Basic Information

Insect: Zaprionus bogoriensis
Gene Symbol: -
Assembly: GCA_035046045.1
Location: JAWNOI010000188.1:1436526-1438368[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.04 2.5 8.5 0.4 2 23 364 386 363 386 0.95

2 7 1.4e-05 0.00091 19.4 0.5 1 23 393 416 393 416 0.98

3 7 5.7e-07 3.6e-05 23.8 2.2 1 23 421 443 421 443 0.98

4 7 0.0002 0.013 15.8 0.2 3 23 450 471 449 471 0.91

5 7 1.1e-05 0.00069 19.8 0.7 1 23 477 499 477 499 0.99

6 7 6.7e-05 0.0042 17.3 2.5 3 23 507 527 506 527 0.97

7 7 8e-05 0.005 17.0 0.7 1 23 533 556 533 556 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.04	2.5	8.5	0.4	2	23	364	386	363	386	0.95
2	7	1.4e-05	0.00091	19.4	0.5	1	23	393	416	393	416	0.98
3	7	5.7e-07	3.6e-05	23.8	2.2	1	23	421	443	421	443	0.98
4	7	0.0002	0.013	15.8	0.2	3	23	450	471	449	471	0.91
5	7	1.1e-05	0.00069	19.8	0.7	1	23	477	499	477	499	0.99
6	7	6.7e-05	0.0042	17.3	2.5	3	23	507	527	506	527	0.97
7	7	8e-05	0.005	17.0	0.7	1	23	533	556	533	556	0.97

Sequence Information

Coding Sequence: ATGGAAATCGAAACCTGCGGCTTTATTATGAGCAGAGGTAGGGACTTTGAAAGTTTCCTCATGCGCTGCTCGCATTGCACCATAGACATGGAGCTGGAAAAGTGGCAGGAGTTTGTGCTACACCTACGCAGCACGCACGGTCCTCCCCCGCCAGCTGCAGTGGATGTGGTGAGCTGCGTGAAAATAGAAGCGATTGCAGTCGAGGAGCACTACGTTAAGGAGGAAGTGAATATTGAAACGGAGGCAGAGGAGCTAAAGCAACAGACTAAGCAGGAAATGTCAAGGCCGAGCTCGTCCATGTCGGAGTCGAGCTTGAGTGAAAACGAATCAACAGGAACGCCAAGTGAAgctgatgccgatgccgatgcggGAGCAGAAAACCAGGAGCTGAACACAGCTGCGAACTCGCCCACATATAAGTTCAATCCCAGCTTCTTTCGCCGCGATCCGCGCACTTTGCAGTTCATTGAGTCGTACAAGCATCAGGCCTGCCTCTGGAATCCTGCCGTGAGTGACTACAAGGATCCACTGGCATGCAAAGCGGCCTATCAACAAATGATCAGAGAGCTGGAATCGAAGACATCAGTGCTGTTCTCGGAGCATTCGCTGAAGGCAGCCATCAAGAAGCTGCACCTGCAGTACAAGACAGTGGAAAAGCGCAGTGGCAATGGCAGCCTGAAGCCCAATTCCGTGGCGCACGGTCActacgagagcagcagcttcctGAAGGCGTGCACAGATCAAATCAGTTCCTATAAGAACGGCATGCTGCAGTTGAATTTCACGAAGAGAAACAAACTCACAACGGACTTCATCCAACTCTATCGCAGCTTCCCGCTGCTCTACGACAGCAAGCACAAGGACTTCAACAGCATGAGTAGTCGCAGGCAGGCCTACGAGCAGATGACAGCCAGGACTGGAGCGCAGCAGGCCAATGTGCAGCACGACGATGTGTACCTGGCCATACAGTGCCTGCGACAGTGGTACTACAAGAGCACAAAGTATGCCTTCAGGGCGGCAAACGAGTCCGAGAAGTACTACCTGCGAGCCTGCACGTTTCTGCCGCCCAAAATGTACAAGCAGCGCTTGATGTGTGAAATCTGCCAGCAGGAAACCTCTTCGGATCATGTGCTGCAGGCGCACATGTACAAGGTGCACAATATTGGGGAGCTGCCGTTCAAGTGCACGCTGTGCGAGCGCAGTTTCGTCGGACGTGGGGATCTGTCGACGCACATGCAGCGCGTGCACATAGGGAAGACGCACAAGTGCAACTACTGCGAGCGCTCGTTTGCCGTCAACTCGGACCTGAGCCTgcacatgcgcacacacacgagcaaCAGCATCCTCTGCGAGCTGTGCGGCAAGGCGTTCAGGCTGAGATcacagctgaagctgcatGTGACCGCAATACACACAAAGATCAGAGCCTTCAAGTGCACCATGTGCCCGAAGGATTTCATCAAGAAAGTGGATCTGTCGGATCACATCAAGAGCCATCTGAATATACGCGACAAGATATGTGGCACATGCGGCAAGGGATTCACCAGTTGCCATGCGCTCATCCGACATCGCCAGATACACGCGGAGGTCAAGAAGTTCGCTTGCAAACTGTGTGACGCACGATTCTCGCAGTTCGTGGGCCTCAACTCGCACATGAAGCGCACACACAATATTGTGCGTAACAGTGCACAGAAACAAACAGAGACTGCAGTGGCAGAACAAACAATAAGTTGA
Protein Sequence: MEIETCGFIMSRGRDFESFLMRCSHCTIDMELEKWQEFVLHLRSTHGPPPPAAVDVVSCVKIEAIAVEEHYVKEEVNIETEAEELKQQTKQEMSRPSSSMSESSLSENESTGTPSEADADADAGAENQELNTAANSPTYKFNPSFFRRDPRTLQFIESYKHQACLWNPAVSDYKDPLACKAAYQQMIRELESKTSVLFSEHSLKAAIKKLHLQYKTVEKRSGNGSLKPNSVAHGHYESSSFLKACTDQISSYKNGMLQLNFTKRNKLTTDFIQLYRSFPLLYDSKHKDFNSMSSRRQAYEQMTARTGAQQANVQHDDVYLAIQCLRQWYYKSTKYAFRAANESEKYYLRACTFLPPKMYKQRLMCEICQQETSSDHVLQAHMYKVHNIGELPFKCTLCERSFVGRGDLSTHMQRVHIGKTHKCNYCERSFAVNSDLSLHMRTHTSNSILCELCGKAFRLRSQLKLHVTAIHTKIRAFKCTMCPKDFIKKVDLSDHIKSHLNIRDKICGTCGKGFTSCHALIRHRQIHAEVKKFACKLCDARFSQFVGLNSHMKRTHNIVRNSAQKQTETAVAEQTIS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -