Basic Information

Insect: Zaprionus bogoriensis
Gene Symbol: pita
Assembly: GCA_035046045.1
Location: JAWNOI010000007.1:87912-89963[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0033 0.21 12.0 0.2 1 23 250 272 250 272 0.94

2 9 1.7e-06 0.00011 22.3 2.0 1 23 278 300 278 300 0.94

3 9 9.8e-06 0.00062 19.9 1.2 1 23 306 328 306 328 0.99

4 9 0.00043 0.027 14.7 0.2 1 23 334 356 334 356 0.96

5 9 0.0001 0.0063 16.7 0.1 1 23 362 384 362 384 0.95

6 9 9.7e-06 0.00062 19.9 0.2 1 23 390 412 390 412 0.97

7 9 0.0035 0.22 11.9 5.7 1 23 418 440 418 440 0.98

8 9 0.044 2.8 8.4 0.0 2 23 476 497 475 497 0.96

9 9 0.0022 0.14 12.5 0.7 1 23 503 526 503 526 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0033	0.21	12.0	0.2	1	23	250	272	250	272	0.94
2	9	1.7e-06	0.00011	22.3	2.0	1	23	278	300	278	300	0.94
3	9	9.8e-06	0.00062	19.9	1.2	1	23	306	328	306	328	0.99
4	9	0.00043	0.027	14.7	0.2	1	23	334	356	334	356	0.96
5	9	0.0001	0.0063	16.7	0.1	1	23	362	384	362	384	0.95
6	9	9.7e-06	0.00062	19.9	0.2	1	23	390	412	390	412	0.97
7	9	0.0035	0.22	11.9	5.7	1	23	418	440	418	440	0.98
8	9	0.044	2.8	8.4	0.0	2	23	476	497	475	497	0.96
9	9	0.0022	0.14	12.5	0.7	1	23	503	526	503	526	0.91

Sequence Information

Coding Sequence: ATGTTAACGTGgactttatttgttttgaatttaCAGGTGAGCAGCGACGATGGCATGCCCAGATTTATTTGCTTGGACTGTCGCCTGCTCTTCGAGCACTGCTATCGCTTCAAGCAGATGTGCAAGAATGCTGAGACGCTACTGCGTCAATTCCCGCTCACTGGCAAGTGGCCGGATGCGCTGGAGAAGCCCCGCGCTCCCATGGTGGCCAATCAGGCGGGCCGCAAGGTCGTCGAGCAGGTGGAGAAACAGCCGAAGAAACTGCTCAACTCCATGGTCAAGTCGCCCATCGTGCAGATCGAGAGCGTGCAGGTGCTGGAGACCAGTGCGCTGCCCAAGAAGCTGCTCAACTCGGCTGTCGGCAGCACCGCTGAGCCGGCCCAGCCGGCACGAAGCTCGCCGGCCAAACGCTCGAGCACGCAGTCGTATCAGGTGAAGGTGGAGAACAACCAGGAACTGTCCATGGACGACGTGCACAATTTGATAGCCGAACTGGAGGGTGGCGACACTGCGACAAGCGGAACGGAGGTGCCAGCCTCGCCGAGCAAACCCAAAGTACTTAACAAATCCTCGATGCGGCTGCTCAACAAGGGCAGCAGCGCGACGGTCGAGCCAcgcctggccacgccccaGATCAAGCACTACGAGGACGGCAATGTGGCACTCGTGACGGAAATACTGGATCCCAATGCACTCGATGCCGCCGCCGATCCCATCAAGAATGCCGCGCCCGTGGCCACCAATGTATTTCCTTGTCCGCACTGCGAGCGCTCGttcccgctgctgcagctgctggacatACACCAGGTGAACCATACGCGCGAGCGCAGCTTCCAGTGCCCCGAGTGCGACAAGAGCTTCTTCTCCAAGTACGATCTGCAGAAGCACAACTTCATACACACCGGCGAGCGGCCGTACAAgtgcagcatctgcagcgcGGCGTTCACACGgcgcgcgctgctgcatcgCCACGAGCGCATCCACACGGATGTGCCCAAGTTCATCTGCCTGTACTGCGAGAAGCCGTTCATCTCGCGCGAGGAGATGGAGAAGCATGCGGAGCGGCACACCAAGAAGCGGCCCTTCCAGTGCGGCATCTGCCAGAAGGCCTTTGCCTTTAAGCAGGGCCTGGAGCGGCACGAGGTCATACACAGCACAAACCTGCCCTTCCCGTGCCAGTACTGCACGCGCAGCTTCGTGACCGCCGGCAAGCTGGCGCGGCACCTGCAGGCGCACGCCGGCAAGCGCGCCTATCCCTGCAAGTACTGCTCCAAGTCGTATCTGCTGTCGCACCACCTGTCGCGGCATCTGCGCATGCACAAGCAGGCACCGGCCGCATCGTTCACGTGCAGCACGTGCAAGGACACGCACCAGACGTACGAAAGCCTGGTGGATCACTCGGCCATACACGCCAGCATCTCGCAGGTCTGTCCGCTCTGCAAGGCCAGCATCGCCGACTTCGACAGCGTGGAGCGGCACATGCAGGCGCACAAGGAGAGCGAGCGGCACGCCTGCGAGTTCTGCGACTACATCTTTCTCAGCTCCAGCCAGCTGCAGAAGCACATCGAGGACGATCATGTGGTGGACATGGTGCCCTACCAGAACGAGGGCGACTACACGTCCACAGCGGACGACAAGGAGGAGGGCGATCTGCTCGAGGAGCTGCTGGGCGAGGAGTCCCAGTCGAATGAGTCAGTAGCTCCGCCCAAGCCCAAGATGCGCAAGCTGAATCCGGAGCGTAAGTCAACCAAAGCGGAGGCCACCACGCCGGAGAGCATCAAGAAGGAGAGTAGTCCACGCGGACGAGCCGCTGGCTCCGCTACCAGCACACCCGAGGGCAGGCGCCAGATGCGCAGCCGGGAGAGCAAGGAGCGCTCCCTGAAAAGCGATTCGGGCAAGAAGGCGAGCAAGAGGCCtgcggaggagcagcagccaaagcagcaggccaccagcaggcagcgcaacgGGCGCACGGCAAGAAAATAG
Protein Sequence: MLTWTLFVLNLQVSSDDGMPRFICLDCRLLFEHCYRFKQMCKNAETLLRQFPLTGKWPDALEKPRAPMVANQAGRKVVEQVEKQPKKLLNSMVKSPIVQIESVQVLETSALPKKLLNSAVGSTAEPAQPARSSPAKRSSTQSYQVKVENNQELSMDDVHNLIAELEGGDTATSGTEVPASPSKPKVLNKSSMRLLNKGSSATVEPRLATPQIKHYEDGNVALVTEILDPNALDAAADPIKNAAPVATNVFPCPHCERSFPLLQLLDIHQVNHTRERSFQCPECDKSFFSKYDLQKHNFIHTGERPYKCSICSAAFTRRALLHRHERIHTDVPKFICLYCEKPFISREEMEKHAERHTKKRPFQCGICQKAFAFKQGLERHEVIHSTNLPFPCQYCTRSFVTAGKLARHLQAHAGKRAYPCKYCSKSYLLSHHLSRHLRMHKQAPAASFTCSTCKDTHQTYESLVDHSAIHASISQVCPLCKASIADFDSVERHMQAHKESERHACEFCDYIFLSSSQLQKHIEDDHVVDMVPYQNEGDYTSTADDKEEGDLLEELLGEESQSNESVAPPKPKMRKLNPERKSTKAEATTPESIKKESSPRGRAAGSATSTPEGRRQMRSRESKERSLKSDSGKKASKRPAEEQQPKQQATSRQRNGRTARK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01557769;
90% Identity: -
80% Identity: -