Basic Information

Insect: Zaprionus bogoriensis
Gene Symbol: L
Assembly: GCA_035046045.1
Location: JAWNOI010000098.1:641121-651270[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 1e-05 0.00066 19.8 2.9 1 23 166 188 166 188 0.98

2 17 0.36 23 5.5 6.2 1 23 194 216 194 216 0.97

3 17 1.7e-07 1.1e-05 25.4 3.2 1 23 222 244 222 244 0.99

4 17 1.3e-05 0.0008 19.5 0.4 1 23 250 272 250 272 0.99

5 17 0.1 6.4 7.3 0.5 2 23 354 378 353 378 0.91

6 17 0.0057 0.36 11.2 1.1 2 23 412 434 411 434 0.95

7 17 0.063 4 7.9 0.7 1 23 521 543 521 543 0.97

8 17 0.0035 0.22 11.8 0.1 2 23 551 572 550 572 0.92

9 17 0.0042 0.26 11.6 0.1 1 23 580 605 580 605 0.88

10 17 5.2 3.3e+02 1.9 1.6 2 23 641 663 640 663 0.95

11 17 0.0026 0.16 12.3 1.1 1 23 722 745 722 745 0.97

12 17 0.0017 0.1 12.9 1.8 2 23 925 947 924 947 0.96

13 17 0.12 7.4 7.1 0.1 1 23 953 975 953 975 0.92

14 17 0.49 31 5.1 0.5 2 23 983 1004 982 1004 0.96

15 17 0.75 48 4.5 0.5 2 23 1116 1137 1116 1137 0.94

16 17 0.037 2.3 8.7 0.0 1 23 1147 1169 1147 1169 0.96

17 17 0.00022 0.014 15.6 1.2 1 23 1174 1196 1174 1196 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	1e-05	0.00066	19.8	2.9	1	23	166	188	166	188	0.98
2	17	0.36	23	5.5	6.2	1	23	194	216	194	216	0.97
3	17	1.7e-07	1.1e-05	25.4	3.2	1	23	222	244	222	244	0.99
4	17	1.3e-05	0.0008	19.5	0.4	1	23	250	272	250	272	0.99
5	17	0.1	6.4	7.3	0.5	2	23	354	378	353	378	0.91
6	17	0.0057	0.36	11.2	1.1	2	23	412	434	411	434	0.95
7	17	0.063	4	7.9	0.7	1	23	521	543	521	543	0.97
8	17	0.0035	0.22	11.8	0.1	2	23	551	572	550	572	0.92
9	17	0.0042	0.26	11.6	0.1	1	23	580	605	580	605	0.88
10	17	5.2	3.3e+02	1.9	1.6	2	23	641	663	640	663	0.95
11	17	0.0026	0.16	12.3	1.1	1	23	722	745	722	745	0.97
12	17	0.0017	0.1	12.9	1.8	2	23	925	947	924	947	0.96
13	17	0.12	7.4	7.1	0.1	1	23	953	975	953	975	0.92
14	17	0.49	31	5.1	0.5	2	23	983	1004	982	1004	0.96
15	17	0.75	48	4.5	0.5	2	23	1116	1137	1116	1137	0.94
16	17	0.037	2.3	8.7	0.0	1	23	1147	1169	1147	1169	0.96
17	17	0.00022	0.014	15.6	1.2	1	23	1174	1196	1174	1196	0.97

