACCACTTCCAGGAGCACCGGAGCATACACCTGGCGTGAAGGATGAATATGGCTCAGCACATTTGCCACCGCCACCCGGTGTTCAGCATCCGCATGCCCATCCCGCCTACGCGCGTTATCACTCAGGTGATCCCAATATCGATCCTTATCGCTACGGTCATGCGCCCTCTCAGCAACCACCGCCTGGAAGCAAACCGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGGTGCTGGAGGGTCACCGAATCGGCCACCACAACAGCGATATATACCCGGACAGCCGCCACAGGGTCCGACACCTACATTAAATTCATTGCTCCAATCGTCAAATCCGCCACCACCACCCCAACACCGTTACGCGAATAACTATGATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCCGGACCATTGCCCCCACTTCCGGGCCATGGACCGCCGCCACCGCAACACCAGCCATACGGTGCGCAACAGGGCGTCTGGGCGCCACCGCCAAGACCCTATAGCCCACAATTGGGCCCTTCACAGCAATATAGGACACCTCCACCGACAAACACTTCCAGAGGTCAATCACCATATCCATCAGCTCTCAGTCAAAATTCAGGTTCCTATCCCAGTTCACCACAACAACAACAACAGGCGCAACAGCAAGCTGCACAACAGTCAGGAGGTGTTGGAGCACCCGGGGCACCGGCACCACCGTCAGGTCCCACACAACAGCAACAACAACAACAGCAGCAAAACACTCCTCCCACTTCACAATATTCTCCATACCCGCAAAGATATCCAACACCACCAGGATTGCCTGCGGCTGGACCCAATCATCGTAATGCATACACAACGCACCAATATTCCGAGCCAAATCGACCGTGGCCCGGTGGGTCATCACCTAGTCCAGGCCCGGGCCATCCATTGCCGCCTGCCTCACCGCTCCATGCGTCTCTGCAACAACCACCTACGCATTCCAGTGCTGGTGGCCCGCCACCCAGCAGCAGTCCGGGGCATGCGCCGAGTCCATCTCCACAGCCCTCGCAAGCATCTCCTTCACCGCATCAGGAGCTGATTGGACAAAACAGTAATGATAGTTCGAGTGGTGGTGCCCATAGTGGTTTGGGGTCTGGGCCACCAGGCACACCGAACCCACAGCAAGTCATGAGACCTACACCTTCGCCTACTGGCTCATCAGGCTCACGATCAATGTCTCCAGCAGTGGCACAAAATCATCCAATCTCGCGCCCGGCGAGTAATCAGTCAAGTAGTGGGGGCCCAATGCAGCAACCACCATCGGTCAGTGGACCACCCCCAATGCCCCAGCATAGTCTACCAGGCGCACCACAATCACAGCAATCTCAGCAGCAGCAGGCTTCGAATTCAGCATCGTCCGCCAGTAATTCACCTCAGCAGACTACACCTCCCGCCCCGCCACCAAACCAAAATGTTAACAACATGGCAACACCACCACCCCCACCGCAAGGATCCACAGGTGGTTATCCTATTCCGCAGCATATGCATGGCAGTTACAAAATGAGTGGACCCGGACAAAGTCCCGGCGCTCAAGGATATCCCCCACAACAATATCCACAAGGTAATTATCCTCCACGACCGCAATATCCGTCGGGTGCTTATGCAGCTGGACCACCACCTCCGCCAACTAGCCAAGCCGCTGGCGGAGTTAACAATATGTCATCTGGCGCACAAAGTGGTTATCCTCGATCGATGCCTAACCACAGTGGTAGTAGCCCTCATCCACAGTATCCACCATATCAGTGGGTGCCGCCAAGTCCGCAACAAACTGGGCCTGGTGTCGGATCCGGACAAATGGGCAGTTCTATGGGCAACCATGTGCAAGGAAAAGGCACACCTCCACCGGTTGGACCACCACCTCCCCAGGGAAGTGGTTCTCCGCGCCCTCTAAACTATCTGAAGCAGCATTTACAGCACAAAGGTGGTTACGTCGCCAACCCAGCAGCTCCTCAGCCACAGGGATATGGCAATGGACCGACTGCAATGCATCCAACAATGCCAATGGGTCCACCGCATCATATGGGCCCTCCGCAAAGTATGGGACCGCCAACTAGCACACCGCCGCAGTCCATGCTGGGTGCGCAGCCTGTAAGTGACAGTGGTCCAGAGCATATATCGCAGGACAATGGTATAAGTTCGTCCGGGGCATCTTCGGCCTCGAACTTGCATGCCGTGACTGCAGTAGTTACAACTGGTCCAGATGGTACCCCAATGGATGAAGTTAGTCAACAGAGCACACTGTCGAATGCATCGGCTGCATCAGGCGAAGATCCACAATGTACTACACCAAAGTCGCGCAAACATGATCCATACAGCCAAAGTCATTTAGCACCACCGAGCACATCTCCACATCCTGTTGTAATGCATGGCAGCAGTGGTCCCTCTGGCGAGGAATACGAAATGAATTCTCCACCAAATTGGCCACGTCCAGTTGCCAGTGCGCAGGTGTTCAATAGTCATGTTCCTGTTCAACAAGAACCATTTCGCAGCACTATTACTACAACCAAGAAGTCGGACTCGCTCTGTAAACTATACGAGATGGATGACAATCCAGATAGACGCGGTTGGCTAGATAAATTGCGGGCTTTTATGGAAGAACGTCGGACGCCGATAACGGCTTGTCCAACCATCTCAAAACAGCCACTCGATTTATATAGGTTATACATTTATGTAAAAGAACGTGGCGGATTCGTCGAGGTATGCAAGGTAACAAAGAGCAAGACCTGGAAGGATATAGCTGGTCTGTTAGGAATTGGCGCTAGTAGCAGTGCTGCATACACTCTTCGCAAACATTACACAAAGAATCTTTTGGCATTCGAGTGTCACTTTGATCGAGGCGACATCGATCCATTACCTATCATACAACAGGTTGAGGCTGGTAGCAAGAAAAAGACAACGAAAGCACCATCTGTGCCCTCACCAGGGTCGTCAAACTCACAGGATTCTTTCCCGGCTCAGCCTGGCGGTGGTCCGAACACACCCATTGATGGTTACCAGGGCTACACAGGCAGTGGTGCCTATCCCTCACCTGCTGTTCCCCAACCAGATTATGGTGGACAGGGGCAGATGCAGAGACCCCCCTCTCAAAGCAACTCCCAGCCACCTCATCCTGGCACTCAAAATCAAACAGCCGCCGCTGTTGTTGCTGGTGATAACATAAATGTGAGCAATCCCTTTGATGATCCAATTGCTGGCGGTGTGGCTGCTGGTGGTGTAGCTGCTGCTGCTGGAGTTGTTGGTGGTCCGTCACACGGTGCTCCTCCACCGCCCCCACATTCACCGCACACAGCGCCACAATCAAACAATCAACACCACCAACAAGGCATTCCAACGCAGTTGCCGCCGCCGTCACAGCAACCACCGGCGCCACCACCACAGCAACATGGTCCGCCATCGACTCAGCATGCGCGCCCTGCAACTGGAGTACCCTATCCACAGGGTACCTCTGGGTACCCATCGCCTGTGTCTAGAACGCCAGGCTCACCCTATCCAACACAACCTGGTGCTTATGGTCAATATGGTTCCAGCGATCAGTATAATTCCGGCGCCCCACCGGGCCAGCAGTTTGGACCAAATCAGGGACAATATCCGCCGCAGAACCGCAATATTTATCCTCCTTATGGGCCTGAAGGGGAAGCTCCCCCAGCTGGCGCTAATCAATATGGACCGTATGGTAGTCGACCATATAGCCAGGTACCGCCTTCTGGTCCACAACCATCAGCACAGGCCGTTGCTGGTGGGCCACCAGCTAGTGGAACTCCAGTAGCACCACCGAATAGTGGCTATCCACCAGGGACTCCTAATCAACAAGATTATTACAGACCTGATCAAAGTCCTCAACCTCGTCGACATCCTGACTTTATCAAGGATTCGCAGACCTACTCAGGCTATGGTGCACGCCCCCAAATTTATGGTGGCTGGCAAGGTGGTAACCAACAGTATCGTCCCCAATATCCTACATCGTCGGCACCTCAGTCTTGGGGAAACGCACCACCACGTGGTGTTACACCACCTGGCGGCCCTCATGGTCCACACGGACAACAACCAACGGGTGTAGCTCAGTGGGATCAGCATCGGTATCCACCTCAGCAGCCCCCACAACCACCACAACAACAGCAGCCACCTTACCAGCAGGGTGCTCCACCTGGACAGCAACCTCAACAGCAGACGGCACCTCAATGGGCGCAAATAAATGCTGTGCAAGCACCTCCACAGGCGAATATTGCGCAACCAGGATCATCGCTACGACCGCCTCTTGTAAATGCACAGCAACAGAGGATTTCCAATGTTGTCCCCGTTATGTCGCCACAACAGCCGCAAGGGGCACCACAGACAGGGGCACAGCAGCCACCACATGGAGGTGTACCACCATCAAGCTTGCCACCAGTGGCTGGTGGTGTCTTGGCGAAACCTCCATATGCTATGCCACCCCCGTCTCAAGGTGGGGGCGTACCACCAGGTCCGGCAATGGTACCAGGTGTTCCTGGCAACATGATCCCTCAAAAGCCACCGCCGATCATTGGACAGGTCATGCAGCCGACACAGCAACAACAGCCTCCGCACCACTTGGCCACCCAGCAACCTGCTTATGGAGCCCAAGTACCTGGTGCCGGAGGTCAGCTGGTTAAAAAGGAGCTCATATTTCCACACGATAGTGTGGAGTCAACCACTCCGGTGCTATATCGGCGTAAACGCCTTACAAAGGCTGACGTCTGTCCCGTCGATCCGTGGAGAATTTTTATGGCAATGCGATCTGGTCTACTGACTGAGTGTACTTGGGCATTAGATGTCCTCAATGTACTTCTATTTGATGATTCTACAGTCCAGTTCTTCGGTATATCAACTCTACCTGGCCTACTAACCCTGCTGCTTGAGCACTTTCAAAAAAATCTGGCTGAAATGTTTGATGAACGCAGCGATGAATCAGTAGATGAGGCAGACGACGATGCGGATAGTGGTACCGTTATATCGTTGCAAGCTGAAGATAAATTGCGCCGTCGACGACAACCACGTTGTGTGCGCAGCATATGCAGTTACAACAGGAGACGACACTATGAGAATATGGATGTAAAACGCGCCAGCAGGAGTGAAGATTGTGCGGCAGACGACGATGATGAGGGTATCGATTTGGGGCAAGTACGTGTCCAACCGAATCCCGAAGATCGTTCCCTGCTCCTTTCGTTTACACCCAATTACACTATGGTTACGCGGAAAGGCGTTCCAGTTCGCATTCAGCCGGCCGAACAGGACATTTTCATCGACGAGCGTCAGAAGTCTTGGGATATAGATACAAATAAGCTGTATGAGCAACACGAGCCCGTGGGCTGTAGTGCATGGACTTATGGGTTTACAGAACCCGATCCACTCGATGGTATTATCGATGTGTTTAAATCAGAGATTGTTAACATTCCATTTGCGCGATATGTGCGCACCAAACACAAGGGCAAGCAGGAAATCACACAGAAAAGAAATCATAATAATGGTATTCGATCTGACGATGATTCAGCGTCTGTCCATCTGAAACAGGAGGACACAACAAGCAGTACCGAGGATAGCGGCCTACTGCAGCAGACGTACAATAAAAAGAGACGACATGTGAGCAGTAGTTGTACAGGCAGCGGAGCCGATATTAAGAAGTCAAAGGTGCAAGAAGAATTTGCCCAGCCGGTTGCCGAAGTGAAGAAAGAGTCAGAGACAGAGACTGTGGATTATGATAATGAAGGCGTAGGGGGTACCAGCTCAACGGACAGTGATTGCCGAGCTGTTGATATGGACATTGAATCACCGCAACAGCAACGTCTTACAAATGGAGTTGCCACGCAATCACGATCGGAACCCAAGGGATTCGATCCCAAATTAACTATACGCGATGATGCGCAAGTTTTACAGCGCCGACGCGACTCCAGTTACGAGGATGAGTGCTACACAAGAGACGAAGCTTCCTTATATTTGGTAAACGATAGTCAGGACTCATTAGCACGTCGCTGTATCGCCCTCTCGAATATCTTTCGTAATTTGACGTTTGTACCAGGCAATGAGACAGTGCTTGCGAAATCGACTCGATTTTTGGCAGTACTTGGGCGTCTGCTGTTGCTTAATCACGATCATTTGCAGCGCACTCCCAAGACCCGAAACTACGATAGAGAGGAGGATTCTGATTTTACGGACTCTTGCAGCTCGCTCCAAGGTGAACGCGAATGGTGGTGGGAATATTTAATCACGATAAGGGAAAACATGCTCGTATCCATGGCGAACATTGCTGGTCATCTAGAGCTTTCCCGGTACGATGAATTAATAGCACGTCCGCTTATTGATGGACTTCTCCACTGGGCTGTATGTCCAAGTGCACATGGACAAGATCCGTTCCCATCATGTGGACCAAACTCAGCGCTATCGCCACAACGACTGGCATTAGAGGCATTATGTAAATTGTGCGTAACAGATGCCAATGTTGATCTGGTGATTGCGACACCTCCGTTTTCACGCCTGGAGAAATTATGTGCTGTGCTTACGCGTCACTTATGCCGCAACGAGGATCAGGTGCTGCGCGAATTCTCTGTCAATTTACTGCACTATCTTGCAGCCGCAGACAGTGCGATGGCCCGCACAGTCGCCCTACAGTCACCTTGCATTTCCTATCTGGTGGCATTCATTGAGCAGGCCGAACAAACAGCTTTGGGTGTGGCCAACCAGCATGGAATCAACTATTTACGCGAAAATCCTGATTCAATGGGTACCAGTTTGGATATGCTACGTCGAGCCGCTGGCACATTACTCCACTTGGCCAAGCATCCGGATAACAGATCGTTATTTATGCAGCAGGAACAGCGGCTGCTTGGATTGCCCACGGCGGCACCTCCACCAACAAATGCAAATACAACCGCGGCAGTTGCGTAG
Protein Sequence
MNEKIKSPSAQGVGVGGSAGAGSSAGGNVMPAGAPNAGGATPPTSGPPTPNNGSDPTIQQSSTVPQPYGAPPPGSAPGVPPDPASVMSHYHHLHQQQQQQQPQHPQGPPLPPHMQHHGGPPPPQGPLPLPGAPEHTPGVKDEYGSAHLPPPPGVQHPHAHPAYARYHSGDPNIDPYRYGHAPSQQPPPGSKPPXXXXXXXXXXXXXQGAGGSPNRPPQQRYIPGQPPQGPTPTLNSLLQSSNPPPPPQHRYANNYDSXXXXXXXXXXXXXXXXXXXXXXXXXXXAGPLPPLPGHGPPPPQHQPYGAQQGVWAPPPRPYSPQLGPSQQYRTPPPTNTSRGQSPYPSALSQNSGSYPSSPQQQQQAQQQAAQQSGGVGAPGAPAPPSGPTQQQQQQQQQNTPPTSQYSPYPQRYPTPPGLPAAGPNHRNAYTTHQYSEPNRPWPGGSSPSPGPGHPLPPASPLHASLQQPPTHSSAGGPPPSSSPGHAPSPSPQPSQASPSPHQELIGQNSNDSSSGGAHSGLGSGPPGTPNPQQVMRPTPSPTGSSGSRSMSPAVAQNHPISRPASNQSSSGGPMQQPPSVSGPPPMPQHSLPGAPQSQQSQQQQASNSASSASNSPQQTTPPAPPPNQNVNNMATPPPPPQGSTGGYPIPQHMHGSYKMSGPGQSPGAQGYPPQQYPQGNYPPRPQYPSGAYAAGPPPPPTSQAAGGVNNMSSGAQSGYPRSMPNHSGSSPHPQYPPYQWVPPSPQQTGPGVGSGQMGSSMGNHVQGKGTPPPVGPPPPQGSGSPRPLNYLKQHLQHKGGYVANPAAPQPQGYGNGPTAMHPTMPMGPPHHMGPPQSMGPPTSTPPQSMLGAQPVSDSGPEHISQDNGISSSGASSASNLHAVTAVVTTGPDGTPMDEVSQQSTLSNASAASGEDPQCTTPKSRKHDPYSQSHLAPPSTSPHPVVMHGSSGPSGEEYEMNSPPNWPRPVASAQVFNSHVPVQQEPFRSTITTTKKSDSLCKLYEMDDNPDRRGWLDKLRAFMEERRTPITACPTISKQPLDLYRLYIYVKERGGFVEVCKVTKSKTWKDIAGLLGIGASSSAAYTLRKHYTKNLLAFECHFDRGDIDPLPIIQQVEAGSKKKTTKAPSVPSPGSSNSQDSFPAQPGGGPNTPIDGYQGYTGSGAYPSPAVPQPDYGGQGQMQRPPSQSNSQPPHPGTQNQTAAAVVAGDNINVSNPFDDPIAGGVAAGGVAAAAGVVGGPSHGAPPPPPHSPHTAPQSNNQHHQQGIPTQLPPPSQQPPAPPPQQHGPPSTQHARPATGVPYPQGTSGYPSPVSRTPGSPYPTQPGAYGQYGSSDQYNSGAPPGQQFGPNQGQYPPQNRNIYPPYGPEGEAPPAGANQYGPYGSRPYSQVPPSGPQPSAQAVAGGPPASGTPVAPPNSGYPPGTPNQQDYYRPDQSPQPRRHPDFIKDSQTYSGYGARPQIYGGWQGGNQQYRPQYPTSSAPQSWGNAPPRGVTPPGGPHGPHGQQPTGVAQWDQHRYPPQQPPQPPQQQQPPYQQGAPPGQQPQQQTAPQWAQINAVQAPPQANIAQPGSSLRPPLVNAQQQRISNVVPVMSPQQPQGAPQTGAQQPPHGGVPPSSLPPVAGGVLAKPPYAMPPPSQGGGVPPGPAMVPGVPGNMIPQKPPPIIGQVMQPTQQQQPPHHLATQQPAYGAQVPGAGGQLVKKELIFPHDSVESTTPVLYRRKRLTKADVCPVDPWRIFMAMRSGLLTECTWALDVLNVLLFDDSTVQFFGISTLPGLLTLLLEHFQKNLAEMFDERSDESVDEADDDADSGTVISLQAEDKLRRRRQPRCVRSICSYNRRRHYENMDVKRASRSEDCAADDDDEGIDLGQVRVQPNPEDRSLLLSFTPNYTMVTRKGVPVRIQPAEQDIFIDERQKSWDIDTNKLYEQHEPVGCSAWTYGFTEPDPLDGIIDVFKSEIVNIPFARYVRTKHKGKQEITQKRNHNNGIRSDDDSASVHLKQEDTTSSTEDSGLLQQTYNKKRRHVSSSCTGSGADIKKSKVQEEFAQPVAEVKKESETETVDYDNEGVGGTSSTDSDCRAVDMDIESPQQQRLTNGVATQSRSEPKGFDPKLTIRDDAQVLQRRRDSSYEDECYTRDEASLYLVNDSQDSLARRCIALSNIFRNLTFVPGNETVLAKSTRFLAVLGRLLLLNHDHLQRTPKTRNYDREEDSDFTDSCSSLQGEREWWWEYLITIRENMLVSMANIAGHLELSRYDELIARPLIDGLLHWAVCPSAHGQDPFPSCGPNSALSPQRLALEALCKLCVTDANVDLVIATPPFSRLEKLCAVLTRHLCRNEDQVLREFSVNLLHYLAAADSAMARTVALQSPCISYLVAFIEQAEQTALGVANQHGINYLRENPDSMGTSLDMLRRAAGTLLHLAKHPDNRSLFMQQEQRLLGLPTAAPPPTNANTTAAVA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2