Sequence Information

Coding Sequence: ATGATGGCCCTAAAGATGTTGTATCGCGGTCCCAGTTCGCGTTTGGAGAACTTAATCGAAAAGATTCAGGCTACCAAGGAGATTACGAACAACGACATGTACAGCACGCACACCTCGTCCAGCTACTCGCCCAGCATCTCGGACGGCACACTGACGCCCAACTCACTGCAGCCTGCCGCGGGCACGGAGGAGCCCAAGGCAAATGGCGACTCGGCAGCCGGCAAGAGCGAGGAGGAGCGGGAGCGCGACCGGGAGCCTGCCAAGGCGAAGCGCCCCGCCCACTTgcaccaccatcatcatcatcattaccACCATCAGCAGGCGCTCAAACTTGCCAACAAGCTGCGCAAAATCAATAAGGAAGCCAAGCTTGCAACGGCAGCAGGCGgggcaggcggagcagcaggcatggcagcagcagcagcggcaggagcgGCAGCCACAAAGTTTGATAAGTTGACAGGCGATGGCATTAAGAGTCGCGGCGACGGCTCCTATCAGTGTCAGTTCTGTGATAAGTCATTTCCGCGCCTCGGTTACTTGAAGCATCACGTTCAGAGCCACGCCGAGCACTTGCCCTTCAAGTGCGAGTACTGCGCCAAGCTGTTCAAGCACAAGCGCTCCAGGGATCGCCATAAGAAGCTCCACACCAACGAGCGGAACTACAAGTGTCCGCACTGCGAGGCGGCCTTCTCCAGAAGCGATCACCTGAAGATCCACATGAAGACCCATGACATCCAGAAGCCCTTCCAGTGCAGCATGTGCAACCGTGGCTACAacacggcggcggcgctgacGTCGCACATGCAGAAGCACAAGAAGAACGCGGCGATACTGGCGGCAGGGGGCAATCCCAATGCACTCAACTACAGTCCCAGATCGACGGGCTCCGCGTCGATCTCCTCGAGCGGAAGCCTGCACAAGCGGCGCTACGCGCTGGCACTCGCCTCCGACAGCAGCCCCAGTCGCATGGAGTTCCCCAAGCGAGCGCGTGCAGCGGCCGCAGCTATGCCAACCACGCCCACACCGAGTGCGACGCCCACGCCGactcagctgctgcgctgcagctacTGCCCCAAGCCGACGGAGTTCGCGAGTCTCGAGCAGCTCAATGCGCATCTGCAGCACACGCacgagtcgcagcagcaggcgcgagAGGCACGAGAGGCAAGGGAGGCACGGGAGGCGCGGGAGCCGGCGGCACTGCTGGACTCTGGCAATGGCTTCCAGCTGAGCTGCGAGTACTGCACCATGCGGTTCCACAACATCGCCGGGCTGTTCCAGCACATGAGGGCGACGCACCTGGACCGCCTGAGCAGTCCGAACTCCTACTACGAGCACTTCAATCGCCTGGCCACGGCGGGCACCTTCAGTCCGCGCTtggcgctggagctgcccAAGCAGCTCAAGCAGGATCTGCCCAGTCCGCACAagcccgagcagcaggagctgcccaCCGATctgagcagcaacaagcgcCGCACGCTGACACCGCCcggagcaggcggagcagctcCGGCGCCTGCGCCTTCCGCCTCCGCTCCCGCTCCGCCTGGCATCTTCTTCTGCAATCAGTGCAACGCCGGCCTGCCGGACTTCGAGAGCTTCCGCAACCACCTGAAGAGCCACATCGCCGAGGGCATGCAGCTCGTCTGCCCGCACTGCGGCCTCAGCCTGCCCGAGCAGAGCGAGTTCGAGCGGCACGTGGTGGCGCACTTCCTCATCGCCGGCAGCGAGTTCAACTGCAGCGTCGCCAGCTGCGGCAAGTCCTACGCCAAGGcggacgagctgcagcagcatctcggCCAGGAGCACGTGCTCACGCTGCTCAAGTGCGGCATCTGCGCGGAGCTCTGCGAGAACCGCATGGCCATGCAGCTGCATCTGGCCTGCGCGCACAGCCAGGAGAcgaagctgctgcgctgcagcgcctgcctCGAGCTCTTCCGCAACGACACGGACTTCCATGTGCACGTCAAGACCCGGCATCAGCTGGTCACCCCCGgcgcaggagcaggcgcagcagcaggcccagGCGCTGGCCCAGTTGCTCCGACTGGCGCACCCGGCAGCACGGCCGGCACGCTGCAGTGCATGTTCTGCCGCGCCGTCTGCGCCTCCGAGCTGGAGATGCACTTCCATCTGGCGGCGCATGCGCGTCAGTTCCGCTGCCCCTCCTGCCCGGAGACCTTCCACGTGGAGTTCCTGCTGGACAGGCACATGCAGAGCCAGCACGGCcaggagcagaaggaggccgcagcagctggcgcggcAGCTGGAGCCGGCTCGCCCAGCATGGGCAGCCTCTATGTGaacgcgctgctgccgccgctggcagccgctgcagccgctgccgccgcggcgaccaacaacaacagcagcctgCACATCGACTACAATCAGGCCTTCAAGGGGCTCTTCGCGGGAgcaggcgccgctgcagcgggcgctggcgctgccggcaAGTTCTACAGTCCGCTGCAGGTGGACACCAGCGGGCtgaagccgcagcagcagtcgcagccgcatcCCGCGCTCATGTACGGCCTGAGCCAGCGCTACCTCATGGAGATGTACGCGGCCAAGGCGAGTTCgccggctgcggcagcggcggcaccaTCCGCTGGGCCCACCGAGCTGGCcgcgccggcgccggcagcgagtGGCGCGCAGCTGAGCTGCGGCATGTGCGAGCGGCAGGATCTGCGCAGCGAGGCGGAGCTGCACTCGCACCGCAAGCTGGCGCACAACCTGAAGACGGGCGTCAGCCTGCGCTGCGCCTACTGCTCGGGCAACTTCAAGTCGCGggcggagctggagcagcacatGAAGAGCTGCCACAACTCGAGCGGCAAGCACAAGTGTCTCATCTGCGACGAGATCTTCCCCTCGCCGGCGATACTCGCCGAGCACAAGCTGCAGCACTCCAAGGTGGGGCAGTCGGGCAAGTGCGCCCACTGcggcctgcagctggagcacgTGGCCGCCTTCAGGGCGCATCTCTCGGAGCACGGCGGCGATGGCAGCCTGCCGCTGGCCTGCATCTGCTGCCGCCAGACGCTGCACTCGGAGTTCGAGCTGAGCCTGCACGCCAAGTTCCACACGAAGTCCGCCAATGGAGGCGTGGGCTCCGGCAGCCTGCTGGAGCCTGTCTGTGCGCTCTGCCTGGAGCCGCTGCCGGGCGCGGGCGAAACCGCGAAGCTCTGCGAGAAATGCTGCCGCAAGCACAATCTGAACGGCAAGCGCCCCGGCAAGGAGGCAGTtgctccgccgccgccgccgccgtcgtcagctgcagcagcagcgaatgcCGGCGCGCAGTCCGGCTCCGTCTACCTGGAGAACCGCTGCAATCTCTGCAAGATGATACTGCCGCACGCGCAGAAGCTGCAGGAGCACCTGGTGGAGCACACGTTCGCCGGCACCGAGCAGCGCGGCTTCAACTGCTACATCTGCTCCGCCGTCTTCACCGCGCCCGCCGGCCTGCTCAGCCACATTGCGGAGCACGGCGCCAGGCCCTACGACTGCAACCTCTGCCCGGAGAAGTTCTACTTCCGCGCCGAGCTGGAGCACCATCAGCGCGCCCACGAGCTGCGGCCTGCTGCCCCGCCTGCTCCCGTTCGCCTGgccaagcaggagcagctcagCTCGCCGCAGCTGGCGCCCAGTCCCAGTCATGTCAAGCAGGAGCTCTACGAGCCGGACGCACTGCCCGCCTCCCCGCCAGccatagacagagagagagaacgggaGACTGTCCAGCCGCagcccgaggaggaggagtacaTCGAGGTGGAGCAGATGCCGCACGAGACGCGCTCCGGCGAGCTGCTGACCGCCGGCCACACCGagcgctccagcagcagcgcctga
Protein Sequence: MMALKMLYRGPSSRLENLIEKIQATKEITNNDMYSTHTSSSYSPSISDGTLTPNSLQPAAGTEEPKANGDSAAGKSEEERERDREPAKAKRPAHLHHHHHHHYHHQQALKLANKLRKINKEAKLATAAGGAGGAAGMAAAAAAGAAATKFDKLTGDGIKSRGDGSYQCQFCDKSFPRLGYLKHHVQSHAEHLPFKCEYCAKLFKHKRSRDRHKKLHTNERNYKCPHCEAAFSRSDHLKIHMKTHDIQKPFQCSMCNRGYNTAAALTSHMQKHKKNAAILAAGGNPNALNYSPRSTGSASISSSGSLHKRRYALALASDSSPSRMEFPKRARAAAAAMPTTPTPSATPTPTQLLRCSYCPKPTEFASLEQLNAHLQHTHESQQQAREAREAREAREAREPAALLDSGNGFQLSCEYCTMRFHNIAGLFQHMRATHLDRLSSPNSYYEHFNRLATAGTFSPRLALELPKQLKQDLPSPHKPEQQELPTDLSSNKRRTLTPPGAGGAAPAPAPSASAPAPPGIFFCNQCNAGLPDFESFRNHLKSHIAEGMQLVCPHCGLSLPEQSEFERHVVAHFLIAGSEFNCSVASCGKSYAKADELQQHLGQEHVLTLLKCGICAELCENRMAMQLHLACAHSQETKLLRCSACLELFRNDTDFHVHVKTRHQLVTPGAGAGAAAGPGAGPVAPTGAPGSTAGTLQCMFCRAVCASELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQSQHGQEQKEAAAAGAAAGAGSPSMGSLYVNALLPPLAAAAAAAAAATNNNSSLHIDYNQAFKGLFAGAGAAAAGAGAAGKFYSPLQVDTSGLKPQQQSQPHPALMYGLSQRYLMEMYAAKASSPAAAAAAPSAGPTELAAPAPAASGAQLSCGMCERQDLRSEAELHSHRKLAHNLKTGVSLRCAYCSGNFKSRAELEQHMKSCHNSSGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCAHCGLQLEHVAAFRAHLSEHGGDGSLPLACICCRQTLHSEFELSLHAKFHTKSANGGVGSGSLLEPVCALCLEPLPGAGETAKLCEKCCRKHNLNGKRPGKEAVAPPPPPPSSAAAAANAGAQSGSVYLENRCNLCKMILPHAQKLQEHLVEHTFAGTEQRGFNCYICSAVFTAPAGLLSHIAEHGARPYDCNLCPEKFYFRAELEHHQRAHELRPAAPPAPVRLAKQEQLSSPQLAPSPSHVKQELYEPDALPASPPAIDRERERETVQPQPEEEEYIEVEQMPHETRSGELLTAGHTERSSSSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01559205;
90% Identity: -
80% Identity: -